RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 MAP2K7O14733 419 aa13.97□□□□□ -0.17
HDAC7-230ENST00000552960 SRLQ86TD4 932 aa13.97□□□□□ -0.17
HDAC7-230ENST00000552960 TMEM87BQ96K49 555 aa13.97□□□□□ -0.17
HDAC7-230ENST00000552960 ARMT1Q9H993 441 aa13.97□□□□□ -0.17
HDAC7-230ENST00000552960 CTNND2Q9UQB3 1225 aa13.97□□□□□ -0.17
HDAC7-230ENST00000552960 LRP5O75197 1615 aa13.97□□□□□ -0.17
HDAC7-230ENST00000552960 A0A1B0GTH6 734 aa13.96□□□□□ -0.17
HDAC7-230ENST00000552960 TDO2P48775 406 aa13.96□□□□□ -0.17
HDAC7-230ENST00000552960 TPTE2Q6XPS3 522 aa13.96□□□□□ -0.17
HDAC7-230ENST00000552960 NAPGQ99747 312 aaPredicted RBP13.96□□□□□ -0.17
HDAC7-230ENST00000552960 RABEP2Q9H5N1 569 aa13.96□□□□□ -0.17
HDAC7-230ENST00000552960 TFR2Q9UP52 801 aa13.96□□□□□ -0.17
HDAC7-230ENST00000552960 BAZ2BQ9UIF8 2168 aaKnown RBP13.96□□□□□ -0.17
HDAC7-230ENST00000552960 TCRBV5S4A2TA0A5A2 114 aa13.96□□□□□ -0.17
HDAC7-230ENST00000552960 ERICH2A1L162 156 aa13.96□□□□□ -0.17
HDAC7-230ENST00000552960 PRDM1O75626 825 aa13.96□□□□□ -0.17
HDAC7-230ENST00000552960 MBD4O95243 580 aa13.96□□□□□ -0.17
HDAC7-230ENST00000552960 GYS1P13807 737 aa13.96□□□□□ -0.17
HDAC7-230ENST00000552960 RILPL1Q5EBL4 403 aa13.96□□□□□ -0.17
HDAC7-230ENST00000552960 MFSD6Q6ZSS7 791 aa13.96□□□□□ -0.17
HDAC7-230ENST00000552960 PANX2Q96RD6 677 aa13.96□□□□□ -0.17
HDAC7-230ENST00000552960 TAB2Q9NYJ8 693 aa13.96□□□□□ -0.17
HDAC7-230ENST00000552960 VPS54Q9P1Q0 977 aa13.96□□□□□ -0.17
HDAC7-230ENST00000552960 TRIM10Q9UDY6 481 aa13.96□□□□□ -0.17
HDAC7-230ENST00000552960 BRWD3Q6RI45 1802 aa13.96□□□□□ -0.17
HDAC7-230ENST00000552960 RPS8P62241 208 aaKnown RBP13.96□□□□□ -0.18
HDAC7-230ENST00000552960 WTAPQ15007 396 aa13.96□□□□□ -0.18
HDAC7-230ENST00000552960 WASF1Q92558 559 aa13.96□□□□□ -0.18
HDAC7-230ENST00000552960 L1RE1Q9UN81 338 aa13.96□□□□□ -0.18
HDAC7-230ENST00000552960 CICQ96RK0 1608 aaPredicted RBP13.96□□□□□ -0.18
HDAC7-230ENST00000552960 C4BP0C0L5 1744 aa13.95□□□□□ -0.18
HDAC7-230ENST00000552960 MFAP3LO75121 409 aa13.95□□□□□ -0.18
HDAC7-230ENST00000552960 ZNF174Q15697 407 aa13.95□□□□□ -0.18
HDAC7-230ENST00000552960 SPATA1Q5VX52 437 aa13.95□□□□□ -0.18
HDAC7-230ENST00000552960 EEF2KMTQ96G04 330 aa13.95□□□□□ -0.18
HDAC7-230ENST00000552960 FAM204AQ9H8W3 233 aa13.95□□□□□ -0.18
HDAC7-230ENST00000552960 BSDC1Q9NW68 430 aaPredicted RBP13.95□□□□□ -0.18
HDAC7-230ENST00000552960 HDAC6Q9UBN7 1215 aa13.95□□□□□ -0.18
HDAC7-230ENST00000552960 COL1A1P02452 1464 aaPredicted RBP13.95□□□□□ -0.18
HDAC7-230ENST00000552960 A0A087X0B3 334 aa13.95□□□□□ -0.18
HDAC7-230ENST00000552960 FAM237AA0A1B0GTK4 181 aa13.95□□□□□ -0.18
HDAC7-230ENST00000552960 MINDY4BA8MYZ0 360 aa13.95□□□□□ -0.18
HDAC7-230ENST00000552960 ACTN4O43707 911 aaKnown RBP13.95□□□□□ -0.18
HDAC7-230ENST00000552960 FMNL1O95466 1100 aaPredicted RBP13.95□□□□□ -0.18
HDAC7-230ENST00000552960 TXNRD1Q16881 649 aa13.95□□□□□ -0.18
HDAC7-230ENST00000552960 SLC10A5Q5PT55 438 aa13.95□□□□□ -0.18
HDAC7-230ENST00000552960 GYPCP04921 128 aa13.94□□□□□ -0.18
HDAC7-230ENST00000552960 SLC20A2Q08357 652 aa13.94□□□□□ -0.18
HDAC7-230ENST00000552960 RRAGBQ5VZM2 374 aa13.94□□□□□ -0.18
HDAC7-230ENST00000552960 KANK3Q6NY19 840 aa13.94□□□□□ -0.18
HDAC7-230ENST00000552960 FAM84BQ96KN1 310 aaPredicted RBP13.94□□□□□ -0.18
HDAC7-230ENST00000552960 TACC3Q9Y6A5 838 aa13.94□□□□□ -0.18
HDAC7-230ENST00000552960 POTEB2H3BUK9 544 aa13.94□□□□□ -0.18
HDAC7-230ENST00000552960 SRGAP2O75044 1071 aa13.94□□□□□ -0.18
HDAC7-230ENST00000552960 KRT9P35527 623 aa13.94□□□□□ -0.18
HDAC7-230ENST00000552960 SARSP49591 514 aaKnown RBP13.94□□□□□ -0.18
HDAC7-230ENST00000552960 GTF2A1P52655 376 aaPredicted RBP13.94□□□□□ -0.18
HDAC7-230ENST00000552960 SART3Q15020 963 aaKnown RBP13.94□□□□□ -0.18
HDAC7-230ENST00000552960 PRR5LQ6MZQ0 368 aa13.94□□□□□ -0.18
HDAC7-230ENST00000552960 CNGA4Q8IV77 575 aa13.94□□□□□ -0.18
HDAC7-230ENST00000552960 IFNL3Q8IZI9 196 aa13.94□□□□□ -0.18
HDAC7-230ENST00000552960 RIN2Q8WYP3 895 aaPredicted RBP13.94□□□□□ -0.18
HDAC7-230ENST00000552960 SYMPKQ92797 1274 aaKnown RBP13.94□□□□□ -0.18
HDAC7-230ENST00000552960 ADD3Q9UEY8 706 aaKnown RBP13.94□□□□□ -0.18
HDAC7-230ENST00000552960 TAF1LQ8IZX4 1826 aa13.94□□□□□ -0.18
HDAC7-230ENST00000552960 TRIM75PA6NK02 468 aa13.94□□□□□ -0.18
HDAC7-230ENST00000552960 LRRIQ3A6PVS8 624 aaPredicted RBP13.94□□□□□ -0.18
HDAC7-230ENST00000552960 RNF225M0QZC1 329 aaPredicted RBP13.94□□□□□ -0.18
HDAC7-230ENST00000552960 EVX2Q03828 476 aa13.94□□□□□ -0.18
HDAC7-230ENST00000552960 CEP131Q9UPN4 1083 aa13.94□□□□□ -0.18
HDAC7-230ENST00000552960 SRPRBQ9Y5M8 271 aaKnown RBP13.94□□□□□ -0.18
HDAC7-230ENST00000552960 IVLP07476 585 aa13.93□□□□□ -0.18
HDAC7-230ENST00000552960 IFNAR1P17181 557 aa13.93□□□□□ -0.18
HDAC7-230ENST00000552960 ERCC5P28715 1186 aaPredicted RBP13.93□□□□□ -0.18
HDAC7-230ENST00000552960 LCORLQ8N3X6 602 aa13.93□□□□□ -0.18
HDAC7-230ENST00000552960 ZNF384Q8TF68 577 aa13.93□□□□□ -0.18
HDAC7-230ENST00000552960 EPB41L4AQ9HCS5 686 aaPredicted RBP13.93□□□□□ -0.18
HDAC7-230ENST00000552960 MYO6Q9UM54 1294 aa13.93□□□□□ -0.18
HDAC7-230ENST00000552960 SCN7AQ01118 1682 aa13.93□□□□□ -0.18
HDAC7-230ENST00000552960 ERVK-24P63145 666 aa13.93□□□□□ -0.18
HDAC7-230ENST00000552960 DDR1Q08345 913 aa13.93□□□□□ -0.18
HDAC7-230ENST00000552960 NOM1Q5C9Z4 860 aaKnown RBP13.93□□□□□ -0.18
HDAC7-230ENST00000552960 RASGRP2Q7LDG7 609 aa13.93□□□□□ -0.18
HDAC7-230ENST00000552960 GSPT2Q8IYD1 628 aaKnown RBP13.93□□□□□ -0.18
HDAC7-230ENST00000552960 CNBD1Q8NA66 436 aa13.93□□□□□ -0.18
HDAC7-230ENST00000552960 PAGE5Q96GU1 130 aa13.93□□□□□ -0.18
HDAC7-230ENST00000552960 ZNF512BQ96KM6 892 aaPredicted RBP13.93□□□□□ -0.18
HDAC7-230ENST00000552960 STRBPQ96SI9 672 aaKnown RBP13.93□□□□□ -0.18
HDAC7-230ENST00000552960 CHP1Q99653 195 aa13.93□□□□□ -0.18
HDAC7-230ENST00000552960 LRP2BPQ9P2M1 347 aa13.93□□□□□ -0.18
HDAC7-230ENST00000552960 RTL9Q8NET4 1388 aa13.93□□□□□ -0.18
HDAC7-230ENST00000552960 LY75O60449 1722 aa13.93□□□□□ -0.18
HDAC7-230ENST00000552960 TNRC6CQ9HCJ0 1690 aaKnown RBP13.92□□□□□ -0.18
HDAC7-230ENST00000552960 UQCRFS1P1P0C7P4 283 aa13.92□□□□□ -0.18
HDAC7-230ENST00000552960 TRIML1Q8N9V2 468 aa13.92□□□□□ -0.18
HDAC7-230ENST00000552960 CCDC148Q8NFR7 591 aa13.92□□□□□ -0.18
HDAC7-230ENST00000552960 CAGE1Q8TC20 777 aa13.92□□□□□ -0.18
HDAC7-230ENST00000552960 CTAGE1Q96RT6 745 aa13.92□□□□□ -0.18
HDAC7-230ENST00000552960 UBAC1Q9BSL1 405 aa13.92□□□□□ -0.18
HDAC7-230ENST00000552960 NYXQ9GZU5 481 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms