RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 SEPT4O43236 478 aa19.49■□□□□ 0.71
DDX55-212ENST00000544738 MBD4O95243 580 aa19.49■□□□□ 0.71
DDX55-212ENST00000544738 RAG1P15918 1043 aa19.49■□□□□ 0.71
DDX55-212ENST00000544738 LRRC41Q15345 812 aa19.49■□□□□ 0.71
DDX55-212ENST00000544738 AMOTL1Q8IY63 956 aa19.49■□□□□ 0.71
DDX55-212ENST00000544738 ATXN2LQ8WWM7 1075 aaKnown RBP19.49■□□□□ 0.71
DDX55-212ENST00000544738 SWAP70Q9UH65 585 aa19.49■□□□□ 0.71
DDX55-212ENST00000544738 BDP1A6H8Y1 2624 aa19.48■□□□□ 0.71
DDX55-212ENST00000544738 ADAMTS19Q8TE59 1207 aa19.48■□□□□ 0.71
DDX55-212ENST00000544738 TIFAQ96CG3 184 aa19.48■□□□□ 0.71
DDX55-212ENST00000544738 ASB2Q96Q27 587 aa19.48■□□□□ 0.71
DDX55-212ENST00000544738 NAV1Q8NEY1 1877 aa19.48■□□□□ 0.71
DDX55-212ENST00000544738 CLTBP09497 229 aa19.47■□□□□ 0.71
DDX55-212ENST00000544738 ADORA2AP29274 412 aa19.47■□□□□ 0.71
DDX55-212ENST00000544738 OLFML2BQ68BL8 750 aa19.47■□□□□ 0.71
DDX55-212ENST00000544738 GAS2L1Q99501 681 aaPredicted RBP19.47■□□□□ 0.71
DDX55-212ENST00000544738 MYO9BQ13459 2157 aa19.47■□□□□ 0.71
DDX55-212ENST00000544738 RLFQ13129 1914 aa19.47■□□□□ 0.71
DDX55-212ENST00000544738 MPHOSPH10O00566 681 aaKnown RBP19.46■□□□□ 0.71
DDX55-212ENST00000544738 PRKAB2O43741 272 aa19.46■□□□□ 0.71
DDX55-212ENST00000544738 PQBP1O60828 265 aaKnown RBP19.46■□□□□ 0.71
DDX55-212ENST00000544738 IGHA2P01877 340 aa19.46■□□□□ 0.71
DDX55-212ENST00000544738 VCAM1P19320 739 aa19.46■□□□□ 0.71
DDX55-212ENST00000544738 FPGSQ05932 587 aa19.46■□□□□ 0.71
DDX55-212ENST00000544738 SEPT2Q15019 361 aa19.46■□□□□ 0.71
DDX55-212ENST00000544738 CCDC85BQ15834 202 aaPredicted RBP19.46■□□□□ 0.71
DDX55-212ENST00000544738 C1orf53Q5VUE5 145 aa19.46■□□□□ 0.71
DDX55-212ENST00000544738 ACER1Q8TDN7 264 aa19.46■□□□□ 0.71
DDX55-212ENST00000544738 UHRF1Q96T88 793 aaPredicted RBP19.46■□□□□ 0.71
DDX55-212ENST00000544738 TMEM39AQ9NV64 488 aa19.46■□□□□ 0.71
DDX55-212ENST00000544738 GUCY1A2P33402 732 aa19.45■□□□□ 0.7
DDX55-212ENST00000544738 SLFNL1Q499Z3 407 aa19.45■□□□□ 0.7
DDX55-212ENST00000544738 FAM47AQ5JRC9 791 aa19.45■□□□□ 0.7
DDX55-212ENST00000544738 TMEM179Q6ZVK1 233 aa19.45■□□□□ 0.7
DDX55-212ENST00000544738 IL27Q8NEV9 243 aa19.45■□□□□ 0.7
DDX55-212ENST00000544738 CCDC17Q96LX7 622 aa19.45■□□□□ 0.7
DDX55-212ENST00000544738 RPAP3Q9H6T3 665 aaPredicted RBP19.45■□□□□ 0.7
DDX55-212ENST00000544738 THEGQ9P2T0 379 aa19.45■□□□□ 0.7
DDX55-212ENST00000544738 SLC4A4Q9Y6R1 1079 aa19.45■□□□□ 0.7
DDX55-212ENST00000544738 SPDYE16A6NNV3 312 aaPredicted RBP19.44■□□□□ 0.7
DDX55-212ENST00000544738 KIAA0355O15063 1070 aa19.44■□□□□ 0.7
DDX55-212ENST00000544738 STRNO43815 780 aa19.44■□□□□ 0.7
DDX55-212ENST00000544738 COBLO75128 1261 aa19.44■□□□□ 0.7
DDX55-212ENST00000544738 CYP2D6P10635 497 aa19.44■□□□□ 0.7
DDX55-212ENST00000544738 RRP1P56182 461 aaKnown RBP19.44■□□□□ 0.7
DDX55-212ENST00000544738 MRPS5P82675 430 aaKnown RBP19.44■□□□□ 0.7
DDX55-212ENST00000544738 C12orf60Q5U649 245 aa19.44■□□□□ 0.7
DDX55-212ENST00000544738 LBX2Q6XYB7 198 aa19.44■□□□□ 0.7
DDX55-212ENST00000544738 CCDC129Q6ZRS4 1044 aa19.44■□□□□ 0.7
DDX55-212ENST00000544738 KBTBD3Q8NAB2 608 aa19.44■□□□□ 0.7
DDX55-212ENST00000544738 MOV10L1Q9BXT6 1211 aaKnown RBP19.44■□□□□ 0.7
DDX55-212ENST00000544738 PUS7LQ9H0K6 701 aaKnown RBP19.44■□□□□ 0.7
DDX55-212ENST00000544738 PRDM12Q9H4Q4 367 aa19.44■□□□□ 0.7
DDX55-212ENST00000544738 USP17L12C9JPN9 530 aa19.43■□□□□ 0.7
DDX55-212ENST00000544738 USP17L21D6R901 530 aa19.43■□□□□ 0.7
DDX55-212ENST00000544738 EVX2Q03828 476 aa19.43■□□□□ 0.7
DDX55-212ENST00000544738 LRRFIP1Q32MZ4 808 aaKnown RBP19.43■□□□□ 0.7
DDX55-212ENST00000544738 DYNLL2Q96FJ2 89 aa19.43■□□□□ 0.7
DDX55-212ENST00000544738 SLC5A4Q9NY91 659 aa19.43■□□□□ 0.7
DDX55-212ENST00000544738 PHF24Q9UPV7 400 aa19.43■□□□□ 0.7
DDX55-212ENST00000544738 PCDHB15Q9Y5E8 787 aa19.43■□□□□ 0.7
DDX55-212ENST00000544738 MYH7P12883 1935 aa19.43■□□□□ 0.7
DDX55-212ENST00000544738 ERC2O15083 957 aa19.42■□□□□ 0.7
DDX55-212ENST00000544738 ZFYP08048 801 aaPredicted RBP19.42■□□□□ 0.7
DDX55-212ENST00000544738 ERCC3P19447 782 aa19.42■□□□□ 0.7
DDX55-212ENST00000544738 SLC44A5Q8NCS7 719 aa19.42■□□□□ 0.7
DDX55-212ENST00000544738 SH2D4AQ9H788 454 aa19.42■□□□□ 0.7
DDX55-212ENST00000544738 XPNPEP3Q9NQH7 507 aa19.42■□□□□ 0.7
DDX55-212ENST00000544738 TTC41PQ6P2S7 1318 aa19.42■□□□□ 0.7
DDX55-212ENST00000544738 GRXCR1A8MXD5 290 aa19.41■□□□□ 0.7
DDX55-212ENST00000544738 PGK1P00558 417 aa19.41■□□□□ 0.7
DDX55-212ENST00000544738 CHGBP05060 677 aa19.41■□□□□ 0.7
DDX55-212ENST00000544738 RARBP10826 455 aa19.41■□□□□ 0.7
DDX55-212ENST00000544738 IGFBP4P22692 258 aa19.41■□□□□ 0.7
DDX55-212ENST00000544738 PBX2P40425 430 aa19.41■□□□□ 0.7
DDX55-212ENST00000544738 CDK8P49336 464 aa19.41■□□□□ 0.7
DDX55-212ENST00000544738 AKNAD1Q5T1N1 836 aa19.41■□□□□ 0.7
DDX55-212ENST00000544738 CTR9Q6PD62 1173 aa19.41■□□□□ 0.7
DDX55-212ENST00000544738 C16orf86Q6ZW13 317 aa19.41■□□□□ 0.7
DDX55-212ENST00000544738 RNF180Q86T96 592 aa19.41■□□□□ 0.7
DDX55-212ENST00000544738 APPBP2Q92624 585 aa19.41■□□□□ 0.7
DDX55-212ENST00000544738 STRBPQ96SI9 672 aaKnown RBP19.41■□□□□ 0.7
DDX55-212ENST00000544738 ARHGEF10LQ9HCE6 1279 aa19.41■□□□□ 0.7
DDX55-212ENST00000544738 HOXC10Q9NYD6 342 aa19.41■□□□□ 0.7
DDX55-212ENST00000544738 ARPP21Q9UBL0 812 aaPredicted RBP19.41■□□□□ 0.7
DDX55-212ENST00000544738 A0A1W2PRG0 241 aa19.4■□□□□ 0.7
DDX55-212ENST00000544738 RNF113AO15541 343 aaKnown RBP19.4■□□□□ 0.7
DDX55-212ENST00000544738 PLS1Q14651 629 aa19.4■□□□□ 0.7
DDX55-212ENST00000544738 COG2Q14746 738 aa19.4■□□□□ 0.7
DDX55-212ENST00000544738 GIMAP6Q6P9H5 292 aa19.4■□□□□ 0.7
DDX55-212ENST00000544738 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.4■□□□□ 0.77e-8■■■□□ 15.9
DDX55-212ENST00000544738 SPATC1LQ9H0A9 340 aa19.4■□□□□ 0.7
DDX55-212ENST00000544738 ZBTB47Q9UFB7 747 aaPredicted RBP19.4■□□□□ 0.7
DDX55-212ENST00000544738 CYP2D7A0A087X1C5 515 aa19.39■□□□□ 0.69
DDX55-212ENST00000544738 AKR1B1P15121 316 aa19.39■□□□□ 0.69
DDX55-212ENST00000544738 GNAT2P19087 354 aa19.39■□□□□ 0.69
DDX55-212ENST00000544738 HOXD11P31277 338 aaPredicted RBP19.39■□□□□ 0.69
DDX55-212ENST00000544738 ICA1Q05084 483 aa19.39■□□□□ 0.69
DDX55-212ENST00000544738 FAAP100Q0VG06 881 aa19.39■□□□□ 0.69
DDX55-212ENST00000544738 NCAPG2Q86XI2 1143 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms