RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 COL6A3P12111 3177 aa20.88■□□□□ 0.93
CRTC3-208ENST00000560098 GJC2Q5T442 439 aaPredicted RBP20.87■□□□□ 0.93
CRTC3-208ENST00000560098 MAML3Q96JK9 1138 aa20.87■□□□□ 0.93
CRTC3-208ENST00000560098 STRBPQ96SI9 672 aaKnown RBP20.87■□□□□ 0.93
CRTC3-208ENST00000560098 FBXO28Q9NVF7 368 aa20.87■□□□□ 0.93
CRTC3-208ENST00000560098 PRAMEF19Q5SWL8 479 aa20.87■□□□□ 0.93
CRTC3-208ENST00000560098 ANO1Q5XXA6 986 aa20.87■□□□□ 0.93
CRTC3-208ENST00000560098 DEFB123Q8N688 67 aa20.87■□□□□ 0.93
CRTC3-208ENST00000560098 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.87■□□□□ 0.93
CRTC3-208ENST00000560098 MYH7P12883 1935 aa20.86■□□□□ 0.93
CRTC3-208ENST00000560098 KBTBD13C9JR72 458 aa20.86■□□□□ 0.93
CRTC3-208ENST00000560098 SBK1Q52WX2 424 aa20.86■□□□□ 0.93
CRTC3-208ENST00000560098 GIMAP6Q6P9H5 292 aa20.86■□□□□ 0.93
CRTC3-208ENST00000560098 RIOX2Q8IUF8 465 aa20.86■□□□□ 0.93
CRTC3-208ENST00000560098 KBTBD3Q8NAB2 608 aa20.86■□□□□ 0.93
CRTC3-208ENST00000560098 GPATCH3Q96I76 525 aa20.86■□□□□ 0.93
CRTC3-208ENST00000560098 LBHD1Q9BQE6 289 aaPredicted RBP20.86■□□□□ 0.93
CRTC3-208ENST00000560098 PPP1R9AQ9ULJ8 1098 aa20.86■□□□□ 0.93
CRTC3-208ENST00000560098 GSG1L2A8MUP6 293 aa20.85■□□□□ 0.93
CRTC3-208ENST00000560098 VWA5AO00534 786 aa20.85■□□□□ 0.93
CRTC3-208ENST00000560098 RAD21O60216 631 aa20.85■□□□□ 0.93
CRTC3-208ENST00000560098 RTP1P59025 263 aa20.85■□□□□ 0.93
CRTC3-208ENST00000560098 FAM83BQ5T0W9 1011 aa20.85■□□□□ 0.93
CRTC3-208ENST00000560098 MMP19Q99542 508 aa20.85■□□□□ 0.93
CRTC3-208ENST00000560098 DCTPP1Q9H773 170 aa20.85■□□□□ 0.93
CRTC3-208ENST00000560098 PRKAG2Q9UGJ0 569 aa20.85■□□□□ 0.93
CRTC3-208ENST00000560098 PARP14Q460N5 1801 aa20.84■□□□□ 0.93
CRTC3-208ENST00000560098 STAT3P40763 770 aa20.84■□□□□ 0.93
CRTC3-208ENST00000560098 KCTD2Q14681 263 aa20.84■□□□□ 0.93
CRTC3-208ENST00000560098 SLC39A5Q6ZMH5 540 aa20.84■□□□□ 0.93
CRTC3-208ENST00000560098 Q7L0L9 218 aa20.84■□□□□ 0.93
CRTC3-208ENST00000560098 SLC17A8Q8NDX2 589 aa20.84■□□□□ 0.93
CRTC3-208ENST00000560098 APPBP2Q92624 585 aa20.84■□□□□ 0.93
CRTC3-208ENST00000560098 OSBP2Q969R2 916 aa20.84■□□□□ 0.93
CRTC3-208ENST00000560098 MKNK2Q9HBH9 465 aa20.84■□□□□ 0.93
CRTC3-208ENST00000560098 ZNF214Q9UL59 606 aaPredicted RBP20.84■□□□□ 0.93
CRTC3-208ENST00000560098 MYCNP04198 464 aaPredicted RBP20.83■□□□□ 0.93
CRTC3-208ENST00000560098 RASA1P20936 1047 aa20.83■□□□□ 0.93
CRTC3-208ENST00000560098 STK11IPQ8N1F8 1099 aa20.83■□□□□ 0.93
CRTC3-208ENST00000560098 REPS2Q8NFH8 660 aa20.83■□□□□ 0.93
CRTC3-208ENST00000560098 NRBP1Q9UHY1 535 aa20.83■□□□□ 0.93
CRTC3-208ENST00000560098 ATP11BQ9Y2G3 1177 aa20.83■□□□□ 0.93
CRTC3-208ENST00000560098 MINDY4BA8MYZ0 360 aa20.82■□□□□ 0.92
CRTC3-208ENST00000560098 RNF113AO15541 343 aaKnown RBP20.82■□□□□ 0.92
CRTC3-208ENST00000560098 PGK2P07205 417 aa20.82■□□□□ 0.92
CRTC3-208ENST00000560098 COPB2P35606 906 aa20.82■□□□□ 0.92
CRTC3-208ENST00000560098 TSHZ3Q63HK5 1081 aa20.82■□□□□ 0.92
CRTC3-208ENST00000560098 NYAP2Q9P242 653 aa20.82■□□□□ 0.92
CRTC3-208ENST00000560098 DIS3Q9Y2L1 958 aaKnown RBP20.82■□□□□ 0.92
CRTC3-208ENST00000560098 ROBO3Q96MS0 1386 aa20.82■□□□□ 0.92
CRTC3-208ENST00000560098 ZFYP08048 801 aaPredicted RBP20.81■□□□□ 0.92
CRTC3-208ENST00000560098 LRRC41Q15345 812 aa20.81■□□□□ 0.92
CRTC3-208ENST00000560098 ZNF792Q3KQV3 632 aa20.81■□□□□ 0.92
CRTC3-208ENST00000560098 FAM47AQ5JRC9 791 aa20.81■□□□□ 0.92
CRTC3-208ENST00000560098 NUP88Q99567 741 aaPredicted RBP20.81■□□□□ 0.92
CRTC3-208ENST00000560098 SLF1Q9BQI6 1058 aa20.81■□□□□ 0.92
CRTC3-208ENST00000560098 TINF2Q9BSI4 451 aa20.81■□□□□ 0.92
CRTC3-208ENST00000560098 F5H6K3 240 aa20.8■□□□□ 0.92
CRTC3-208ENST00000560098 GPAA1O43292 621 aa20.8■□□□□ 0.92
CRTC3-208ENST00000560098 GNAT2P19087 354 aa20.8■□□□□ 0.92
CRTC3-208ENST00000560098 ADCYAP1R1P41586 468 aa20.8■□□□□ 0.92
CRTC3-208ENST00000560098 KLRC3Q07444 240 aa20.8■□□□□ 0.92
CRTC3-208ENST00000560098 SNX17Q15036 470 aa20.8■□□□□ 0.92
CRTC3-208ENST00000560098 MTMR10Q9NXD2 777 aa20.8■□□□□ 0.92
CRTC3-208ENST00000560098 COL11A1P12107 1806 aaPredicted RBP20.8■□□□□ 0.92
CRTC3-208ENST00000560098 GREB1LQ9C091 1923 aaPredicted RBP20.8■□□□□ 0.92
CRTC3-208ENST00000560098 NDUFB10O96000 172 aa20.79■□□□□ 0.92
CRTC3-208ENST00000560098 RARBP10826 455 aa20.79■□□□□ 0.92
CRTC3-208ENST00000560098 TDO2P48775 406 aa20.79■□□□□ 0.92
CRTC3-208ENST00000560098 FERMT2Q96AC1 680 aa20.79■□□□□ 0.92
CRTC3-208ENST00000560098 TEX13BQ9BXU2 312 aa20.79■□□□□ 0.92
CRTC3-208ENST00000560098 EPB41L4AQ9HCS5 686 aaPredicted RBP20.79■□□□□ 0.92
CRTC3-208ENST00000560098 XPNPEP3Q9NQH7 507 aa20.79■□□□□ 0.92
CRTC3-208ENST00000560098 LAMA2P24043 3122 aaKnown RBP20.79■□□□□ 0.92
CRTC3-208ENST00000560098 APPP05067 770 aa20.78■□□□□ 0.92
CRTC3-208ENST00000560098 TRIM60Q495X7 471 aa20.78■□□□□ 0.92
CRTC3-208ENST00000560098 C1orf53Q5VUE5 145 aa20.78■□□□□ 0.92
CRTC3-208ENST00000560098 ZNF444Q8N0Y2 327 aaPredicted RBP20.78■□□□□ 0.92
CRTC3-208ENST00000560098 PRPF38AQ8NAV1 312 aaKnown RBP20.78■□□□□ 0.92
CRTC3-208ENST00000560098 ZNF287Q9HBT7 754 aa20.78■□□□□ 0.92
CRTC3-208ENST00000560098 PRDM5Q9NQX1 630 aaPredicted RBP20.78■□□□□ 0.92
CRTC3-208ENST00000560098 CLIP2Q9UDT6 1046 aa20.78■□□□□ 0.92
CRTC3-208ENST00000560098 STXBP5LQ9Y2K9 1186 aa20.78■□□□□ 0.92
CRTC3-208ENST00000560098 IGKV6D-41A0A0C4DH26 115 aa20.78■□□□□ 0.92
CRTC3-208ENST00000560098 M0R2C6 588 aa20.78■□□□□ 0.92
CRTC3-208ENST00000560098 LRRFIP1Q32MZ4 808 aaKnown RBP20.78■□□□□ 0.92
CRTC3-208ENST00000560098 SNRNP48Q6IEG0 339 aaKnown RBP20.78■□□□□ 0.92
CRTC3-208ENST00000560098 PATL2C9JE40 543 aaKnown RBP20.77■□□□□ 0.91
CRTC3-208ENST00000560098 TAL1P17542 331 aaPredicted RBP20.77■□□□□ 0.91
CRTC3-208ENST00000560098 RNF180Q86T96 592 aa20.77■□□□□ 0.91
CRTC3-208ENST00000560098 PHF24Q9UPV7 400 aa20.77■□□□□ 0.91
CRTC3-208ENST00000560098 ZNFX1Q9P2E3 1918 aaKnown RBP20.76■□□□□ 0.91
CRTC3-208ENST00000560098 TTC41PQ6P2S7 1318 aa20.76■□□□□ 0.91
CRTC3-208ENST00000560098 PRDM1O75626 825 aa20.76■□□□□ 0.91
CRTC3-208ENST00000560098 ZNF865P0CJ78 1059 aaPredicted RBP20.76■□□□□ 0.91
CRTC3-208ENST00000560098 AKR1A1P14550 325 aa20.76■□□□□ 0.91
CRTC3-208ENST00000560098 IFNL3Q8IZI9 196 aa20.76■□□□□ 0.91
CRTC3-208ENST00000560098 MSL3Q8N5Y2 521 aaKnown RBP20.76■□□□□ 0.91
CRTC3-208ENST00000560098 MKL1Q969V6 931 aa20.76■□□□□ 0.91
CRTC3-208ENST00000560098 CEP95Q96GE4 821 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms