RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 MKNK2Q9HBH9 465 aa8.5□□□□□ -1.05
LINC00557-201ENST00000563184 LRRC4CQ9HCJ2 640 aa8.5□□□□□ -1.05
LINC00557-201ENST00000563184 GP6Q9HCN6 339 aa8.5□□□□□ -1.05
LINC00557-201ENST00000563184 APEX2Q9UBZ4 518 aa8.5□□□□□ -1.05
LINC00557-201ENST00000563184 RNF112Q9ULX5 631 aa8.5□□□□□ -1.05
LINC00557-201ENST00000563184 SHISA3A0PJX4 238 aa8.49□□□□□ -1.05
LINC00557-201ENST00000563184 ANKRD34BA5PLL1 514 aa8.49□□□□□ -1.05
LINC00557-201ENST00000563184 GNAT3A8MTJ3 354 aa8.49□□□□□ -1.05
LINC00557-201ENST00000563184 ZNF143P52747 638 aaPredicted RBP8.49□□□□□ -1.05
LINC00557-201ENST00000563184 SPACA3Q8IXA5 215 aa8.49□□□□□ -1.05
LINC00557-201ENST00000563184 DNAJC7Q99615 494 aa8.49□□□□□ -1.05
LINC00557-201ENST00000563184 ZFP64Q9NPA5 681 aa8.49□□□□□ -1.05
LINC00557-201ENST00000563184 PIM2Q9P1W9 311 aa8.49□□□□□ -1.05
LINC00557-201ENST00000563184 KCNH3Q9ULD8 1083 aa8.49□□□□□ -1.05
LINC00557-201ENST00000563184 LEMD3Q9Y2U8 911 aa8.49□□□□□ -1.05
LINC00557-201ENST00000563184 PCDHB12Q9Y5F1 795 aa8.49□□□□□ -1.05
LINC00557-201ENST00000563184 ST14Q9Y5Y6 855 aa8.49□□□□□ -1.05
LINC00557-201ENST00000563184 TGFB1P01137 390 aa8.48□□□□□ -1.05
LINC00557-201ENST00000563184 CEACAM5P06731 702 aa8.48□□□□□ -1.05
LINC00557-201ENST00000563184 SRFP11831 508 aa8.48□□□□□ -1.05
LINC00557-201ENST00000563184 ITIH2P19823 946 aa8.48□□□□□ -1.05
LINC00557-201ENST00000563184 ZNF445P59923 1031 aa8.48□□□□□ -1.05
LINC00557-201ENST00000563184 JAZF1Q86VZ6 243 aa8.48□□□□□ -1.05
LINC00557-201ENST00000563184 PLD6Q8N2A8 252 aaKnown RBP8.48□□□□□ -1.05
LINC00557-201ENST00000563184 PIWIL2Q8TC59 973 aaKnown RBP8.48□□□□□ -1.05
LINC00557-201ENST00000563184 GFOD1Q9NXC2 390 aa8.48□□□□□ -1.05
LINC00557-201ENST00000563184 ZMYM5Q9UJ78 669 aa8.48□□□□□ -1.05
LINC00557-201ENST00000563184 FBXL21Q9UKT6 434 aa8.48□□□□□ -1.05
LINC00557-201ENST00000563184 CYP26A1O43174 497 aa8.47□□□□□ -1.05
LINC00557-201ENST00000563184 DIAPH1O60610 1272 aaKnown RBP8.47□□□□□ -1.05
LINC00557-201ENST00000563184 FOSL1P15407 271 aa8.47□□□□□ -1.05
LINC00557-201ENST00000563184 HOXA10P31260 410 aaPredicted RBP8.47□□□□□ -1.05
LINC00557-201ENST00000563184 MTERF2Q49AM1 385 aa8.47□□□□□ -1.05
LINC00557-201ENST00000563184 LILRB2Q8N423 598 aa8.47□□□□□ -1.05
LINC00557-201ENST00000563184 APBA2Q99767 749 aa8.47□□□□□ -1.05
LINC00557-201ENST00000563184 LGR4Q9BXB1 951 aa8.47□□□□□ -1.05
LINC00557-201ENST00000563184 DUSP15Q9H1R2 295 aaPredicted RBP8.47□□□□□ -1.05
LINC00557-201ENST00000563184 EPN3Q9H201 632 aa8.47□□□□□ -1.05
LINC00557-201ENST00000563184 WHRNQ9P202 907 aa8.47□□□□□ -1.05
LINC00557-201ENST00000563184 ZC3H7BQ9UGR2 993 aaKnown RBP8.47□□□□□ -1.05
LINC00557-201ENST00000563184 MINPP1Q9UNW1 487 aa8.47□□□□□ -1.05
LINC00557-201ENST00000563184 SIGLEC6O43699 453 aa8.46□□□□□ -1.06
LINC00557-201ENST00000563184 ITGA4P13612 1032 aa8.46□□□□□ -1.06
LINC00557-201ENST00000563184 IFRD2Q12894 506 aaPredicted RBP8.46□□□□□ -1.06
LINC00557-201ENST00000563184 NMIQ13287 307 aaPredicted RBP8.46□□□□□ -1.06
LINC00557-201ENST00000563184 TCEAL1Q15170 157 aa8.46□□□□□ -1.06
LINC00557-201ENST00000563184 BRF1Q92994 677 aa8.46□□□□□ -1.06
LINC00557-201ENST00000563184 ZNF669Q96BR6 464 aaPredicted RBP8.46□□□□□ -1.06
LINC00557-201ENST00000563184 GPR62Q9BZJ7 368 aa8.46□□□□□ -1.06
LINC00557-201ENST00000563184 PRR13Q9NZ81 148 aa8.46□□□□□ -1.06
LINC00557-201ENST00000563184 PFDN2Q9UHV9 154 aa8.46□□□□□ -1.06
LINC00557-201ENST00000563184 TBX22Q9Y458 520 aa8.46□□□□□ -1.06
LINC00557-201ENST00000563184 WASH4PA8MWX3 477 aa8.45□□□□□ -1.06
LINC00557-201ENST00000563184 FAM155AB1AL88 458 aaPredicted RBP8.45□□□□□ -1.06
LINC00557-201ENST00000563184 PRAMEF1O95521 474 aa8.45□□□□□ -1.06
LINC00557-201ENST00000563184 NAT2P11245 290 aa8.45□□□□□ -1.06
LINC00557-201ENST00000563184 SV2CQ496J9 727 aa8.45□□□□□ -1.06
LINC00557-201ENST00000563184 ARHGAP27Q6ZUM4 889 aa8.45□□□□□ -1.06
LINC00557-201ENST00000563184 ADCY4Q8NFM4 1077 aa8.45□□□□□ -1.06
LINC00557-201ENST00000563184 NETO1Q8TDF5 533 aa8.45□□□□□ -1.06
LINC00557-201ENST00000563184 HDAC8Q9BY41 377 aa8.45□□□□□ -1.06
LINC00557-201ENST00000563184 GBP3Q9H0R5 595 aa8.45□□□□□ -1.06
LINC00557-201ENST00000563184 FHOD1Q9Y613 1164 aa8.45□□□□□ -1.06
LINC00557-201ENST00000563184 A0A087WZG4 1122 aa8.44□□□□□ -1.06
LINC00557-201ENST00000563184 IFI16Q16666 785 aaKnown RBP8.44□□□□□ -1.06
LINC00557-201ENST00000563184 CDKAL1Q5VV42 579 aa8.44□□□□□ -1.06
LINC00557-201ENST00000563184 ADAT2Q7Z6V5 191 aaKnown RBP8.44□□□□□ -1.06
LINC00557-201ENST00000563184 JMYQ8N9B5 988 aa8.44□□□□□ -1.06
LINC00557-201ENST00000563184 SYTL5Q8TDW5 730 aaPredicted RBP8.44□□□□□ -1.06
LINC00557-201ENST00000563184 RCC1LQ96I51 464 aaKnown RBP8.44□□□□□ -1.06
LINC00557-201ENST00000563184 RNPC3Q96LT9 517 aaKnown RBP8.44□□□□□ -1.06
LINC00557-201ENST00000563184 HSPA12BQ96MM6 686 aa8.44□□□□□ -1.06
LINC00557-201ENST00000563184 KANSL2Q9H9L4 492 aa8.44□□□□□ -1.06
LINC00557-201ENST00000563184 SEMA3GQ9NS98 782 aa8.44□□□□□ -1.06
LINC00557-201ENST00000563184 A0A1W2PQU0 124 aa8.43□□□□□ -1.06
LINC00557-201ENST00000563184 H3BS24 57 aa8.43□□□□□ -1.06
LINC00557-201ENST00000563184 PPM1BO75688 479 aa8.43□□□□□ -1.06
LINC00557-201ENST00000563184 CAPNS1P04632 268 aa8.43□□□□□ -1.06
LINC00557-201ENST00000563184 ITGAVP06756 1048 aa8.43□□□□□ -1.06
LINC00557-201ENST00000563184 CTSKP43235 329 aa8.43□□□□□ -1.06
LINC00557-201ENST00000563184 CLCN7P51798 805 aa8.43□□□□□ -1.06
LINC00557-201ENST00000563184 MSMPQ1L6U9 139 aa8.43□□□□□ -1.06
LINC00557-201ENST00000563184 ZNF227Q86WZ6 799 aa8.43□□□□□ -1.06
LINC00557-201ENST00000563184 NLGN1Q8N2Q7 840 aa8.43□□□□□ -1.06
LINC00557-201ENST00000563184 ARHGEF39Q8N4T4 335 aa8.43□□□□□ -1.06
LINC00557-201ENST00000563184 FIBCD1Q8N539 461 aa8.43□□□□□ -1.06
LINC00557-201ENST00000563184 MRGPRX3Q96LB0 322 aa8.43□□□□□ -1.06
LINC00557-201ENST00000563184 CHST7Q9NS84 486 aa8.43□□□□□ -1.06
LINC00557-201ENST00000563184 CGGBP1Q9UFW8 167 aaPredicted RBP8.43□□□□□ -1.06
LINC00557-201ENST00000563184 SUGT1Q9Y2Z0 365 aa8.43□□□□□ -1.06
LINC00557-201ENST00000563184 MRPL42Q9Y6G3 142 aaKnown RBP8.43□□□□□ -1.06
LINC00557-201ENST00000563184 TLDC2A0PJX2 215 aa8.42□□□□□ -1.06
LINC00557-201ENST00000563184 TBX1O43435 398 aa8.42□□□□□ -1.06
LINC00557-201ENST00000563184 ADCY3O60266 1144 aa8.42□□□□□ -1.06
LINC00557-201ENST00000563184 SSRP1Q08945 709 aaKnown RBP8.42□□□□□ -1.06
LINC00557-201ENST00000563184 NOL9Q5SY16 702 aaKnown RBP8.42□□□□□ -1.06
LINC00557-201ENST00000563184 LRRN4CLQ8ND94 238 aa8.42□□□□□ -1.06
LINC00557-201ENST00000563184 BVESQ8NE79 360 aa8.42□□□□□ -1.06
LINC00557-201ENST00000563184 SGSM3Q96HU1 749 aa8.42□□□□□ -1.06
LINC00557-201ENST00000563184 SPATA9Q9BWV2 254 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms