RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 SIAH1Q8IUQ4 282 aa11.9□□□□□ -0.5
USP3-219ENST00000561326 GMCL1Q96IK5 515 aa11.9□□□□□ -0.5
USP3-219ENST00000561326 AS3MTQ9HBK9 375 aa11.9□□□□□ -0.5
USP3-219ENST00000561326 BRMS1Q9HCU9 246 aa11.9□□□□□ -0.5
USP3-219ENST00000561326 GPCPD1Q9NPB8 672 aa11.9□□□□□ -0.5
USP3-219ENST00000561326 SH3GLB2Q9NR46 395 aa11.9□□□□□ -0.5
USP3-219ENST00000561326 PICK1Q9NRD5 415 aa11.9□□□□□ -0.5
USP3-219ENST00000561326 ZNF112Q9UJU3 913 aa11.9□□□□□ -0.5
USP3-219ENST00000561326 CLEC11AQ9Y240 323 aa11.9□□□□□ -0.5
USP3-219ENST00000561326 TMX2Q9Y320 296 aa11.9□□□□□ -0.5
USP3-219ENST00000561326 CNTNAP5Q8WYK1 1306 aa11.89□□□□□ -0.51
USP3-219ENST00000561326 BMP3P12645 472 aa11.89□□□□□ -0.51
USP3-219ENST00000561326 CALML3P27482 149 aa11.89□□□□□ -0.51
USP3-219ENST00000561326 JAG1P78504 1218 aa11.89□□□□□ -0.51
USP3-219ENST00000561326 PRAMEF18Q5VWM3 479 aa11.89□□□□□ -0.51
USP3-219ENST00000561326 FERMT3Q86UX7 667 aa11.89□□□□□ -0.51
USP3-219ENST00000561326 SCYL3Q8IZE3 742 aa11.89□□□□□ -0.51
USP3-219ENST00000561326 CCDC12Q8WUD4 166 aaPredicted RBP11.89□□□□□ -0.51
USP3-219ENST00000561326 ZNF396Q96N95 335 aaPredicted RBP11.89□□□□□ -0.51
USP3-219ENST00000561326 AIFM3Q96NN9 605 aa11.89□□□□□ -0.51
USP3-219ENST00000561326 WRNIP1Q96S55 665 aa11.89□□□□□ -0.51
USP3-219ENST00000561326 FEZ1Q99689 392 aa11.89□□□□□ -0.51
USP3-219ENST00000561326 RIOX1Q9H6W3 641 aa11.89□□□□□ -0.51
USP3-219ENST00000561326 VAT1LQ9HCJ6 419 aa11.89□□□□□ -0.51
USP3-219ENST00000561326 CFAP45Q9UL16 551 aa11.89□□□□□ -0.51
USP3-219ENST00000561326 FRMPD2Q68DX3 1309 aaPredicted RBP11.88□□□□□ -0.51
USP3-219ENST00000561326 hCG_1984214I3L0E3 225 aa11.88□□□□□ -0.51
USP3-219ENST00000561326 NCLP19338 710 aaKnown RBP11.88□□□□□ -0.51
USP3-219ENST00000561326 NLRP5P59047 1200 aa11.88□□□□□ -0.51
USP3-219ENST00000561326 KRT85P78386 507 aa11.88□□□□□ -0.51
USP3-219ENST00000561326 TRAF1Q13077 416 aa11.88□□□□□ -0.51
USP3-219ENST00000561326 IKQ13123 557 aaPredicted RBP11.88□□□□□ -0.51
USP3-219ENST00000561326 PKN1Q16512 942 aa11.88□□□□□ -0.51
USP3-219ENST00000561326 SHROOM1Q2M3G4 852 aaPredicted RBP11.88□□□□□ -0.51
USP3-219ENST00000561326 SKOR2Q2VWA4 1001 aaPredicted RBP11.88□□□□□ -0.51
USP3-219ENST00000561326 OTUD7BQ6GQQ9 843 aa11.88□□□□□ -0.51
USP3-219ENST00000561326 GALNT17Q6IS24 598 aa11.88□□□□□ -0.51
USP3-219ENST00000561326 ZNF713Q8N859 430 aaPredicted RBP11.88□□□□□ -0.51
USP3-219ENST00000561326 CCDC148Q8NFR7 591 aa11.88□□□□□ -0.51
USP3-219ENST00000561326 CHURC1Q8WUH1 139 aa11.88□□□□□ -0.51
USP3-219ENST00000561326 PIBF1Q8WXW3 757 aa11.88□□□□□ -0.51
USP3-219ENST00000561326 KLRG1Q96E93 195 aa11.88□□□□□ -0.51
USP3-219ENST00000561326 SCAND2PQ9GZW5 306 aaPredicted RBP11.88□□□□□ -0.51
USP3-219ENST00000561326 UBA5Q9GZZ9 404 aa11.88□□□□□ -0.51
USP3-219ENST00000561326 SRCAPQ6ZRS2 3230 aa11.88□□□□□ -0.51
USP3-219ENST00000561326 PNMA6FA0A0J9YX94 578 aa11.87□□□□□ -0.51
USP3-219ENST00000561326 hCG_1642624A0A1W2PR95 340 aa11.87□□□□□ -0.51
USP3-219ENST00000561326 A0A1W2PRG0 241 aa11.87□□□□□ -0.51
USP3-219ENST00000561326 POTECB2RU33 542 aa11.87□□□□□ -0.51
USP3-219ENST00000561326 USP17L10C9JJH3 530 aa11.87□□□□□ -0.51
USP3-219ENST00000561326 CYTH3O43739 400 aa11.87□□□□□ -0.51
USP3-219ENST00000561326 USP2O75604 605 aaPredicted RBP11.87□□□□□ -0.51
USP3-219ENST00000561326 NDUFB10O96000 172 aa11.87□□□□□ -0.51
USP3-219ENST00000561326 MMP1P03956 469 aa11.87□□□□□ -0.51
USP3-219ENST00000561326 INPP5BP32019 993 aa11.87□□□□□ -0.51
USP3-219ENST00000561326 IREB2P48200 963 aaKnown RBP11.87□□□□□ -0.51
USP3-219ENST00000561326 USP14P54578 494 aa11.87□□□□□ -0.51
USP3-219ENST00000561326 MAP3K9P80192 1104 aa11.87□□□□□ -0.51
USP3-219ENST00000561326 RESTQ13127 1097 aa11.87□□□□□ -0.51
USP3-219ENST00000561326 FOXD4L6Q3SYB3 417 aaPredicted RBP11.87□□□□□ -0.51
USP3-219ENST00000561326 FOXD4L3Q6VB84 417 aaPredicted RBP11.87□□□□□ -0.51
USP3-219ENST00000561326 KCTD1Q719H9 257 aa11.87□□□□□ -0.51
USP3-219ENST00000561326 ACER1Q8TDN7 264 aa11.87□□□□□ -0.51
USP3-219ENST00000561326 LPAR1Q92633 364 aa11.87□□□□□ -0.51
USP3-219ENST00000561326 WDR18Q9BV38 432 aa11.87□□□□□ -0.51
USP3-219ENST00000561326 KIAA1683Q9H0B3 1180 aa11.87□□□□□ -0.51
USP3-219ENST00000561326 FOXP1Q9H334 677 aaPredicted RBP11.87□□□□□ -0.51
USP3-219ENST00000561326 VCPKMTQ9H867 229 aa11.87□□□□□ -0.51
USP3-219ENST00000561326 CSADQ9Y600 493 aa11.87□□□□□ -0.51
USP3-219ENST00000561326 C19orf81C9J6K1 198 aa11.86□□□□□ -0.51
USP3-219ENST00000561326 TMEM232C9JQI7 657 aa11.86□□□□□ -0.51
USP3-219ENST00000561326 ADM5C9JUS6 153 aa11.86□□□□□ -0.51
USP3-219ENST00000561326 U2AF2P26368 475 aaKnown RBP eCLIP11.86□□□□□ -0.514e-9■■■■□ 20.4
USP3-219ENST00000561326 KRT2P35908 639 aa11.86□□□□□ -0.51
USP3-219ENST00000561326 ECE1P42892 770 aa11.86□□□□□ -0.51
USP3-219ENST00000561326 KIF23Q02241 960 aaPredicted RBP11.86□□□□□ -0.51
USP3-219ENST00000561326 NBR1Q14596 966 aa11.86□□□□□ -0.51
USP3-219ENST00000561326 NOL9Q5SY16 702 aaKnown RBP11.86□□□□□ -0.51
USP3-219ENST00000561326 HEATR3Q7Z4Q2 680 aa11.86□□□□□ -0.51
USP3-219ENST00000561326 FAM160B2Q86V87 743 aa11.86□□□□□ -0.51
USP3-219ENST00000561326 HOMER1Q86YM7 354 aa11.86□□□□□ -0.51
USP3-219ENST00000561326 ADGRF4Q8IZF3 695 aa11.86□□□□□ -0.51
USP3-219ENST00000561326 ZKSCAN4Q969J2 545 aaPredicted RBP11.86□□□□□ -0.51
USP3-219ENST00000561326 CDCA5Q96FF9 252 aa11.86□□□□□ -0.51
USP3-219ENST00000561326 PIGSQ96S52 555 aa11.86□□□□□ -0.51
USP3-219ENST00000561326 PHF20Q9BVI0 1012 aa11.86□□□□□ -0.51
USP3-219ENST00000561326 RRAGCQ9HB90 399 aa11.86□□□□□ -0.51
USP3-219ENST00000561326 GJB4Q9NTQ9 266 aa11.86□□□□□ -0.51
USP3-219ENST00000561326 BARHL2Q9NY43 387 aa11.86□□□□□ -0.51
USP3-219ENST00000561326 VPS54Q9P1Q0 977 aa11.86□□□□□ -0.51
USP3-219ENST00000561326 KCNJ14Q9UNX9 436 aa11.86□□□□□ -0.51
USP3-219ENST00000561326 PHIPQ8WWQ0 1821 aa11.86□□□□□ -0.51
USP3-219ENST00000561326 ZBTB5O15062 677 aa11.85□□□□□ -0.51
USP3-219ENST00000561326 PLA2G6O60733 806 aa11.85□□□□□ -0.51
USP3-219ENST00000561326 PRPF40AO75400 957 aaKnown RBP11.85□□□□□ -0.51
USP3-219ENST00000561326 PTPRAP18433 802 aa11.85□□□□□ -0.51
USP3-219ENST00000561326 GNA11P29992 359 aa11.85□□□□□ -0.51
USP3-219ENST00000561326 SLC16A2P36021 539 aa11.85□□□□□ -0.51
USP3-219ENST00000561326 STAT2P52630 851 aa11.85□□□□□ -0.51
USP3-219ENST00000561326 NAPAP54920 295 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms