RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 INTS3Q68E01 1043 aaKnown RBP6.53□□□□□ -1.36
CASC4-206ENST00000558847 OVOS1Q6IE37 1185 aa6.53□□□□□ -1.36
CASC4-206ENST00000558847 SPACA3Q8IXA5 215 aa6.53□□□□□ -1.36
CASC4-206ENST00000558847 ASB11Q8WXH4 323 aa6.53□□□□□ -1.36
CASC4-206ENST00000558847 CCDC113Q9H0I3 377 aa6.53□□□□□ -1.36
CASC4-206ENST00000558847 SNX11Q9Y5W9 270 aa6.53□□□□□ -1.36
CASC4-206ENST00000558847 LRRC10BA6NIK2 292 aa6.52□□□□□ -1.37
CASC4-206ENST00000558847 GNAT3A8MTJ3 354 aa6.52□□□□□ -1.37
CASC4-206ENST00000558847 PRR33A8MZF0 331 aa6.52□□□□□ -1.37
CASC4-206ENST00000558847 CHURC1-FNTBB4DL54 471 aa6.52□□□□□ -1.37
CASC4-206ENST00000558847 ZP2Q05996 745 aa6.52□□□□□ -1.37
CASC4-206ENST00000558847 KCNMB1Q16558 191 aa6.52□□□□□ -1.37
CASC4-206ENST00000558847 DDR2Q16832 855 aa6.52□□□□□ -1.37
CASC4-206ENST00000558847 DEPDC7Q96QD5 511 aa6.52□□□□□ -1.37
CASC4-206ENST00000558847 SLC22A31A6NKX4 558 aa6.51□□□□□ -1.37
CASC4-206ENST00000558847 CCNFP41002 786 aa6.51□□□□□ -1.37
CASC4-206ENST00000558847 IFRD2Q12894 506 aaPredicted RBP6.51□□□□□ -1.37
CASC4-206ENST00000558847 PPP2R5EQ16537 467 aa6.51□□□□□ -1.37
CASC4-206ENST00000558847 NKPD1Q17RQ9 610 aa6.51□□□□□ -1.37
CASC4-206ENST00000558847 CDCP2Q5VXM1 449 aa6.51□□□□□ -1.37
CASC4-206ENST00000558847 NLRC3Q7RTR2 1065 aa6.51□□□□□ -1.37
CASC4-206ENST00000558847 ZSWIM9Q86XI8 627 aa6.51□□□□□ -1.37
CASC4-206ENST00000558847 FAM169BQ8N8A8 192 aa6.51□□□□□ -1.37
CASC4-206ENST00000558847 PIF1Q9H611 641 aa6.51□□□□□ -1.37
CASC4-206ENST00000558847 ANTXR1Q9H6X2 564 aa6.51□□□□□ -1.37
CASC4-206ENST00000558847 PHAXQ9H814 394 aaKnown RBP6.51□□□□□ -1.37
CASC4-206ENST00000558847 TPX2Q9ULW0 747 aaKnown RBP6.51□□□□□ -1.37
CASC4-206ENST00000558847 MSRB2Q9Y3D2 182 aa6.51□□□□□ -1.37
CASC4-206ENST00000558847 CAPN6Q9Y6Q1 641 aa6.51□□□□□ -1.37
CASC4-206ENST00000558847 RASGRF1Q13972 1273 aa6.5□□□□□ -1.37
CASC4-206ENST00000558847 NCAPHQ15003 741 aa6.5□□□□□ -1.37
CASC4-206ENST00000558847 MLANAQ16655 118 aa6.5□□□□□ -1.37
CASC4-206ENST00000558847 SFRP5Q5T4F7 317 aa6.5□□□□□ -1.37
CASC4-206ENST00000558847 LARP1BQ659C4 914 aaKnown RBP6.5□□□□□ -1.37
CASC4-206ENST00000558847 SDE2Q6IQ49 451 aa6.5□□□□□ -1.37
CASC4-206ENST00000558847 TTC6Q86TZ1 520 aa6.5□□□□□ -1.37
CASC4-206ENST00000558847 CDH24Q86UP0 819 aa6.5□□□□□ -1.37
CASC4-206ENST00000558847 MFSD4AQ8N468 514 aa6.5□□□□□ -1.37
CASC4-206ENST00000558847 KRTAP4-7Q9BYR0 210 aa6.5□□□□□ -1.37
CASC4-206ENST00000558847 CNNM2Q9H8M5 875 aa6.5□□□□□ -1.37
CASC4-206ENST00000558847 SNTG2Q9NY99 539 aa6.5□□□□□ -1.37
CASC4-206ENST00000558847 CEP131Q9UPN4 1083 aa6.5□□□□□ -1.37
CASC4-206ENST00000558847 TBX22Q9Y458 520 aa6.5□□□□□ -1.37
CASC4-206ENST00000558847 TNFRSF10CO14798 259 aa6.49□□□□□ -1.37
CASC4-206ENST00000558847 UBOX5O94941 541 aa6.49□□□□□ -1.37
CASC4-206ENST00000558847 NME1P15531 152 aaKnown RBP6.49□□□□□ -1.37
CASC4-206ENST00000558847 RAG1P15918 1043 aa6.49□□□□□ -1.37
CASC4-206ENST00000558847 ETV3P41162 512 aa6.49□□□□□ -1.37
CASC4-206ENST00000558847 RASA3Q14644 834 aa6.49□□□□□ -1.37
CASC4-206ENST00000558847 BBS9Q3SYG4 887 aa6.49□□□□□ -1.37
CASC4-206ENST00000558847 ARSHQ5FYA8 562 aa6.49□□□□□ -1.37
CASC4-206ENST00000558847 FLAD1Q8NFF5 587 aa6.49□□□□□ -1.37
CASC4-206ENST00000558847 BAHD1Q8TBE0 780 aaPredicted RBP6.49□□□□□ -1.37
CASC4-206ENST00000558847 ZNF669Q96BR6 464 aaPredicted RBP6.49□□□□□ -1.37
CASC4-206ENST00000558847 COX4I2Q96KJ9 171 aa6.49□□□□□ -1.37
CASC4-206ENST00000558847 FAM84AQ96KN4 292 aa6.49□□□□□ -1.37
CASC4-206ENST00000558847 DHRS1Q96LJ7 313 aa6.49□□□□□ -1.37
CASC4-206ENST00000558847 PUS7Q96PZ0 661 aaKnown RBP6.49□□□□□ -1.37
CASC4-206ENST00000558847 FAM53CQ9NYF3 392 aa6.49□□□□□ -1.37
CASC4-206ENST00000558847 A0A1W2PQH9 124 aa6.48□□□□□ -1.37
CASC4-206ENST00000558847 PDPK1O15530 556 aa6.48□□□□□ -1.37
CASC4-206ENST00000558847 NAT2P11245 290 aa6.48□□□□□ -1.37
CASC4-206ENST00000558847 POLR2BP30876 1174 aaKnown RBP6.48□□□□□ -1.37
CASC4-206ENST00000558847 CLCN7P51798 805 aa6.48□□□□□ -1.37
CASC4-206ENST00000558847 ATG4CQ96DT6 458 aa6.48□□□□□ -1.37
CASC4-206ENST00000558847 CCDC74BQ96LY2 380 aa6.48□□□□□ -1.37
CASC4-206ENST00000558847 Q96M66 194 aa6.48□□□□□ -1.37
CASC4-206ENST00000558847 KIF2CQ99661 725 aa6.48□□□□□ -1.37
CASC4-206ENST00000558847 TMX1Q9H3N1 280 aa6.48□□□□□ -1.37
CASC4-206ENST00000558847 PITPNM2Q9BZ72 1349 aa6.48□□□□□ -1.37
CASC4-206ENST00000558847 FAM155AB1AL88 458 aaPredicted RBP6.47□□□□□ -1.37
CASC4-206ENST00000558847 RGS13O14921 159 aa6.47□□□□□ -1.37
CASC4-206ENST00000558847 DDAH1O94760 285 aa6.47□□□□□ -1.37
CASC4-206ENST00000558847 HSD3B2P26439 372 aa6.47□□□□□ -1.37
CASC4-206ENST00000558847 KIR3DL1P43629 444 aa6.47□□□□□ -1.37
CASC4-206ENST00000558847 AFMP43652 599 aa6.47□□□□□ -1.37
CASC4-206ENST00000558847 TAF7LQ5H9L4 462 aa6.47□□□□□ -1.37
CASC4-206ENST00000558847 MPZL3Q6UWV2 235 aa6.47□□□□□ -1.37
CASC4-206ENST00000558847 PHACTR4Q8IZ21 702 aa6.47□□□□□ -1.37
CASC4-206ENST00000558847 ST13P5Q8NFI4 369 aaPredicted RBP6.47□□□□□ -1.37
CASC4-206ENST00000558847 RNF141Q8WVD5 230 aa6.47□□□□□ -1.37
CASC4-206ENST00000558847 EPN3Q9H201 632 aa6.47□□□□□ -1.37
CASC4-206ENST00000558847 ST14Q9Y5Y6 855 aa6.47□□□□□ -1.37
CASC4-206ENST00000558847 CBX7O95931 251 aa6.46□□□□□ -1.38
CASC4-206ENST00000558847 HSP90B1P14625 803 aaKnown RBP6.46□□□□□ -1.38
CASC4-206ENST00000558847 CYP7A1P22680 504 aa6.46□□□□□ -1.38
CASC4-206ENST00000558847 CHMP4BP1P59074 171 aa6.46□□□□□ -1.38
CASC4-206ENST00000558847 TNK2Q07912 1038 aa6.46□□□□□ -1.38
CASC4-206ENST00000558847 EEPD1Q7L9B9 569 aa6.46□□□□□ -1.38
CASC4-206ENST00000558847 FAM178BQ8IXR5 827 aa6.46□□□□□ -1.38
CASC4-206ENST00000558847 CELF2-AS1Q8N7Q2 184 aa6.46□□□□□ -1.38
CASC4-206ENST00000558847 VWCEQ96DN2 955 aa6.46□□□□□ -1.38
CASC4-206ENST00000558847 LIN37Q96GY3 246 aaPredicted RBP6.46□□□□□ -1.38
CASC4-206ENST00000558847 KREMEN1Q96MU8 473 aa6.46□□□□□ -1.38
CASC4-206ENST00000558847 ASPNQ9BXN1 380 aa6.46□□□□□ -1.38
CASC4-206ENST00000558847 CARS2Q9HA77 564 aaKnown RBP6.46□□□□□ -1.38
CASC4-206ENST00000558847 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.46□□□□□ -1.38
CASC4-206ENST00000558847 CTNND2Q9UQB3 1225 aa6.46□□□□□ -1.38
CASC4-206ENST00000558847 ZNF503-AS2A6NEH8 195 aa6.45□□□□□ -1.38
CASC4-206ENST00000558847 CCDC85CA6NKD9 419 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms