RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.61□□□□□ -1.19
SYNE2-210ENST00000553455 PCDHB12Q9Y5F1 795 aa7.61□□□□□ -1.19
SYNE2-210ENST00000553455 FAM170BA6NMN3 283 aa7.6□□□□□ -1.19
SYNE2-210ENST00000553455 TBX1O43435 398 aa7.6□□□□□ -1.19
SYNE2-210ENST00000553455 CYP7A1P22680 504 aa7.6□□□□□ -1.19
SYNE2-210ENST00000553455 ZNF445P59923 1031 aa7.6□□□□□ -1.19
SYNE2-210ENST00000553455 RASSF7Q02833 373 aa7.6□□□□□ -1.19
SYNE2-210ENST00000553455 LONRF2Q1L5Z9 754 aa7.6□□□□□ -1.19
SYNE2-210ENST00000553455 SFRP5Q5T4F7 317 aa7.6□□□□□ -1.19
SYNE2-210ENST00000553455 FOXB2Q5VYV0 432 aa7.6□□□□□ -1.19
SYNE2-210ENST00000553455 COX4I2Q96KJ9 171 aa7.6□□□□□ -1.19
SYNE2-210ENST00000553455 ANKRD62A6NC57 917 aa7.59□□□□□ -1.19
SYNE2-210ENST00000553455 AGRPO00253 132 aa7.59□□□□□ -1.19
SYNE2-210ENST00000553455 IGF2BP3O00425 579 aaKnown RBP eCLIP7.59□□□□□ -1.19
SYNE2-210ENST00000553455 F13BP05160 661 aa7.59□□□□□ -1.19
SYNE2-210ENST00000553455 ZNF865P0CJ78 1059 aaPredicted RBP7.59□□□□□ -1.19
SYNE2-210ENST00000553455 ITGA4P13612 1032 aa7.59□□□□□ -1.19
SYNE2-210ENST00000553455 PPP2R2AP63151 447 aa7.59□□□□□ -1.19
SYNE2-210ENST00000553455 TKFCQ3LXA3 575 aa7.59□□□□□ -1.19
SYNE2-210ENST00000553455 PLA2G4EQ3MJ16 856 aa7.59□□□□□ -1.19
SYNE2-210ENST00000553455 TMEM67Q5HYA8 995 aa7.59□□□□□ -1.19
SYNE2-210ENST00000553455 ZNF765Q7L2R6 523 aa7.59□□□□□ -1.19
SYNE2-210ENST00000553455 TMC3Q7Z5M5 1100 aa7.59□□□□□ -1.19
SYNE2-210ENST00000553455 ADAT2Q7Z6V5 191 aaKnown RBP7.59□□□□□ -1.19
SYNE2-210ENST00000553455 KIAA0907Q7Z7F0 614 aaPredicted RBP7.59□□□□□ -1.19
SYNE2-210ENST00000553455 LRRN4CLQ8ND94 238 aa7.59□□□□□ -1.19
SYNE2-210ENST00000553455 ZSWIM2Q8NEG5 633 aa7.59□□□□□ -1.19
SYNE2-210ENST00000553455 ADCY4Q8NFM4 1077 aa7.59□□□□□ -1.19
SYNE2-210ENST00000553455 RCC1LQ96I51 464 aaKnown RBP7.59□□□□□ -1.19
SYNE2-210ENST00000553455 MRGPRX3Q96LB0 322 aa7.59□□□□□ -1.19
SYNE2-210ENST00000553455 MFSD14AQ96MC6 490 aa7.59□□□□□ -1.19
SYNE2-210ENST00000553455 PRR13Q9NZ81 148 aa7.59□□□□□ -1.19
SYNE2-210ENST00000553455 FBXL21Q9UKT6 434 aa7.59□□□□□ -1.19
SYNE2-210ENST00000553455 FHOD1Q9Y613 1164 aa7.59□□□□□ -1.19
SYNE2-210ENST00000553455 CAPN6Q9Y6Q1 641 aa7.59□□□□□ -1.19
SYNE2-210ENST00000553455 U3KQE9 123 aa7.59□□□□□ -1.19
SYNE2-210ENST00000553455 A0A087WZG4 1122 aa7.58□□□□□ -1.2
SYNE2-210ENST00000553455 PPM1BO75688 479 aa7.58□□□□□ -1.2
SYNE2-210ENST00000553455 CBX7O95931 251 aa7.58□□□□□ -1.2
SYNE2-210ENST00000553455 KIR3DL1P43629 444 aa7.58□□□□□ -1.2
SYNE2-210ENST00000553455 YOD1Q5VVQ6 348 aaPredicted RBP7.58□□□□□ -1.2
SYNE2-210ENST00000553455 RNF43Q68DV7 783 aa7.58□□□□□ -1.2
SYNE2-210ENST00000553455 C16orf86Q6ZW13 317 aa7.58□□□□□ -1.2
SYNE2-210ENST00000553455 ARHGEF39Q8N4T4 335 aa7.58□□□□□ -1.2
SYNE2-210ENST00000553455 FBXL6Q8N531 539 aa7.58□□□□□ -1.2
SYNE2-210ENST00000553455 BVESQ8NE79 360 aa7.58□□□□□ -1.2
SYNE2-210ENST00000553455 BRF1Q92994 677 aa7.58□□□□□ -1.2
SYNE2-210ENST00000553455 EXOC2Q96KP1 924 aa7.58□□□□□ -1.2
SYNE2-210ENST00000553455 GFOD1Q9NXC2 390 aa7.58□□□□□ -1.2
SYNE2-210ENST00000553455 CGGBP1Q9UFW8 167 aaPredicted RBP7.58□□□□□ -1.2
SYNE2-210ENST00000553455 GTF2IRD1Q9UHL9 959 aa7.58□□□□□ -1.2
SYNE2-210ENST00000553455 SUGT1Q9Y2Z0 365 aa7.58□□□□□ -1.2
SYNE2-210ENST00000553455 EMC9Q9Y3B6 208 aa7.58□□□□□ -1.2
SYNE2-210ENST00000553455 GRIA2P42262 883 aa7.57□□□□□ -1.2
SYNE2-210ENST00000553455 TNK2Q07912 1038 aa7.57□□□□□ -1.2
SYNE2-210ENST00000553455 TRIM59Q8IWR1 403 aa7.57□□□□□ -1.2
SYNE2-210ENST00000553455 SYTL5Q8TDW5 730 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-210ENST00000553455 KISS1RQ969F8 398 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-210ENST00000553455 PPP1R14AQ96A00 147 aa7.57□□□□□ -1.2
SYNE2-210ENST00000553455 AARSD1Q9BTE6 412 aaKnown RBP7.57□□□□□ -1.2
SYNE2-210ENST00000553455 LRP2BPQ9P2M1 347 aa7.57□□□□□ -1.2
SYNE2-210ENST00000553455 MINPP1Q9UNW1 487 aa7.57□□□□□ -1.2
SYNE2-210ENST00000553455 SHISA3A0PJX4 238 aa7.56□□□□□ -1.2
SYNE2-210ENST00000553455 SIGLEC6O43699 453 aa7.56□□□□□ -1.2
SYNE2-210ENST00000553455 PRAMEF1O95521 474 aa7.56□□□□□ -1.2
SYNE2-210ENST00000553455 NFIAQ12857 509 aa7.56□□□□□ -1.2
SYNE2-210ENST00000553455 HSP90AA2PQ14568 343 aaPredicted RBP7.56□□□□□ -1.2
SYNE2-210ENST00000553455 CYP27C1Q4G0S4 372 aa7.56□□□□□ -1.2
SYNE2-210ENST00000553455 ZC3H12BQ5HYM0 836 aaKnown RBP7.56□□□□□ -1.2
SYNE2-210ENST00000553455 MFSD4AQ8N468 514 aa7.56□□□□□ -1.2
SYNE2-210ENST00000553455 FIBCD1Q8N539 461 aa7.56□□□□□ -1.2
SYNE2-210ENST00000553455 PUS7Q96PZ0 661 aaKnown RBP7.56□□□□□ -1.2
SYNE2-210ENST00000553455 SLC26A8Q96RN1 970 aa7.56□□□□□ -1.2
SYNE2-210ENST00000553455 NOL6Q9H6R4 1146 aaKnown RBP7.56□□□□□ -1.2
SYNE2-210ENST00000553455 AKT3Q9Y243 479 aa7.56□□□□□ -1.2
SYNE2-210ENST00000553455 TRAV20A0A0B4J274 112 aa7.55□□□□□ -1.2
SYNE2-210ENST00000553455 PPP1R12AO14974 1030 aaPredicted RBP7.55□□□□□ -1.2
SYNE2-210ENST00000553455 ASMTLO95671 621 aa7.55□□□□□ -1.2
SYNE2-210ENST00000553455 L1CAMP32004 1257 aa7.55□□□□□ -1.2
SYNE2-210ENST00000553455 OXCT1P55809 520 aa7.55□□□□□ -1.2
SYNE2-210ENST00000553455 CYP27A1Q02318 531 aa7.55□□□□□ -1.2
SYNE2-210ENST00000553455 NMIQ13287 307 aaPredicted RBP7.55□□□□□ -1.2
SYNE2-210ENST00000553455 FAM209AQ5JX71 171 aa7.55□□□□□ -1.2
SYNE2-210ENST00000553455 NOL9Q5SY16 702 aaKnown RBP7.55□□□□□ -1.2
SYNE2-210ENST00000553455 PIWIL2Q8TC59 973 aaKnown RBP7.55□□□□□ -1.2
SYNE2-210ENST00000553455 BTN2A2Q8WVV5 523 aa7.55□□□□□ -1.2
SYNE2-210ENST00000553455 FEZ1Q99689 392 aa7.55□□□□□ -1.2
SYNE2-210ENST00000553455 DBNDD2Q9BQY9 259 aa7.55□□□□□ -1.2
SYNE2-210ENST00000553455 HDAC8Q9BY41 377 aa7.55□□□□□ -1.2
SYNE2-210ENST00000553455 KCNH3Q9ULD8 1083 aa7.55□□□□□ -1.2
SYNE2-210ENST00000553455 NOP56O00567 594 aaKnown RBP7.54□□□□□ -1.2
SYNE2-210ENST00000553455 CLSTN1O94985 981 aa7.54□□□□□ -1.2
SYNE2-210ENST00000553455 FGFR1P11362 822 aa7.54□□□□□ -1.2
SYNE2-210ENST00000553455 SRFP11831 508 aa7.54□□□□□ -1.2
SYNE2-210ENST00000553455 GRB10Q13322 594 aa7.54□□□□□ -1.2
SYNE2-210ENST00000553455 PPP2R5DQ14738 602 aa7.54□□□□□ -1.2
SYNE2-210ENST00000553455 OSBP2Q969R2 916 aa7.54□□□□□ -1.2
SYNE2-210ENST00000553455 CHST7Q9NS84 486 aa7.54□□□□□ -1.2
SYNE2-210ENST00000553455 DIS3Q9Y2L1 958 aaKnown RBP7.54□□□□□ -1.2
SYNE2-210ENST00000553455 CD2APQ9Y5K6 639 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms