RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 WWC2Q6AWC2 1192 aa22.67■■□□□ 1.22
SSH1-209ENST00000551165 CLIC6Q96NY7 704 aa22.67■■□□□ 1.22
SSH1-209ENST00000551165 VEZTQ9HBM0 779 aa22.67■■□□□ 1.22
SSH1-209ENST00000551165 MRVI1Q9Y6F6 885 aa22.67■■□□□ 1.22
SSH1-209ENST00000551165 CNTNAP1P78357 1384 aa22.67■■□□□ 1.22
SSH1-209ENST00000551165 FOXP4Q8IVH2 680 aaPredicted RBP22.67■■□□□ 1.22
SSH1-209ENST00000551165 DDX19AQ9NUU7 478 aaKnown RBP22.67■■□□□ 1.22
SSH1-209ENST00000551165 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.66■■□□□ 1.22
SSH1-209ENST00000551165 NDUFA8P51970 172 aa22.66■■□□□ 1.22
SSH1-209ENST00000551165 SPDYE2Q495Y8 402 aa22.66■■□□□ 1.22
SSH1-209ENST00000551165 METTL16Q86W50 562 aaKnown RBP22.66■■□□□ 1.22
SSH1-209ENST00000551165 HOMER1Q86YM7 354 aa22.66■■□□□ 1.22
SSH1-209ENST00000551165 SIAH1Q8IUQ4 282 aa22.66■■□□□ 1.22
SSH1-209ENST00000551165 TNMDQ9H2S6 317 aa22.66■■□□□ 1.22
SSH1-209ENST00000551165 SEPT2Q15019 361 aa22.65■■□□□ 1.22
SSH1-209ENST00000551165 HEATR3Q7Z4Q2 680 aa22.65■■□□□ 1.22
SSH1-209ENST00000551165 MRPS27Q92552 414 aaKnown RBP22.65■■□□□ 1.22
SSH1-209ENST00000551165 CCDC17Q96LX7 622 aa22.65■■□□□ 1.22
SSH1-209ENST00000551165 TRIM34Q9BYJ4 488 aa22.65■■□□□ 1.22
SSH1-209ENST00000551165 GPCPD1Q9NPB8 672 aa22.65■■□□□ 1.22
SSH1-209ENST00000551165 LETM1O95202 739 aaPredicted RBP22.65■■□□□ 1.22
SSH1-209ENST00000551165 SPZ1Q9BXG8 430 aa22.65■■□□□ 1.22
SSH1-209ENST00000551165 TMOD2Q9NZR1 351 aa22.65■■□□□ 1.22
SSH1-209ENST00000551165 A0A1W2PQ27 194 aa22.64■■□□□ 1.22
SSH1-209ENST00000551165 A0A1W2PQ64 194 aa22.64■■□□□ 1.22
SSH1-209ENST00000551165 A0A1W2PQD8 194 aa22.64■■□□□ 1.22
SSH1-209ENST00000551165 SNHG28P0DPA3 235 aa22.64■■□□□ 1.22
SSH1-209ENST00000551165 EEF2P13639 858 aaKnown RBP22.64■■□□□ 1.22
SSH1-209ENST00000551165 GRIN1Q05586 938 aa22.64■■□□□ 1.22
SSH1-209ENST00000551165 RILPL1Q5EBL4 403 aa22.64■■□□□ 1.22
SSH1-209ENST00000551165 TTBK2Q6IQ55 1244 aa22.64■■□□□ 1.22
SSH1-209ENST00000551165 TMEM39BQ9GZU3 492 aa22.64■■□□□ 1.22
SSH1-209ENST00000551165 MYH4Q9Y623 1939 aa22.64■■□□□ 1.22
SSH1-209ENST00000551165 WNT10BO00744 389 aa22.64■■□□□ 1.21
SSH1-209ENST00000551165 FAM160A1Q05DH4 1040 aa22.64■■□□□ 1.21
SSH1-209ENST00000551165 MAP3K11Q16584 847 aa22.64■■□□□ 1.21
SSH1-209ENST00000551165 CCDC73Q6ZRK6 1079 aa22.64■■□□□ 1.21
SSH1-209ENST00000551165 FMR1NBQ8N0W7 255 aaPredicted RBP22.64■■□□□ 1.21
SSH1-209ENST00000551165 RASGRP4Q8TDF6 673 aa22.64■■□□□ 1.21
SSH1-209ENST00000551165 ZBED3Q96IU2 234 aaPredicted RBP22.64■■□□□ 1.21
SSH1-209ENST00000551165 PIGSQ96S52 555 aa22.64■■□□□ 1.21
SSH1-209ENST00000551165 STXBP3O00186 592 aa22.63■■□□□ 1.21
SSH1-209ENST00000551165 RBM26Q5T8P6 1007 aaKnown RBP22.63■■□□□ 1.21
SSH1-209ENST00000551165 SHC4Q6S5L8 630 aa22.63■■□□□ 1.21
SSH1-209ENST00000551165 LZTS2Q9BRK4 669 aa22.63■■□□□ 1.21
SSH1-209ENST00000551165 PPP6R2O75170 966 aa22.63■■□□□ 1.21
SSH1-209ENST00000551165 FAM151AQ8WW52 585 aa22.63■■□□□ 1.21
SSH1-209ENST00000551165 MYOZ2Q9NPC6 264 aa22.63■■□□□ 1.21
SSH1-209ENST00000551165 SPECC1Q5M775 1068 aa22.62■■□□□ 1.21
SSH1-209ENST00000551165 MTMR14Q8NCE2 650 aa22.62■■□□□ 1.21
SSH1-209ENST00000551165 ERCC4Q92889 916 aaPredicted RBP22.62■■□□□ 1.21
SSH1-209ENST00000551165 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.62■■□□□ 1.21
SSH1-209ENST00000551165 ABCB5Q2M3G0 1257 aa22.62■■□□□ 1.21
SSH1-209ENST00000551165 PIK3AP1Q6ZUJ8 805 aa22.62■■□□□ 1.21
SSH1-209ENST00000551165 KCTD1Q719H9 257 aa22.62■■□□□ 1.21
SSH1-209ENST00000551165 BARHL2Q9NY43 387 aa22.62■■□□□ 1.21
SSH1-209ENST00000551165 RAD21O60216 631 aa22.61■■□□□ 1.21
SSH1-209ENST00000551165 GH2P01242 217 aa22.61■■□□□ 1.21
SSH1-209ENST00000551165 SLC16A2P36021 539 aa22.61■■□□□ 1.21
SSH1-209ENST00000551165 ZNF543Q08ER8 600 aa22.61■■□□□ 1.21
SSH1-209ENST00000551165 RBM43Q6ZSC3 357 aaKnown RBP22.61■■□□□ 1.21
SSH1-209ENST00000551165 RIOX1Q9H6W3 641 aa22.61■■□□□ 1.21
SSH1-209ENST00000551165 BRMS1Q9HCU9 246 aa22.61■■□□□ 1.21
SSH1-209ENST00000551165 PFKFB1P16118 471 aa22.61■■□□□ 1.21
SSH1-209ENST00000551165 BLIDQ8IZY5 108 aa22.61■■□□□ 1.21
SSH1-209ENST00000551165 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.61■■□□□ 1.21
SSH1-209ENST00000551165 SH3GLB2Q9NR46 395 aa22.61■■□□□ 1.21
SSH1-209ENST00000551165 GJA3Q9Y6H8 435 aa22.61■■□□□ 1.21
SSH1-209ENST00000551165 COL2A1P02458 1487 aaPredicted RBP22.6■■□□□ 1.21
SSH1-209ENST00000551165 CMA1P23946 247 aa22.6■■□□□ 1.21
SSH1-209ENST00000551165 TNIP1Q15025 636 aa22.6■■□□□ 1.21
SSH1-209ENST00000551165 MIGA2Q7L4E1 593 aa22.6■■□□□ 1.21
SSH1-209ENST00000551165 KANSL2Q9H9L4 492 aa22.6■■□□□ 1.21
SSH1-209ENST00000551165 ASTN2O75129 1339 aaPredicted RBP22.6■■□□□ 1.21
SSH1-209ENST00000551165 ASPRV1Q53RT3 343 aa22.6■■□□□ 1.21
SSH1-209ENST00000551165 RRP36Q96EU6 259 aaKnown RBP22.6■■□□□ 1.21
SSH1-209ENST00000551165 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.6■■□□□ 1.21
SSH1-209ENST00000551165 FBXO2Q9UK22 296 aaPredicted RBP22.6■■□□□ 1.21
SSH1-209ENST00000551165 PCDHA4Q9UN74 947 aa22.6■■□□□ 1.21
SSH1-209ENST00000551165 LTBP3Q9NS15 1303 aa22.6■■□□□ 1.21
SSH1-209ENST00000551165 A0A087WWV3 80 aa22.59■■□□□ 1.21
SSH1-209ENST00000551165 M0R2N6 131 aa22.59■■□□□ 1.21
SSH1-209ENST00000551165 GMPSP49915 693 aaPredicted RBP22.59■■□□□ 1.21
SSH1-209ENST00000551165 ICA1Q05084 483 aa22.59■■□□□ 1.21
SSH1-209ENST00000551165 ZNF174Q15697 407 aa22.59■■□□□ 1.21
SSH1-209ENST00000551165 TMEM179Q6ZVK1 233 aa22.59■■□□□ 1.21
SSH1-209ENST00000551165 SAMD7Q7Z3H4 446 aa22.59■■□□□ 1.21
SSH1-209ENST00000551165 KINO60870 393 aaKnown RBP22.58■■□□□ 1.21
SSH1-209ENST00000551165 CCDC96Q2M329 555 aa22.58■■□□□ 1.21
SSH1-209ENST00000551165 MKL1Q969V6 931 aa22.58■■□□□ 1.21
SSH1-209ENST00000551165 NYAP2Q9P242 653 aa22.58■■□□□ 1.21
SSH1-209ENST00000551165 PGAP2Q9UHJ9 254 aa22.58■■□□□ 1.21
SSH1-209ENST00000551165 ZNF541Q9H0D2 1346 aa22.58■■□□□ 1.21
SSH1-209ENST00000551165 TRIM75PA6NK02 468 aa22.58■■□□□ 1.21
SSH1-209ENST00000551165 FZD9O00144 591 aa22.58■■□□□ 1.21
SSH1-209ENST00000551165 ADGRF4Q8IZF3 695 aa22.58■■□□□ 1.21
SSH1-209ENST00000551165 JMYQ8N9B5 988 aa22.58■■□□□ 1.21
SSH1-209ENST00000551165 JMJD4Q9H9V9 463 aa22.58■■□□□ 1.21
SSH1-209ENST00000551165 CALML3P27482 149 aa22.57■■□□□ 1.2
SSH1-209ENST00000551165 SMARCA1P28370 1054 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms