RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 PAX4O43316 350 aa4.92□□□□□ -1.62
SCFD1-213ENST00000554776 LTKP29376 864 aa4.92□□□□□ -1.62
SCFD1-213ENST00000554776 DNAJA1P31689 397 aaKnown RBP4.92□□□□□ -1.62
SCFD1-213ENST00000554776 GDNFP39905 211 aa4.92□□□□□ -1.62
SCFD1-213ENST00000554776 PMS1P54277 932 aaKnown RBP4.92□□□□□ -1.62
SCFD1-213ENST00000554776 EGR3Q06889 387 aa4.92□□□□□ -1.62
SCFD1-213ENST00000554776 SNW1Q13573 536 aaKnown RBP4.92□□□□□ -1.62
SCFD1-213ENST00000554776 ZYXQ15942 572 aaKnown RBP4.92□□□□□ -1.62
SCFD1-213ENST00000554776 CLEC16AQ2KHT3 1053 aa4.92□□□□□ -1.62
SCFD1-213ENST00000554776 UNC5AQ6ZN44 842 aa4.92□□□□□ -1.62
SCFD1-213ENST00000554776 TMC3Q7Z5M5 1100 aa4.92□□□□□ -1.62
SCFD1-213ENST00000554776 VPS37DQ86XT2 251 aa4.92□□□□□ -1.62
SCFD1-213ENST00000554776 C19orf47Q8N9M1 422 aaKnown RBP4.92□□□□□ -1.62
SCFD1-213ENST00000554776 DAGLBQ8NCG7 672 aa4.92□□□□□ -1.62
SCFD1-213ENST00000554776 ASIC4Q96FT7 647 aa4.92□□□□□ -1.62
SCFD1-213ENST00000554776 CRBNQ96SW2 442 aa4.92□□□□□ -1.62
SCFD1-213ENST00000554776 PRDM14Q9GZV8 571 aa4.92□□□□□ -1.62
SCFD1-213ENST00000554776 MKRN2Q9H000 416 aaKnown RBP4.92□□□□□ -1.62
SCFD1-213ENST00000554776 SLAMF8Q9P0V8 285 aa4.92□□□□□ -1.62
SCFD1-213ENST00000554776 PPP1R1BQ9UD71 204 aaPredicted RBP4.92□□□□□ -1.62
SCFD1-213ENST00000554776 TMEM59LQ9UK28 342 aa4.92□□□□□ -1.62
SCFD1-213ENST00000554776 CARMIL2Q6F5E8 1435 aa4.91□□□□□ -1.62
SCFD1-213ENST00000554776 DNAJC25-GNG10A0A024R161 153 aa4.91□□□□□ -1.62
SCFD1-213ENST00000554776 C9IYK1 514 aa4.91□□□□□ -1.62
SCFD1-213ENST00000554776 SIGLEC6O43699 453 aa4.91□□□□□ -1.62
SCFD1-213ENST00000554776 PRAMEF1O95521 474 aa4.91□□□□□ -1.62
SCFD1-213ENST00000554776 TEKQ02763 1124 aa4.91□□□□□ -1.62
SCFD1-213ENST00000554776 AUHQ13825 339 aaKnown RBP4.91□□□□□ -1.62
SCFD1-213ENST00000554776 RALGPS1Q5JS13 557 aa4.91□□□□□ -1.62
SCFD1-213ENST00000554776 TTC6Q86TZ1 520 aa4.91□□□□□ -1.62
SCFD1-213ENST00000554776 PPFIBP1Q86W92 1011 aa4.91□□□□□ -1.62
SCFD1-213ENST00000554776 ZNF655Q8N720 491 aaPredicted RBP4.91□□□□□ -1.62
SCFD1-213ENST00000554776 CPLX3Q8WVH0 158 aa4.91□□□□□ -1.62
SCFD1-213ENST00000554776 SMARCC1Q92922 1105 aaPredicted RBP4.91□□□□□ -1.62
SCFD1-213ENST00000554776 TCTN2Q96GX1 697 aa4.91□□□□□ -1.62
SCFD1-213ENST00000554776 FMNL2Q96PY5 1086 aa4.91□□□□□ -1.62
SCFD1-213ENST00000554776 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.91□□□□□ -1.622e-9■□□□□ 9.9
SCFD1-213ENST00000554776 PRR13Q9NZ81 148 aa4.91□□□□□ -1.62
SCFD1-213ENST00000554776 PCDHB12Q9Y5F1 795 aa4.91□□□□□ -1.62
SCFD1-213ENST00000554776 SHOXO15266 292 aa4.9□□□□□ -1.63
SCFD1-213ENST00000554776 AFMP43652 599 aa4.9□□□□□ -1.63
SCFD1-213ENST00000554776 ANKRD39Q53RE8 183 aa4.9□□□□□ -1.63
SCFD1-213ENST00000554776 TDRD10Q5VZ19 366 aaKnown RBP4.9□□□□□ -1.63
SCFD1-213ENST00000554776 RNF111Q6ZNA4 994 aa4.9□□□□□ -1.63
SCFD1-213ENST00000554776 C7orf61Q8IZ16 206 aa4.9□□□□□ -1.63
SCFD1-213ENST00000554776 USHBP1Q8N6Y0 703 aa4.9□□□□□ -1.63
SCFD1-213ENST00000554776 ANAPC16Q96DE5 110 aa4.9□□□□□ -1.63
SCFD1-213ENST00000554776 ADAMTS10Q9H324 1103 aa4.9□□□□□ -1.63
SCFD1-213ENST00000554776 ZNF214Q9UL59 606 aaPredicted RBP4.9□□□□□ -1.63
SCFD1-213ENST00000554776 ZNF281Q9Y2X9 895 aa4.9□□□□□ -1.63
SCFD1-213ENST00000554776 SLC12A7Q9Y666 1083 aa4.9□□□□□ -1.63
SCFD1-213ENST00000554776 MRVI1Q9Y6F6 885 aa4.9□□□□□ -1.63
SCFD1-213ENST00000554776 LTBP3Q9NS15 1303 aa4.9□□□□□ -1.63
SCFD1-213ENST00000554776 A0A1W2PQH9 124 aa4.89□□□□□ -1.63
SCFD1-213ENST00000554776 SSBP05455 408 aaKnown RBP eCLIP4.89□□□□□ -1.63
SCFD1-213ENST00000554776 ZGLP1P0C6A0 271 aa4.89□□□□□ -1.63
SCFD1-213ENST00000554776 CASP7P55210 303 aa4.89□□□□□ -1.63
SCFD1-213ENST00000554776 BBS9Q3SYG4 887 aa4.89□□□□□ -1.63
SCFD1-213ENST00000554776 AXDND1Q5T1B0 1012 aaPredicted RBP4.89□□□□□ -1.63
SCFD1-213ENST00000554776 FYB2Q5VWT5 728 aa4.89□□□□□ -1.63
SCFD1-213ENST00000554776 ZSWIM9Q86XI8 627 aa4.89□□□□□ -1.63
SCFD1-213ENST00000554776 CCDC144CPQ8IYA2 1237 aa4.89□□□□□ -1.63
SCFD1-213ENST00000554776 LINC00116Q8NCU8 138 aa4.89□□□□□ -1.63
SCFD1-213ENST00000554776 FAM168AQ92567 244 aa4.89□□□□□ -1.63
SCFD1-213ENST00000554776 ZNF408Q9H9D4 720 aa4.89□□□□□ -1.63
SCFD1-213ENST00000554776 CHST7Q9NS84 486 aa4.89□□□□□ -1.63
SCFD1-213ENST00000554776 GFOD1Q9NXC2 390 aa4.89□□□□□ -1.63
SCFD1-213ENST00000554776 FBXL21Q9UKT6 434 aa4.89□□□□□ -1.63
SCFD1-213ENST00000554776 RNF114Q9Y508 228 aa4.89□□□□□ -1.63
SCFD1-213ENST00000554776 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.89□□□□□ -1.63
SCFD1-213ENST00000554776 SMAD7O15105 426 aaKnown RBP4.88□□□□□ -1.63
SCFD1-213ENST00000554776 HPXP02790 462 aa4.88□□□□□ -1.63
SCFD1-213ENST00000554776 ETFBP38117 255 aa4.88□□□□□ -1.63
SCFD1-213ENST00000554776 HK2P52789 917 aa4.88□□□□□ -1.63
SCFD1-213ENST00000554776 PCBP3P57721 371 aaKnown RBP4.88□□□□□ -1.63
SCFD1-213ENST00000554776 DCAF15Q66K64 600 aa4.88□□□□□ -1.63
SCFD1-213ENST00000554776 PDZD8Q8NEN9 1154 aa4.88□□□□□ -1.63
SCFD1-213ENST00000554776 DHX38Q92620 1227 aaKnown RBP4.88□□□□□ -1.63
SCFD1-213ENST00000554776 KIRREL1Q96J84 757 aa4.88□□□□□ -1.63
SCFD1-213ENST00000554776 G6PC3Q9BUM1 346 aa4.88□□□□□ -1.63
SCFD1-213ENST00000554776 FOXP3Q9BZS1 431 aa4.88□□□□□ -1.63
SCFD1-213ENST00000554776 PHAXQ9H814 394 aaKnown RBP4.88□□□□□ -1.63
SCFD1-213ENST00000554776 SP110Q9HB58 689 aa4.88□□□□□ -1.63
SCFD1-213ENST00000554776 PRKAG3Q9UGI9 489 aa4.88□□□□□ -1.63
SCFD1-213ENST00000554776 TCFL5Q9UL49 500 aa4.88□□□□□ -1.63
SCFD1-213ENST00000554776 MINPP1Q9UNW1 487 aa4.88□□□□□ -1.63
SCFD1-213ENST00000554776 TMEM82A0PJX8 343 aa4.87□□□□□ -1.63
SCFD1-213ENST00000554776 TP53P04637 393 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-213ENST00000554776 BMP8BP34820 402 aa4.87□□□□□ -1.63
SCFD1-213ENST00000554776 CTSKP43235 329 aa4.87□□□□□ -1.63
SCFD1-213ENST00000554776 ERVFC1P60507 584 aa4.87□□□□□ -1.63
SCFD1-213ENST00000554776 KCNMB1Q16558 191 aa4.87□□□□□ -1.63
SCFD1-213ENST00000554776 TNNI3KQ59H18 835 aa4.87□□□□□ -1.63
SCFD1-213ENST00000554776 LINC01599Q8WXQ3 324 aa4.87□□□□□ -1.63
SCFD1-213ENST00000554776 KLHL6Q8WZ60 621 aa4.87□□□□□ -1.63
SCFD1-213ENST00000554776 SYTL4Q96C24 671 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-213ENST00000554776 GP6Q9HCN6 339 aa4.87□□□□□ -1.63
SCFD1-213ENST00000554776 EBF1Q9UH73 591 aa4.87□□□□□ -1.63
SCFD1-213ENST00000554776 FITM1A5D6W6 292 aa4.86□□□□□ -1.63
SCFD1-213ENST00000554776 ZNF503-AS2A6NEH8 195 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms