RNA–Protein interactions for RNA: ENST00000552561.5

TMEM106C-220, Transcript of transmembrane protein 106C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106C, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-220ENST00000552561 FRAT1Q92837 279 aaPredicted RBP5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 KHSRPQ92945 711 aaKnown RBP eCLIP5.39□□□□□ -1.551e-6■■■■□ 21.2
TMEM106C-220ENST00000552561 CLUAP1Q96AJ1 413 aa5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 KIF1BPQ96EK5 621 aa5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 PAWRQ96IZ0 340 aaKnown RBP5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 PORCNQ9H237 461 aa5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 ZBTB40Q9NUA8 1239 aa5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 TMOD4Q9NZQ9 345 aa5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 NRBP1Q9UHY1 535 aa5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 PALD1Q9ULE6 856 aa5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 SYNPO2Q9UMS6 1093 aa5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 MYO9BQ13459 2157 aa5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 SPDYE16A6NNV3 312 aaPredicted RBP5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 RAB11FIP3O75154 756 aa5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 GLRX3O76003 335 aaKnown RBP5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 GH2P01242 217 aa5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 SYN1P17600 705 aa5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 ATP5JP18859 108 aa5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 CYP7A1P22680 504 aa5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 PTPREP23469 700 aa5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 PLCD1P51178 756 aa5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 DYNLL1P63167 89 aaKnown RBP5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 MRPS5P82675 430 aaKnown RBP5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 CACNB2Q08289 660 aaPredicted RBP5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 UBE3CQ15386 1083 aa5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 SHROOM1Q2M3G4 852 aaPredicted RBP5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 OLFML2BQ68BL8 750 aa5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 TMEM179Q6ZVK1 233 aa5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 PLEKHH3Q7Z736 793 aa5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 SIAH1Q8IUQ4 282 aa5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 CRACR2BQ8N4Y2 399 aaPredicted RBP5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 MB21D1Q8N884 522 aa5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 CCDC17Q96LX7 622 aa5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 GAS2L1Q99501 681 aaPredicted RBP5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 CHMP4BQ9H444 224 aaKnown RBP5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 C11orf49Q9H6J7 331 aa5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 ANTXR1Q9H6X2 564 aa5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 DCP1AQ9NPI6 582 aaPredicted RBP5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 SNRKQ9NRH2 765 aa5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 ATP8A2Q9NTI2 1148 aa5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 HOXC10Q9NYD6 342 aa5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 SWAP70Q9UH65 585 aa5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 DDX19BQ9UMR2 479 aa5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 DIS3Q9Y2L1 958 aaKnown RBP5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 TMX2Q9Y320 296 aa5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 DNAH12Q6ZR08 3092 aa5.38□□□□□ -1.55
TMEM106C-220ENST00000552561 SPTBN4Q9H254 2564 aa5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 NAV1Q8NEY1 1877 aa5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 A0A1W2PRG0 241 aa5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 DNM1LO00429 736 aa5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 ATP2A1O14983 1001 aa5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 IDH1O75874 414 aaKnown RBP5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 GDF11O95390 407 aa5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 CYBAP13498 195 aa5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 PDE6AP16499 860 aa5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 ZKSCAN1P17029 563 aaPredicted RBP5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 ADD2P35612 726 aa5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 TRIM32Q13049 653 aa5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 PDE3AQ14432 1141 aa5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 COG2Q14746 738 aa5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 ABCB5Q2M3G0 1257 aa5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 CERKLQ49MI3 558 aaPredicted RBP5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 SBK1Q52WX2 424 aa5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 GIMAP6Q6P9H5 292 aa5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 TICAM2Q86XR7 235 aa5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 FTSJ3Q8IY81 847 aaKnown RBP5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 CLASRPQ8N2M8 674 aaKnown RBP5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 MAGEB6Q8N7X4 407 aa5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 DIS3LQ8TF46 1054 aaKnown RBP5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 EDC3Q96F86 508 aaKnown RBP5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 MFRPQ9BY79 579 aa5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 CCDC8Q9H0W5 538 aaPredicted RBP5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 MROH8Q9H579 483 aa5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 CABP5Q9NP86 173 aa5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 BTBD7Q9P203 1132 aa5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 STK24Q9Y6E0 443 aa5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 LTBP2Q14767 1821 aa5.37□□□□□ -1.55
TMEM106C-220ENST00000552561 MAGEB6P1A0A0J9YX57 407 aa5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 HMMRO75330 724 aa5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 CYP2B6P20813 491 aa5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 NKX3-2P78367 333 aa5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 OS9Q13438 667 aaPredicted RBP5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 CCL14Q16627 93 aa5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 SLC9C2Q5TAH2 1124 aa5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 C12orf60Q5U649 245 aa5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 MFSD14CQ5VZR4 134 aa5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 C16orf86Q6ZW13 317 aa5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 AACSQ86V21 672 aa5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 ITPRIPQ8IWB1 547 aa5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 MSL3Q8N5Y2 521 aaKnown RBP5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 MIGA1Q8NAN2 632 aa5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 REPS2Q8NFH8 660 aa5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 ACER1Q8TDN7 264 aa5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 ASB2Q96Q27 587 aa5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 HAUS7Q99871 368 aa5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 MOV10L1Q9BXT6 1211 aaKnown RBP5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 CRNKL1Q9BZJ0 848 aaKnown RBP5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 SPATC1LQ9H0A9 340 aa5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 SH2D4AQ9H788 454 aa5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 VCPKMTQ9H867 229 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms