RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 TMED8Q6PL24 325 aaPredicted RBP16.05■□□□□ 0.16
SPG7-207ENST00000563218 TMEM179Q6ZVK1 233 aa16.05■□□□□ 0.16
SPG7-207ENST00000563218 NCAPG2Q86XI2 1143 aa16.05■□□□□ 0.16
SPG7-207ENST00000563218 CLASRPQ8N2M8 674 aaKnown RBP16.05■□□□□ 0.16
SPG7-207ENST00000563218 SHCBP1Q8NEM2 672 aa16.05■□□□□ 0.16
SPG7-207ENST00000563218 KIF1BPQ96EK5 621 aa16.05■□□□□ 0.16
SPG7-207ENST00000563218 DCTPP1Q9H773 170 aa16.05■□□□□ 0.16
SPG7-207ENST00000563218 FBXO28Q9NVF7 368 aa16.05■□□□□ 0.16
SPG7-207ENST00000563218 PAG1Q9NWQ8 432 aa16.05■□□□□ 0.16
SPG7-207ENST00000563218 GBF1Q92538 1859 aa16.05■□□□□ 0.16
SPG7-207ENST00000563218 MSCO60682 206 aa16.04■□□□□ 0.16
SPG7-207ENST00000563218 MYCNP04198 464 aaPredicted RBP16.04■□□□□ 0.16
SPG7-207ENST00000563218 IFIT2P09913 472 aaKnown RBP16.04■□□□□ 0.16
SPG7-207ENST00000563218 TMEM132BQ14DG7 1078 aa16.04■□□□□ 0.16
SPG7-207ENST00000563218 HSP90AB4PQ58FF6 505 aa16.04■□□□□ 0.16
SPG7-207ENST00000563218 FAM47AQ5JRC9 791 aa16.04■□□□□ 0.16
SPG7-207ENST00000563218 VCPKMTQ9H867 229 aa16.04■□□□□ 0.16
SPG7-207ENST00000563218 HOXC10Q9NYD6 342 aa16.04■□□□□ 0.16
SPG7-207ENST00000563218 ZBTB47Q9UFB7 747 aaPredicted RBP16.04■□□□□ 0.16
SPG7-207ENST00000563218 SPTBN5Q9NRC6 3674 aaKnown RBP16.03■□□□□ 0.16
SPG7-207ENST00000563218 LRRC37A2A6NM11 1700 aa16.03■□□□□ 0.16
SPG7-207ENST00000563218 CDK8P49336 464 aa16.03■□□□□ 0.16
SPG7-207ENST00000563218 NUCB1Q02818 461 aa16.03■□□□□ 0.16
SPG7-207ENST00000563218 TRIM60Q495X7 471 aa16.03■□□□□ 0.16
SPG7-207ENST00000563218 C9orf50Q5SZB4 431 aa16.03■□□□□ 0.16
SPG7-207ENST00000563218 ANKRD45Q5TZF3 282 aa16.03■□□□□ 0.16
SPG7-207ENST00000563218 SLC39A5Q6ZMH5 540 aa16.03■□□□□ 0.16
SPG7-207ENST00000563218 MAML3Q96JK9 1138 aa16.03■□□□□ 0.16
SPG7-207ENST00000563218 SWAP70Q9UH65 585 aa16.03■□□□□ 0.16
SPG7-207ENST00000563218 TMX2Q9Y320 296 aa16.03■□□□□ 0.16
SPG7-207ENST00000563218 LCTP09848 1927 aa16.03■□□□□ 0.16
SPG7-207ENST00000563218 SEPT4O43236 478 aa16.02■□□□□ 0.16
SPG7-207ENST00000563218 LRRC41Q15345 812 aa16.02■□□□□ 0.16
SPG7-207ENST00000563218 C12orf60Q5U649 245 aa16.02■□□□□ 0.16
SPG7-207ENST00000563218 SH3RF1Q7Z6J0 888 aa16.02■□□□□ 0.16
SPG7-207ENST00000563218 SKAP1Q86WV1 359 aa16.02■□□□□ 0.16
SPG7-207ENST00000563218 FERMT2Q96AC1 680 aa16.02■□□□□ 0.16
SPG7-207ENST00000563218 LENG1Q96BZ8 264 aaPredicted RBP16.02■□□□□ 0.16
SPG7-207ENST00000563218 LBHD1Q9BQE6 289 aaPredicted RBP16.02■□□□□ 0.16
SPG7-207ENST00000563218 ARHGEF10LQ9HCE6 1279 aa16.02■□□□□ 0.16
SPG7-207ENST00000563218 PRDM5Q9NQX1 630 aaPredicted RBP16.02■□□□□ 0.16
SPG7-207ENST00000563218 USP17L12C9JPN9 530 aa16.01■□□□□ 0.15
SPG7-207ENST00000563218 KBTBD13C9JR72 458 aa16.01■□□□□ 0.15
SPG7-207ENST00000563218 USP17L21D6R901 530 aa16.01■□□□□ 0.15
SPG7-207ENST00000563218 POTEB2H3BUK9 544 aa16.01■□□□□ 0.15
SPG7-207ENST00000563218 WDR46O15213 610 aaKnown RBP16.01■□□□□ 0.15
SPG7-207ENST00000563218 STRNO43815 780 aa16.01■□□□□ 0.15
SPG7-207ENST00000563218 SMARCA5O60264 1052 aaPredicted RBP16.01■□□□□ 0.15
SPG7-207ENST00000563218 PGK2P07205 417 aa16.01■□□□□ 0.15
SPG7-207ENST00000563218 EEF2P13639 858 aaKnown RBP16.01■□□□□ 0.15
SPG7-207ENST00000563218 TAL1P17542 331 aaPredicted RBP16.01■□□□□ 0.15
SPG7-207ENST00000563218 ADCYAP1R1P41586 468 aa16.01■□□□□ 0.15
SPG7-207ENST00000563218 SHHQ15465 462 aa16.01■□□□□ 0.15
SPG7-207ENST00000563218 C16orf86Q6ZW13 317 aa16.01■□□□□ 0.15
SPG7-207ENST00000563218 CHD1LQ86WJ1 897 aa16.01■□□□□ 0.15
SPG7-207ENST00000563218 MB21D1Q8N884 522 aa16.01■□□□□ 0.15
SPG7-207ENST00000563218 BADQ92934 168 aa16.01■□□□□ 0.15
SPG7-207ENST00000563218 PUS7LQ9H0K6 701 aaKnown RBP16.01■□□□□ 0.15
SPG7-207ENST00000563218 MROH8Q9H579 483 aa16.01■□□□□ 0.15
SPG7-207ENST00000563218 PDLIM7Q9NR12 457 aa16.01■□□□□ 0.15
SPG7-207ENST00000563218 TRIM43BA6NCK2 446 aa16■□□□□ 0.15
SPG7-207ENST00000563218 ATP5JP18859 108 aa16■□□□□ 0.15
SPG7-207ENST00000563218 SNX17Q15036 470 aa16■□□□□ 0.15
SPG7-207ENST00000563218 FAM83BQ5T0W9 1011 aa16■□□□□ 0.15
SPG7-207ENST00000563218 STK11IPQ8N1F8 1099 aa16■□□□□ 0.15
SPG7-207ENST00000563218 REPS2Q8NFH8 660 aa16■□□□□ 0.15
SPG7-207ENST00000563218 TRIM43Q96BQ3 446 aaPredicted RBP16■□□□□ 0.15
SPG7-207ENST00000563218 HAUS7Q99871 368 aa16■□□□□ 0.15
SPG7-207ENST00000563218 GNL3Q9BVP2 549 aaKnown RBP eCLIP16■□□□□ 0.15
SPG7-207ENST00000563218 ATP8A2Q9NTI2 1148 aa16■□□□□ 0.15
SPG7-207ENST00000563218 ITGB8P26012 769 aa15.99■□□□□ 0.15
SPG7-207ENST00000563218 CTR9Q6PD62 1173 aa15.99■□□□□ 0.15
SPG7-207ENST00000563218 ABRAQ8N0Z2 381 aa15.99■□□□□ 0.15
SPG7-207ENST00000563218 ARRDC4Q8NCT1 418 aa15.99■□□□□ 0.15
SPG7-207ENST00000563218 MMP19Q99542 508 aa15.99■□□□□ 0.15
SPG7-207ENST00000563218 NUP88Q99567 741 aaPredicted RBP15.99■□□□□ 0.15
SPG7-207ENST00000563218 LNPKQ9C0E8 428 aa15.99■□□□□ 0.15
SPG7-207ENST00000563218 PRKAG2Q9UGJ0 569 aa15.99■□□□□ 0.15
SPG7-207ENST00000563218 ADAMTS5Q9UNA0 930 aa15.99■□□□□ 0.15
SPG7-207ENST00000563218 SLC4A4Q9Y6R1 1079 aa15.99■□□□□ 0.15
SPG7-207ENST00000563218 RAD21O60216 631 aa15.98■□□□□ 0.15
SPG7-207ENST00000563218 RAB11FIP3O75154 756 aa15.98■□□□□ 0.15
SPG7-207ENST00000563218 PGK1P00558 417 aa15.98■□□□□ 0.15
SPG7-207ENST00000563218 FCER1AP12319 257 aa15.98■□□□□ 0.15
SPG7-207ENST00000563218 SH2D4AQ9H788 454 aa15.98■□□□□ 0.15
SPG7-207ENST00000563218 ZNF214Q9UL59 606 aaPredicted RBP15.98■□□□□ 0.15
SPG7-207ENST00000563218 VWA5AO00534 786 aa15.97■□□□□ 0.15
SPG7-207ENST00000563218 TLE2Q04725 743 aa15.97■□□□□ 0.15
SPG7-207ENST00000563218 UBE3CQ15386 1083 aa15.97■□□□□ 0.15
SPG7-207ENST00000563218 ZNF792Q3KQV3 632 aa15.97■□□□□ 0.15
SPG7-207ENST00000563218 FAM109BQ6ICB4 259 aaPredicted RBP15.97■□□□□ 0.15
SPG7-207ENST00000563218 RIOX2Q8IUF8 465 aa15.97■□□□□ 0.15
SPG7-207ENST00000563218 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.97■□□□□ 0.15
SPG7-207ENST00000563218 CCDC17Q96LX7 622 aa15.97■□□□□ 0.15
SPG7-207ENST00000563218 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.97■□□□□ 0.154e-7■■□□□ 13.9
SPG7-207ENST00000563218 XPNPEP3Q9NQH7 507 aa15.97■□□□□ 0.15
SPG7-207ENST00000563218 PPP1R9AQ9ULJ8 1098 aa15.97■□□□□ 0.15
SPG7-207ENST00000563218 SLC25A27O95847 323 aa15.96■□□□□ 0.15
SPG7-207ENST00000563218 ZNF865P0CJ78 1059 aaPredicted RBP15.96■□□□□ 0.15
SPG7-207ENST00000563218 PDE4AP27815 886 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms