RNA–Protein interactions for RNA: ENST00000561278.1

SHF-211, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-211ENST00000561278 IFNL3Q8IZI9 196 aa14.92□□□□□ -0.02
SHF-211ENST00000561278 ZNF444Q8N0Y2 327 aaPredicted RBP14.92□□□□□ -0.02
SHF-211ENST00000561278 SHCBP1Q8NEM2 672 aa14.92□□□□□ -0.02
SHF-211ENST00000561278 NAPBQ9H115 298 aa14.92□□□□□ -0.02
SHF-211ENST00000561278 FBXO28Q9NVF7 368 aa14.92□□□□□ -0.02
SHF-211ENST00000561278 ZNF236Q9UL36 1845 aa14.92□□□□□ -0.02
SHF-211ENST00000561278 STRNO43815 780 aa14.91□□□□□ -0.02
SHF-211ENST00000561278 HOXC6P09630 235 aa14.91□□□□□ -0.02
SHF-211ENST00000561278 NUP88Q99567 741 aaPredicted RBP14.91□□□□□ -0.02
SHF-211ENST00000561278 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.91□□□□□ -0.02
SHF-211ENST00000561278 MROH8Q9H579 483 aa14.91□□□□□ -0.02
SHF-211ENST00000561278 SLC5A4Q9NY91 659 aa14.91□□□□□ -0.02
SHF-211ENST00000561278 ISY1Q9ULR0 285 aaKnown RBP14.91□□□□□ -0.02
SHF-211ENST00000561278 SLC3A2P08195 630 aaKnown RBP14.9□□□□□ -0.02
SHF-211ENST00000561278 TSPY3P0CV98 308 aa14.9□□□□□ -0.02
SHF-211ENST00000561278 TSPY8P0CW00 308 aa14.9□□□□□ -0.02
SHF-211ENST00000561278 FXR1P51114 621 aaKnown RBP eCLIP14.9□□□□□ -0.02
SHF-211ENST00000561278 PDE4BQ07343 736 aa14.9□□□□□ -0.02
SHF-211ENST00000561278 TMEM132BQ14DG7 1078 aa14.9□□□□□ -0.02
SHF-211ENST00000561278 ZMYM1Q5SVZ6 1142 aa14.9□□□□□ -0.02
SHF-211ENST00000561278 CCDC129Q6ZRS4 1044 aa14.9□□□□□ -0.02
SHF-211ENST00000561278 NYAP2Q9P242 653 aa14.9□□□□□ -0.02
SHF-211ENST00000561278 RBM27Q9P2N5 1060 aaKnown RBP14.9□□□□□ -0.02
SHF-211ENST00000561278 CLIP2Q9UDT6 1046 aa14.9□□□□□ -0.02
SHF-211ENST00000561278 PPP1R9AQ9ULJ8 1098 aa14.9□□□□□ -0.02
SHF-211ENST00000561278 RLFQ13129 1914 aa14.9□□□□□ -0.02
SHF-211ENST00000561278 GREB1LQ9C091 1923 aaPredicted RBP14.9□□□□□ -0.02
SHF-211ENST00000561278 SALL3Q9BXA9 1300 aa14.9□□□□□ -0.02
SHF-211ENST00000561278 VWA5AO00534 786 aa14.89□□□□□ -0.03
SHF-211ENST00000561278 SLC25A27O95847 323 aa14.89□□□□□ -0.03
SHF-211ENST00000561278 FCER1AP12319 257 aa14.89□□□□□ -0.03
SHF-211ENST00000561278 MNX1P50219 401 aaPredicted RBP14.89□□□□□ -0.03
SHF-211ENST00000561278 PPARAQ07869 468 aa14.89□□□□□ -0.03
SHF-211ENST00000561278 HDAC1Q13547 482 aaPredicted RBP14.89□□□□□ -0.03
SHF-211ENST00000561278 LHX8Q68G74 356 aa14.89□□□□□ -0.03
SHF-211ENST00000561278 MMP19Q99542 508 aa14.89□□□□□ -0.03
SHF-211ENST00000561278 SLF1Q9BQI6 1058 aa14.89□□□□□ -0.03
SHF-211ENST00000561278 DDX20Q9UHI6 824 aaKnown RBP14.89□□□□□ -0.03
SHF-211ENST00000561278 ZMYND8Q9ULU4 1186 aaPredicted RBP14.89□□□□□ -0.03
SHF-211ENST00000561278 CTDP1Q9Y5B0 961 aaPredicted RBP14.89□□□□□ -0.03
SHF-211ENST00000561278 PARP14Q460N5 1801 aa14.89□□□□□ -0.03
SHF-211ENST00000561278 PFASO15067 1338 aa14.89□□□□□ -0.03
SHF-211ENST00000561278 F5H6K3 240 aa14.88□□□□□ -0.03
SHF-211ENST00000561278 MSCO60682 206 aa14.88□□□□□ -0.03
SHF-211ENST00000561278 COBLO75128 1261 aa14.88□□□□□ -0.03
SHF-211ENST00000561278 NDUFB10O96000 172 aa14.88□□□□□ -0.03
SHF-211ENST00000561278 SLC4A3P48751 1232 aa14.88□□□□□ -0.03
SHF-211ENST00000561278 PDE1AP54750 535 aa14.88□□□□□ -0.03
SHF-211ENST00000561278 KLRC3Q07444 240 aa14.88□□□□□ -0.03
SHF-211ENST00000561278 FAM47AQ5JRC9 791 aa14.88□□□□□ -0.03
SHF-211ENST00000561278 OLFML2BQ68BL8 750 aa14.88□□□□□ -0.03
SHF-211ENST00000561278 LRRC47Q8N1G4 583 aaKnown RBP14.88□□□□□ -0.03
SHF-211ENST00000561278 EVI5LQ96CN4 794 aa14.88□□□□□ -0.03
SHF-211ENST00000561278 CEP95Q96GE4 821 aa14.88□□□□□ -0.03
SHF-211ENST00000561278 FRMPD3Q5JV73 1810 aa14.87□□□□□ -0.03
SHF-211ENST00000561278 TTLL1O95922 423 aa14.87□□□□□ -0.03
SHF-211ENST00000561278 MYCNP04198 464 aaPredicted RBP14.87□□□□□ -0.03
SHF-211ENST00000561278 CYBAP13498 195 aa14.87□□□□□ -0.03
SHF-211ENST00000561278 SYN1P17600 705 aa14.87□□□□□ -0.03
SHF-211ENST00000561278 STAT3P40763 770 aa14.87□□□□□ -0.03
SHF-211ENST00000561278 KCTD2Q14681 263 aa14.87□□□□□ -0.03
SHF-211ENST00000561278 ANO1Q5XXA6 986 aa14.87□□□□□ -0.03
SHF-211ENST00000561278 SNRNP48Q6IEG0 339 aaKnown RBP14.87□□□□□ -0.03
SHF-211ENST00000561278 B4GALNT3Q6L9W6 998 aa14.87□□□□□ -0.03
SHF-211ENST00000561278 RIOX2Q8IUF8 465 aa14.87□□□□□ -0.03
SHF-211ENST00000561278 ABRAQ8N0Z2 381 aa14.87□□□□□ -0.03
SHF-211ENST00000561278 LNPKQ9C0E8 428 aa14.87□□□□□ -0.03
SHF-211ENST00000561278 MTMR4Q9NYA4 1195 aa14.87□□□□□ -0.03
SHF-211ENST00000561278 ALPK3Q96L96 1907 aa14.87□□□□□ -0.03
SHF-211ENST00000561278 COL11A1P12107 1806 aaPredicted RBP14.87□□□□□ -0.03
SHF-211ENST00000561278 IGKV6D-41A0A0C4DH26 115 aa14.86□□□□□ -0.03
SHF-211ENST00000561278 TSPY2A6NKD2 308 aa14.86□□□□□ -0.03
SHF-211ENST00000561278 TRIM6-TRIM34B2RNG4 842 aa14.86□□□□□ -0.03
SHF-211ENST00000561278 PGK2P07205 417 aa14.86□□□□□ -0.03
SHF-211ENST00000561278 COPB2P35606 906 aa14.86□□□□□ -0.03
SHF-211ENST00000561278 TFAP4Q01664 338 aa14.86□□□□□ -0.03
SHF-211ENST00000561278 CTDSPL2Q05D32 466 aa14.86□□□□□ -0.03
SHF-211ENST00000561278 TRPV1Q8NER1 839 aa14.86□□□□□ -0.03
SHF-211ENST00000561278 KIFC2Q96AC6 838 aa14.86□□□□□ -0.03
SHF-211ENST00000561278 CHMP4CQ96CF2 233 aa14.86□□□□□ -0.03
SHF-211ENST00000561278 MAML3Q96JK9 1138 aa14.86□□□□□ -0.03
SHF-211ENST00000561278 RWDD1Q9H446 243 aaPredicted RBP14.86□□□□□ -0.03
SHF-211ENST00000561278 STAP2Q9UGK3 403 aa14.86□□□□□ -0.03
SHF-211ENST00000561278 ZNF214Q9UL59 606 aaPredicted RBP14.86□□□□□ -0.03
SHF-211ENST00000561278 ADAMTS5Q9UNA0 930 aa14.86□□□□□ -0.03
SHF-211ENST00000561278 PLIN4Q96Q06 1357 aa14.85□□□□□ -0.03
SHF-211ENST00000561278 COL6A1P12109 1028 aa14.85□□□□□ -0.03
SHF-211ENST00000561278 IKQ13123 557 aaPredicted RBP14.85□□□□□ -0.03
SHF-211ENST00000561278 AAMPQ13685 434 aa14.85□□□□□ -0.03
SHF-211ENST00000561278 CPXCR1Q8N123 301 aa14.85□□□□□ -0.03
SHF-211ENST00000561278 PRPF38AQ8NAV1 312 aaKnown RBP14.85□□□□□ -0.03
SHF-211ENST00000561278 RILPL2Q969X0 211 aa14.85□□□□□ -0.03
SHF-211ENST00000561278 TEX13BQ9BXU2 312 aa14.85□□□□□ -0.03
SHF-211ENST00000561278 SENP6Q9GZR1 1112 aaPredicted RBP14.85□□□□□ -0.03
SHF-211ENST00000561278 TOMM22Q9NS69 142 aa14.85□□□□□ -0.03
SHF-211ENST00000561278 MYH4Q9Y623 1939 aa14.84□□□□□ -0.03
SHF-211ENST00000561278 KBTBD13C9JR72 458 aa14.84□□□□□ -0.03
SHF-211ENST00000561278 ZBED4O75132 1171 aa14.84□□□□□ -0.03
SHF-211ENST00000561278 LRRC26Q2I0M4 334 aa14.84□□□□□ -0.03
SHF-211ENST00000561278 PRAMEF19Q5SWL8 479 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms