RNA–Protein interactions for RNA: ENST00000559406.5

TNFAIP2-205, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 1,799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-205ENST00000559406 AS3MTQ9HBK9 375 aa19■□□□□ 0.63
TNFAIP2-205ENST00000559406 SYNPO2Q9UMS6 1093 aa19■□□□□ 0.63
TNFAIP2-205ENST00000559406 JAK2O60674 1132 aa18.99■□□□□ 0.63
TNFAIP2-205ENST00000559406 CALM1P0DP23 149 aa18.99■□□□□ 0.63
TNFAIP2-205ENST00000559406 CALM2P0DP24 149 aa18.99■□□□□ 0.63
TNFAIP2-205ENST00000559406 CALM3P0DP25 149 aa18.99■□□□□ 0.63
TNFAIP2-205ENST00000559406 HMGCS2P54868 508 aa18.99■□□□□ 0.63
TNFAIP2-205ENST00000559406 ZNF543Q08ER8 600 aa18.99■□□□□ 0.63
TNFAIP2-205ENST00000559406 BECN1Q14457 450 aa18.99■□□□□ 0.63
TNFAIP2-205ENST00000559406 SRBD1Q8N5C6 995 aaKnown RBP18.99■□□□□ 0.63
TNFAIP2-205ENST00000559406 IPO9Q96P70 1041 aaKnown RBP18.99■□□□□ 0.63
TNFAIP2-205ENST00000559406 UNCXA6NJT0 531 aa18.98■□□□□ 0.63
TNFAIP2-205ENST00000559406 PPIL2Q13356 520 aa18.98■□□□□ 0.63
TNFAIP2-205ENST00000559406 TMTC3Q6ZXV5 915 aa18.98■□□□□ 0.63
TNFAIP2-205ENST00000559406 CCDC82Q8N4S0 544 aa18.98■□□□□ 0.63
TNFAIP2-205ENST00000559406 NSUN7Q8NE18 718 aaKnown RBP18.98■□□□□ 0.63
TNFAIP2-205ENST00000559406 GMCL1Q96IK5 515 aa18.98■□□□□ 0.63
TNFAIP2-205ENST00000559406 GOPCQ9HD26 462 aa18.98■□□□□ 0.63
TNFAIP2-205ENST00000559406 GPCPD1Q9NPB8 672 aa18.98■□□□□ 0.63
TNFAIP2-205ENST00000559406 CYTH3O43739 400 aa18.98■□□□□ 0.63
TNFAIP2-205ENST00000559406 PARP1P09874 1014 aaKnown RBP18.98■□□□□ 0.63
TNFAIP2-205ENST00000559406 MKRN3Q13064 507 aaKnown RBP18.98■□□□□ 0.63
TNFAIP2-205ENST00000559406 FAM83BQ5T0W9 1011 aa18.98■□□□□ 0.63
TNFAIP2-205ENST00000559406 CTCFLQ8NI51 663 aaPredicted RBP18.98■□□□□ 0.63
TNFAIP2-205ENST00000559406 DCAF4Q8WV16 495 aa18.98■□□□□ 0.63
TNFAIP2-205ENST00000559406 WNK4Q96J92 1243 aa18.98■□□□□ 0.63
TNFAIP2-205ENST00000559406 SH2D4AQ9H788 454 aa18.98■□□□□ 0.63
TNFAIP2-205ENST00000559406 KCNH4Q9UQ05 1017 aa18.98■□□□□ 0.63
TNFAIP2-205ENST00000559406 TLL2Q9Y6L7 1015 aa18.98■□□□□ 0.63
TNFAIP2-205ENST00000559406 SLC1A4P43007 532 aa18.97■□□□□ 0.63
TNFAIP2-205ENST00000559406 MOGSQ13724 837 aa18.97■□□□□ 0.63
TNFAIP2-205ENST00000559406 CCDC96Q2M329 555 aa18.97■□□□□ 0.63
TNFAIP2-205ENST00000559406 SH3D19Q5HYK7 790 aa18.97■□□□□ 0.63
TNFAIP2-205ENST00000559406 PHKBQ93100 1093 aa18.97■□□□□ 0.63
TNFAIP2-205ENST00000559406 UBA5Q9GZZ9 404 aa18.97■□□□□ 0.63
TNFAIP2-205ENST00000559406 CNTNAP5Q8WYK1 1306 aa18.97■□□□□ 0.63
TNFAIP2-205ENST00000559406 KLRF2D3W0D1 207 aa18.96■□□□□ 0.63
TNFAIP2-205ENST00000559406 VCAM1P19320 739 aa18.96■□□□□ 0.63
TNFAIP2-205ENST00000559406 SLC16A2P36021 539 aa18.96■□□□□ 0.63
TNFAIP2-205ENST00000559406 C12orf42Q96LP6 360 aa18.96■□□□□ 0.63
TNFAIP2-205ENST00000559406 A0A0G2JLL6 359 aaPredicted RBP18.96■□□□□ 0.63
TNFAIP2-205ENST00000559406 TMEM88BA6NKF7 163 aa18.96■□□□□ 0.63
TNFAIP2-205ENST00000559406 BMP3P12645 472 aa18.96■□□□□ 0.63
TNFAIP2-205ENST00000559406 FDPSP14324 419 aaKnown RBP18.96■□□□□ 0.63
TNFAIP2-205ENST00000559406 ASPRV1Q53RT3 343 aa18.96■□□□□ 0.63
TNFAIP2-205ENST00000559406 PRRT2Q7Z6L0 340 aaPredicted RBP18.96■□□□□ 0.63
TNFAIP2-205ENST00000559406 RASAL3Q86YV0 1011 aa18.96■□□□□ 0.63
TNFAIP2-205ENST00000559406 SMARCC2Q8TAQ2 1214 aa18.96■□□□□ 0.63
TNFAIP2-205ENST00000559406 FBXO28Q9NVF7 368 aa18.96■□□□□ 0.63
TNFAIP2-205ENST00000559406 RBM28Q9NW13 759 aaKnown RBP18.96■□□□□ 0.63
TNFAIP2-205ENST00000559406 SMCHD1A6NHR9 2005 aa18.95■□□□□ 0.62
TNFAIP2-205ENST00000559406 hCG_1642624A0A1W2PR95 340 aa18.95■□□□□ 0.62
TNFAIP2-205ENST00000559406 PTPDC1A2A3K4 754 aa18.95■□□□□ 0.62
TNFAIP2-205ENST00000559406 C19orf81C9J6K1 198 aa18.95■□□□□ 0.62
TNFAIP2-205ENST00000559406 IFNAR1P17181 557 aa18.95■□□□□ 0.62
TNFAIP2-205ENST00000559406 KIF5BP33176 963 aa18.95■□□□□ 0.62
TNFAIP2-205ENST00000559406 SPRYD7Q5W111 196 aa18.95■□□□□ 0.62
TNFAIP2-205ENST00000559406 TMEM232C9JQI7 657 aa18.94■□□□□ 0.62
TNFAIP2-205ENST00000559406 CXCL11O14625 94 aa18.94■□□□□ 0.62
TNFAIP2-205ENST00000559406 USP14P54578 494 aa18.94■□□□□ 0.62
TNFAIP2-205ENST00000559406 TREML2Q5T2D2 321 aa18.94■□□□□ 0.62
TNFAIP2-205ENST00000559406 LPAR1Q92633 364 aa18.94■□□□□ 0.62
TNFAIP2-205ENST00000559406 DDX11Q96FC9 970 aa18.94■□□□□ 0.62
TNFAIP2-205ENST00000559406 INTS4Q96HW7 963 aaKnown RBP18.94■□□□□ 0.62
TNFAIP2-205ENST00000559406 MS4A4AQ96JQ5 239 aa18.94■□□□□ 0.62
TNFAIP2-205ENST00000559406 COL11A1P12107 1806 aaPredicted RBP18.94■□□□□ 0.62
TNFAIP2-205ENST00000559406 CPLX1O14810 134 aa18.93■□□□□ 0.62
TNFAIP2-205ENST00000559406 WDR46O15213 610 aaKnown RBP18.93■□□□□ 0.62
TNFAIP2-205ENST00000559406 PPP2R5BQ15173 497 aa18.93■□□□□ 0.62
TNFAIP2-205ENST00000559406 GPATCH4Q5T3I0 446 aaKnown RBP18.93■□□□□ 0.62
TNFAIP2-205ENST00000559406 RPAP3Q9H6T3 665 aaPredicted RBP18.93■□□□□ 0.62
TNFAIP2-205ENST00000559406 ISY1Q9ULR0 285 aaKnown RBP18.93■□□□□ 0.62
TNFAIP2-205ENST00000559406 CCDC196A0A1B0GTZ2 297 aa18.93■□□□□ 0.62
TNFAIP2-205ENST00000559406 ZNF157P51786 506 aaPredicted RBP18.93■□□□□ 0.62
TNFAIP2-205ENST00000559406 RGMBQ6NW40 437 aa18.93■□□□□ 0.62
TNFAIP2-205ENST00000559406 PIBF1Q8WXW3 757 aa18.93■□□□□ 0.62
TNFAIP2-205ENST00000559406 LLPHQ9BRT6 129 aaKnown RBP18.93■□□□□ 0.62
TNFAIP2-205ENST00000559406 RIOX1Q9H6W3 641 aa18.93■□□□□ 0.62
TNFAIP2-205ENST00000559406 ABT1Q9ULW3 272 aaKnown RBP18.93■□□□□ 0.62
TNFAIP2-205ENST00000559406 FAM155AB1AL88 458 aaPredicted RBP18.92■□□□□ 0.62
TNFAIP2-205ENST00000559406 GJB2P29033 226 aa18.92■□□□□ 0.62
TNFAIP2-205ENST00000559406 SNAP25P60880 206 aa18.92■□□□□ 0.62
TNFAIP2-205ENST00000559406 GPAT2Q6NUI2 795 aa18.92■□□□□ 0.62
TNFAIP2-205ENST00000559406 BTNL9Q6UXG8 535 aa18.92■□□□□ 0.62
TNFAIP2-205ENST00000559406 GADL1Q6ZQY3 521 aa18.92■□□□□ 0.62
TNFAIP2-205ENST00000559406 ADGRF4Q8IZF3 695 aa18.92■□□□□ 0.62
TNFAIP2-205ENST00000559406 AIFM3Q96NN9 605 aa18.92■□□□□ 0.62
TNFAIP2-205ENST00000559406 SPZ1Q9BXG8 430 aa18.92■□□□□ 0.62
TNFAIP2-205ENST00000559406 SLC26A6Q9BXS9 759 aa18.92■□□□□ 0.62
TNFAIP2-205ENST00000559406 VAT1LQ9HCJ6 419 aa18.92■□□□□ 0.62
TNFAIP2-205ENST00000559406 DHX16O60231 1041 aaKnown RBP18.91■□□□□ 0.62
TNFAIP2-205ENST00000559406 FMNL1O95466 1100 aaPredicted RBP18.91■□□□□ 0.62
TNFAIP2-205ENST00000559406 GNAQP50148 359 aa18.91■□□□□ 0.62
TNFAIP2-205ENST00000559406 PKN1Q16512 942 aa18.91■□□□□ 0.62
TNFAIP2-205ENST00000559406 SHISA4Q96DD7 197 aa18.91■□□□□ 0.62
TNFAIP2-205ENST00000559406 JMJD4Q9H9V9 463 aa18.91■□□□□ 0.62
TNFAIP2-205ENST00000559406 TMOD4Q9NZQ9 345 aa18.91■□□□□ 0.62
TNFAIP2-205ENST00000559406 SLC10A3P09131 477 aa18.91■□□□□ 0.62
TNFAIP2-205ENST00000559406 ZBTB48P10074 688 aaPredicted RBP18.91■□□□□ 0.62
TNFAIP2-205ENST00000559406 APLP1P51693 650 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms