RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 ARHGEF10LQ9HCE6 1279 aa13.9□□□□□ -0.18
PRPF40B-212ENST00000551111 ADAMTS5Q9UNA0 930 aa13.9□□□□□ -0.18
PRPF40B-212ENST00000551111 WDR46O15213 610 aaKnown RBP13.89□□□□□ -0.19
PRPF40B-212ENST00000551111 STRNO43815 780 aa13.89□□□□□ -0.19
PRPF40B-212ENST00000551111 PGK2P07205 417 aa13.89□□□□□ -0.19
PRPF40B-212ENST00000551111 TAL1P17542 331 aaPredicted RBP13.89□□□□□ -0.19
PRPF40B-212ENST00000551111 RASA1P20936 1047 aa13.89□□□□□ -0.19
PRPF40B-212ENST00000551111 FAM83BQ5T0W9 1011 aa13.89□□□□□ -0.19
PRPF40B-212ENST00000551111 OLFML2BQ68BL8 750 aa13.89□□□□□ -0.19
PRPF40B-212ENST00000551111 REPS2Q8NFH8 660 aa13.89□□□□□ -0.19
PRPF40B-212ENST00000551111 CCDC17Q96LX7 622 aa13.89□□□□□ -0.19
PRPF40B-212ENST00000551111 EPB41L4AQ9HCS5 686 aaPredicted RBP13.89□□□□□ -0.19
PRPF40B-212ENST00000551111 ECHDC1Q9NTX5 307 aa13.89□□□□□ -0.19
PRPF40B-212ENST00000551111 M0R2C6 588 aa13.88□□□□□ -0.19
PRPF40B-212ENST00000551111 RTP1P59025 263 aa13.88□□□□□ -0.19
PRPF40B-212ENST00000551111 LRIT3Q3SXY7 679 aa13.88□□□□□ -0.19
PRPF40B-212ENST00000551111 MB21D1Q8N884 522 aa13.88□□□□□ -0.19
PRPF40B-212ENST00000551111 OTUD7AQ8TE49 926 aaPredicted RBP13.88□□□□□ -0.19
PRPF40B-212ENST00000551111 MAML3Q96JK9 1138 aa13.88□□□□□ -0.19
PRPF40B-212ENST00000551111 SEC62Q99442 399 aaKnown RBP13.88□□□□□ -0.19
PRPF40B-212ENST00000551111 DCTPP1Q9H773 170 aa13.88□□□□□ -0.19
PRPF40B-212ENST00000551111 KANSL2Q9H9L4 492 aa13.88□□□□□ -0.19
PRPF40B-212ENST00000551111 EYSQ5T1H1 3165 aa13.87□□□□□ -0.19
PRPF40B-212ENST00000551111 MINDY4BA8MYZ0 360 aa13.87□□□□□ -0.19
PRPF40B-212ENST00000551111 DNM1LO00429 736 aa13.87□□□□□ -0.19
PRPF40B-212ENST00000551111 VWA5AO00534 786 aa13.87□□□□□ -0.19
PRPF40B-212ENST00000551111 RAD21O60216 631 aa13.87□□□□□ -0.19
PRPF40B-212ENST00000551111 MYCNP04198 464 aaPredicted RBP13.87□□□□□ -0.19
PRPF40B-212ENST00000551111 FAM47AQ5JRC9 791 aa13.87□□□□□ -0.19
PRPF40B-212ENST00000551111 DEFB123Q8N688 67 aa13.87□□□□□ -0.19
PRPF40B-212ENST00000551111 KBTBD3Q8NAB2 608 aa13.87□□□□□ -0.19
PRPF40B-212ENST00000551111 FERMT2Q96AC1 680 aa13.87□□□□□ -0.19
PRPF40B-212ENST00000551111 LENG1Q96BZ8 264 aaPredicted RBP13.87□□□□□ -0.19
PRPF40B-212ENST00000551111 MROH8Q9H579 483 aa13.87□□□□□ -0.19
PRPF40B-212ENST00000551111 ZNF214Q9UL59 606 aaPredicted RBP13.87□□□□□ -0.19
PRPF40B-212ENST00000551111 PPP1R9AQ9ULJ8 1098 aa13.87□□□□□ -0.19
PRPF40B-212ENST00000551111 RIPK3Q9Y572 518 aa13.87□□□□□ -0.19
PRPF40B-212ENST00000551111 PCDHB15Q9Y5E8 787 aa13.87□□□□□ -0.19
PRPF40B-212ENST00000551111 UNC80Q8N2C7 3258 aa13.86□□□□□ -0.19
PRPF40B-212ENST00000551111 SEPT4O43236 478 aa13.86□□□□□ -0.19
PRPF40B-212ENST00000551111 PRDM1O75626 825 aa13.86□□□□□ -0.19
PRPF40B-212ENST00000551111 FCER1AP12319 257 aa13.86□□□□□ -0.19
PRPF40B-212ENST00000551111 LRRC41Q15345 812 aa13.86□□□□□ -0.19
PRPF40B-212ENST00000551111 SBK1Q52WX2 424 aa13.86□□□□□ -0.19
PRPF40B-212ENST00000551111 SLC39A5Q6ZMH5 540 aa13.86□□□□□ -0.19
PRPF40B-212ENST00000551111 SH3RF1Q7Z6J0 888 aa13.86□□□□□ -0.19
PRPF40B-212ENST00000551111 RIOX2Q8IUF8 465 aa13.86□□□□□ -0.19
PRPF40B-212ENST00000551111 SH2D4AQ9H788 454 aa13.86□□□□□ -0.19
PRPF40B-212ENST00000551111 MTMR10Q9NXD2 777 aa13.86□□□□□ -0.19
PRPF40B-212ENST00000551111 ATP11BQ9Y2G3 1177 aa13.86□□□□□ -0.19
PRPF40B-212ENST00000551111 IGKV6D-41A0A0C4DH26 115 aa13.85□□□□□ -0.19
PRPF40B-212ENST00000551111 RNF113AO15541 343 aaKnown RBP13.85□□□□□ -0.19
PRPF40B-212ENST00000551111 GPAA1O43292 621 aa13.85□□□□□ -0.19
PRPF40B-212ENST00000551111 MSCO60682 206 aa13.85□□□□□ -0.19
PRPF40B-212ENST00000551111 STAT3P40763 770 aa13.85□□□□□ -0.19
PRPF40B-212ENST00000551111 ADCYAP1R1P41586 468 aa13.85□□□□□ -0.19
PRPF40B-212ENST00000551111 IRX5P78411 483 aaPredicted RBP13.85□□□□□ -0.19
PRPF40B-212ENST00000551111 ZNF792Q3KQV3 632 aa13.85□□□□□ -0.19
PRPF40B-212ENST00000551111 ZSCAN25Q6NSZ9 544 aa13.85□□□□□ -0.19
PRPF40B-212ENST00000551111 ABRAQ8N0Z2 381 aa13.85□□□□□ -0.19
PRPF40B-212ENST00000551111 MMP19Q99542 508 aa13.85□□□□□ -0.19
PRPF40B-212ENST00000551111 CHMP4BQ9H444 224 aaKnown RBP13.85□□□□□ -0.19
PRPF40B-212ENST00000551111 ARPP21Q9UBL0 812 aaPredicted RBP13.85□□□□□ -0.19
PRPF40B-212ENST00000551111 F5H6K3 240 aa13.84□□□□□ -0.19
PRPF40B-212ENST00000551111 SLC25A27O95847 323 aa13.84□□□□□ -0.19
PRPF40B-212ENST00000551111 NDUFB10O96000 172 aa13.84□□□□□ -0.19
PRPF40B-212ENST00000551111 PGK1P00558 417 aa13.84□□□□□ -0.19
PRPF40B-212ENST00000551111 KLRC3Q07444 240 aa13.84□□□□□ -0.19
PRPF40B-212ENST00000551111 TRIM60Q495X7 471 aa13.84□□□□□ -0.19
PRPF40B-212ENST00000551111 AMOTL1Q8IY63 956 aa13.84□□□□□ -0.19
PRPF40B-212ENST00000551111 ARRDC4Q8NCT1 418 aa13.84□□□□□ -0.19
PRPF40B-212ENST00000551111 SLC17A8Q8NDX2 589 aa13.84□□□□□ -0.19
PRPF40B-212ENST00000551111 APPBP2Q92624 585 aa13.84□□□□□ -0.19
PRPF40B-212ENST00000551111 CHMP4CQ96CF2 233 aa13.84□□□□□ -0.19
PRPF40B-212ENST00000551111 DDRGK1Q96HY6 314 aa13.84□□□□□ -0.19
PRPF40B-212ENST00000551111 GOPCQ9HD26 462 aa13.84□□□□□ -0.19
PRPF40B-212ENST00000551111 CLIP2Q9UDT6 1046 aa13.84□□□□□ -0.19
PRPF40B-212ENST00000551111 CDH23Q9H251 3354 aa13.84□□□□□ -0.19
PRPF40B-212ENST00000551111 LCTP09848 1927 aa13.84□□□□□ -0.19
PRPF40B-212ENST00000551111 ROBO3Q96MS0 1386 aa13.83□□□□□ -0.19
PRPF40B-212ENST00000551111 TRIM43BA6NCK2 446 aa13.83□□□□□ -0.2
PRPF40B-212ENST00000551111 ZNF865P0CJ78 1059 aaPredicted RBP13.83□□□□□ -0.2
PRPF40B-212ENST00000551111 ITGB8P26012 769 aa13.83□□□□□ -0.2
PRPF40B-212ENST00000551111 SLC4A3P48751 1232 aa13.83□□□□□ -0.2
PRPF40B-212ENST00000551111 SNX17Q15036 470 aa13.83□□□□□ -0.2
PRPF40B-212ENST00000551111 C9orf50Q5SZB4 431 aa13.83□□□□□ -0.2
PRPF40B-212ENST00000551111 PI4K2BQ8TCG2 481 aa13.83□□□□□ -0.2
PRPF40B-212ENST00000551111 TRIM43Q96BQ3 446 aaPredicted RBP13.83□□□□□ -0.2
PRPF40B-212ENST00000551111 TINF2Q9BSI4 451 aa13.83□□□□□ -0.2
PRPF40B-212ENST00000551111 MKNK2Q9HBH9 465 aa13.83□□□□□ -0.2
PRPF40B-212ENST00000551111 INCENPQ9NQS7 918 aa13.83□□□□□ -0.2
PRPF40B-212ENST00000551111 NYAP2Q9P242 653 aa13.83□□□□□ -0.2
PRPF40B-212ENST00000551111 MYO9BQ13459 2157 aa13.83□□□□□ -0.2
PRPF40B-212ENST00000551111 PRUNE2Q8WUY3 3088 aa13.83□□□□□ -0.2
PRPF40B-212ENST00000551111 KBTBD13C9JR72 458 aa13.82□□□□□ -0.2
PRPF40B-212ENST00000551111 FOXP2O15409 715 aa13.82□□□□□ -0.2
PRPF40B-212ENST00000551111 SNAI1O95863 264 aaPredicted RBP13.82□□□□□ -0.2
PRPF40B-212ENST00000551111 SHHQ15465 462 aa13.82□□□□□ -0.2
PRPF40B-212ENST00000551111 GPR153Q6NV75 609 aa13.82□□□□□ -0.2
PRPF40B-212ENST00000551111 GIMAP6Q6P9H5 292 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms