RNA–Protein interactions for RNA: ENST00000555215.5

HNRNPC-218, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-218ENST00000555215 DNM1LO00429 736 aa12.13□□□□□ -0.47
HNRNPC-218ENST00000555215 WDR46O15213 610 aaKnown RBP12.13□□□□□ -0.47
HNRNPC-218ENST00000555215 RASA1P20936 1047 aa12.13□□□□□ -0.47
HNRNPC-218ENST00000555215 FAM47AQ5JRC9 791 aa12.13□□□□□ -0.47
HNRNPC-218ENST00000555215 FAM83BQ5T0W9 1011 aa12.13□□□□□ -0.47
HNRNPC-218ENST00000555215 SH3RF1Q7Z6J0 888 aa12.13□□□□□ -0.47
HNRNPC-218ENST00000555215 MB21D1Q8N884 522 aa12.13□□□□□ -0.47
HNRNPC-218ENST00000555215 SLC17A8Q8NDX2 589 aa12.13□□□□□ -0.47
HNRNPC-218ENST00000555215 FERMT2Q96AC1 680 aa12.13□□□□□ -0.47
HNRNPC-218ENST00000555215 LENG1Q96BZ8 264 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-218ENST00000555215 CCDC17Q96LX7 622 aa12.13□□□□□ -0.47
HNRNPC-218ENST00000555215 LRRCC1Q9C099 1032 aa12.13□□□□□ -0.47
HNRNPC-218ENST00000555215 MROH8Q9H579 483 aa12.13□□□□□ -0.47
HNRNPC-218ENST00000555215 ARHGEF10LQ9HCE6 1279 aa12.13□□□□□ -0.47
HNRNPC-218ENST00000555215 EPB41L4AQ9HCS5 686 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-218ENST00000555215 ZNF214Q9UL59 606 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-218ENST00000555215 COL11A1P12107 1806 aaPredicted RBP12.12□□□□□ -0.47
HNRNPC-218ENST00000555215 ZNF236Q9UL36 1845 aa12.12□□□□□ -0.47
HNRNPC-218ENST00000555215 VWA5AO00534 786 aa12.12□□□□□ -0.47
HNRNPC-218ENST00000555215 SEPT4O43236 478 aa12.12□□□□□ -0.47
HNRNPC-218ENST00000555215 MYCNP04198 464 aaPredicted RBP12.12□□□□□ -0.47
HNRNPC-218ENST00000555215 ADCYAP1R1P41586 468 aa12.12□□□□□ -0.47
HNRNPC-218ENST00000555215 LRRC41Q15345 812 aa12.12□□□□□ -0.47
HNRNPC-218ENST00000555215 ZNF792Q3KQV3 632 aa12.12□□□□□ -0.47
HNRNPC-218ENST00000555215 SLC39A5Q6ZMH5 540 aa12.12□□□□□ -0.47
HNRNPC-218ENST00000555215 RIOX2Q8IUF8 465 aa12.12□□□□□ -0.47
HNRNPC-218ENST00000555215 OTUD7AQ8TE49 926 aaPredicted RBP12.12□□□□□ -0.47
HNRNPC-218ENST00000555215 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.12□□□□□ -0.47
HNRNPC-218ENST00000555215 KANSL2Q9H9L4 492 aa12.12□□□□□ -0.47
HNRNPC-218ENST00000555215 ATP11BQ9Y2G3 1177 aa12.12□□□□□ -0.47
HNRNPC-218ENST00000555215 RIPK3Q9Y572 518 aa12.12□□□□□ -0.47
HNRNPC-218ENST00000555215 MYH8P13535 1937 aa12.11□□□□□ -0.47
HNRNPC-218ENST00000555215 M0R2C6 588 aa12.11□□□□□ -0.47
HNRNPC-218ENST00000555215 RAD21O60216 631 aa12.11□□□□□ -0.47
HNRNPC-218ENST00000555215 MSCO60682 206 aa12.11□□□□□ -0.47
HNRNPC-218ENST00000555215 PRDM1O75626 825 aa12.11□□□□□ -0.47
HNRNPC-218ENST00000555215 FCER1AP12319 257 aa12.11□□□□□ -0.47
HNRNPC-218ENST00000555215 ITGB8P26012 769 aa12.11□□□□□ -0.47
HNRNPC-218ENST00000555215 STAT3P40763 770 aa12.11□□□□□ -0.47
HNRNPC-218ENST00000555215 IRX5P78411 483 aaPredicted RBP12.11□□□□□ -0.47
HNRNPC-218ENST00000555215 TRIM60Q495X7 471 aa12.11□□□□□ -0.47
HNRNPC-218ENST00000555215 C9orf50Q5SZB4 431 aa12.11□□□□□ -0.47
HNRNPC-218ENST00000555215 GPR153Q6NV75 609 aa12.11□□□□□ -0.47
HNRNPC-218ENST00000555215 ABRAQ8N0Z2 381 aa12.11□□□□□ -0.47
HNRNPC-218ENST00000555215 SEC62Q99442 399 aaKnown RBP12.11□□□□□ -0.47
HNRNPC-218ENST00000555215 DCTPP1Q9H773 170 aa12.11□□□□□ -0.47
HNRNPC-218ENST00000555215 ECHDC1Q9NTX5 307 aa12.11□□□□□ -0.47
HNRNPC-218ENST00000555215 PPP1R9AQ9ULJ8 1098 aa12.11□□□□□ -0.47
HNRNPC-218ENST00000555215 MYH7P12883 1935 aa12.1□□□□□ -0.47
HNRNPC-218ENST00000555215 GREB1LQ9C091 1923 aaPredicted RBP12.1□□□□□ -0.47
HNRNPC-218ENST00000555215 IGKV6D-41A0A0C4DH26 115 aa12.1□□□□□ -0.47
HNRNPC-218ENST00000555215 TRIM43BA6NCK2 446 aa12.1□□□□□ -0.47
HNRNPC-218ENST00000555215 MINDY4BA8MYZ0 360 aa12.1□□□□□ -0.47
HNRNPC-218ENST00000555215 POTEB2H3BUK9 544 aa12.1□□□□□ -0.47
HNRNPC-218ENST00000555215 DLL1O00548 723 aa12.1□□□□□ -0.47
HNRNPC-218ENST00000555215 PGK1P00558 417 aa12.1□□□□□ -0.47
HNRNPC-218ENST00000555215 ZNF865P0CJ78 1059 aaPredicted RBP12.1□□□□□ -0.47
HNRNPC-218ENST00000555215 SNX17Q15036 470 aa12.1□□□□□ -0.47
HNRNPC-218ENST00000555215 SHHQ15465 462 aa12.1□□□□□ -0.47
HNRNPC-218ENST00000555215 SBK1Q52WX2 424 aa12.1□□□□□ -0.47
HNRNPC-218ENST00000555215 KBTBD3Q8NAB2 608 aa12.1□□□□□ -0.47
HNRNPC-218ENST00000555215 ARRDC4Q8NCT1 418 aa12.1□□□□□ -0.47
HNRNPC-218ENST00000555215 TRIM43Q96BQ3 446 aaPredicted RBP12.1□□□□□ -0.47
HNRNPC-218ENST00000555215 FAM161BQ96MY7 647 aa12.1□□□□□ -0.47
HNRNPC-218ENST00000555215 GUCD1Q96NT3 240 aa12.1□□□□□ -0.47
HNRNPC-218ENST00000555215 MMP19Q99542 508 aa12.1□□□□□ -0.47
HNRNPC-218ENST00000555215 TINF2Q9BSI4 451 aa12.1□□□□□ -0.47
HNRNPC-218ENST00000555215 SH2D4AQ9H788 454 aa12.1□□□□□ -0.47
HNRNPC-218ENST00000555215 F5H6K3 240 aa12.09□□□□□ -0.47
HNRNPC-218ENST00000555215 RNF113AO15541 343 aaKnown RBP12.09□□□□□ -0.47
HNRNPC-218ENST00000555215 GPAA1O43292 621 aa12.09□□□□□ -0.47
HNRNPC-218ENST00000555215 SLC25A27O95847 323 aa12.09□□□□□ -0.47
HNRNPC-218ENST00000555215 NDUFB10O96000 172 aa12.09□□□□□ -0.47
HNRNPC-218ENST00000555215 EPHB4P54760 987 aa12.09□□□□□ -0.47
HNRNPC-218ENST00000555215 TLE2Q04725 743 aa12.09□□□□□ -0.47
HNRNPC-218ENST00000555215 KLRC3Q07444 240 aa12.09□□□□□ -0.47
HNRNPC-218ENST00000555215 BADQ92934 168 aa12.09□□□□□ -0.47
HNRNPC-218ENST00000555215 PDLIM7Q9NR12 457 aa12.09□□□□□ -0.47
HNRNPC-218ENST00000555215 PCDHB15Q9Y5E8 787 aa12.09□□□□□ -0.47
HNRNPC-218ENST00000555215 KBTBD13C9JR72 458 aa12.08□□□□□ -0.48
HNRNPC-218ENST00000555215 ADCY6O43306 1168 aa12.08□□□□□ -0.48
HNRNPC-218ENST00000555215 SNAI1O95863 264 aaPredicted RBP12.08□□□□□ -0.48
HNRNPC-218ENST00000555215 ZSCAN25Q6NSZ9 544 aa12.08□□□□□ -0.48
HNRNPC-218ENST00000555215 APPBP2Q92624 585 aa12.08□□□□□ -0.48
HNRNPC-218ENST00000555215 CHMP4CQ96CF2 233 aa12.08□□□□□ -0.48
HNRNPC-218ENST00000555215 FGD4Q96M96 766 aa12.08□□□□□ -0.48
HNRNPC-218ENST00000555215 LBHD1Q9BQE6 289 aaPredicted RBP12.08□□□□□ -0.48
HNRNPC-218ENST00000555215 SLF1Q9BQI6 1058 aa12.08□□□□□ -0.48
HNRNPC-218ENST00000555215 GOPCQ9HD26 462 aa12.08□□□□□ -0.48
HNRNPC-218ENST00000555215 INCENPQ9NQS7 918 aa12.08□□□□□ -0.48
HNRNPC-218ENST00000555215 PRDM5Q9NQX1 630 aaPredicted RBP12.08□□□□□ -0.48
HNRNPC-218ENST00000555215 NYAP2Q9P242 653 aa12.08□□□□□ -0.48
HNRNPC-218ENST00000555215 ARPP21Q9UBL0 812 aaPredicted RBP12.08□□□□□ -0.48
HNRNPC-218ENST00000555215 CLIP2Q9UDT6 1046 aa12.08□□□□□ -0.48
HNRNPC-218ENST00000555215 PHF24Q9UPV7 400 aa12.08□□□□□ -0.48
HNRNPC-218ENST00000555215 STXBP5LQ9Y2K9 1186 aa12.08□□□□□ -0.48
HNRNPC-218ENST00000555215 TACC3Q9Y6A5 838 aa12.08□□□□□ -0.48
HNRNPC-218ENST00000555215 LTBP2Q14767 1821 aa12.08□□□□□ -0.48
HNRNPC-218ENST00000555215 UNC80Q8N2C7 3258 aa12.08□□□□□ -0.48
HNRNPC-218ENST00000555215 ROBO3Q96MS0 1386 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms