RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 CCT2P78371 535 aaKnown RBP11.74□□□□□ -0.53
MDH1-216ENST00000544381 SCRN1Q12765 414 aa11.74□□□□□ -0.53
MDH1-216ENST00000544381 SYNE3Q6ZMZ3 975 aa11.74□□□□□ -0.53
MDH1-216ENST00000544381 KRT26Q7Z3Y9 468 aa11.74□□□□□ -0.53
MDH1-216ENST00000544381 TMTC2Q8N394 836 aa11.74□□□□□ -0.53
MDH1-216ENST00000544381 IGDCC4Q8TDY8 1250 aa11.74□□□□□ -0.53
MDH1-216ENST00000544381 ANP32EQ9BTT0 268 aa11.74□□□□□ -0.53
MDH1-216ENST00000544381 USP40Q9NVE5 1235 aa11.74□□□□□ -0.53
MDH1-216ENST00000544381 SAP30BPQ9UHR5 308 aaKnown RBP11.74□□□□□ -0.53
MDH1-216ENST00000544381 CDK5RAP2Q96SN8 1893 aa11.74□□□□□ -0.53
MDH1-216ENST00000544381 PAPPA2Q9BXP8 1791 aa11.74□□□□□ -0.53
MDH1-216ENST00000544381 MYO3BQ8WXR4 1341 aa11.73□□□□□ -0.53
MDH1-216ENST00000544381 ORC4O43929 436 aa11.73□□□□□ -0.53
MDH1-216ENST00000544381 PDCP20941 246 aa11.73□□□□□ -0.53
MDH1-216ENST00000544381 LIFRP42702 1097 aa11.73□□□□□ -0.53
MDH1-216ENST00000544381 NT5C2P49902 561 aa11.73□□□□□ -0.53
MDH1-216ENST00000544381 PKP1Q13835 747 aa11.73□□□□□ -0.53
MDH1-216ENST00000544381 WTAPQ15007 396 aa11.73□□□□□ -0.53
MDH1-216ENST00000544381 SLC4A8Q2Y0W8 1093 aa11.73□□□□□ -0.53
MDH1-216ENST00000544381 IQCA1Q86XH1 822 aa11.73□□□□□ -0.53
MDH1-216ENST00000544381 ZDHHC15Q96MV8 337 aa11.73□□□□□ -0.53
MDH1-216ENST00000544381 CSRNP1Q96S65 589 aa11.73□□□□□ -0.53
MDH1-216ENST00000544381 ZNF287Q9HBT7 754 aa11.73□□□□□ -0.53
MDH1-216ENST00000544381 BRPF3Q9ULD4 1205 aa11.73□□□□□ -0.53
MDH1-216ENST00000544381 KIF3AQ9Y496 699 aa11.73□□□□□ -0.53
MDH1-216ENST00000544381 FLT1P17948 1338 aa11.72□□□□□ -0.53
MDH1-216ENST00000544381 MYH1P12882 1939 aa11.72□□□□□ -0.53
MDH1-216ENST00000544381 H7C1D1 291 aa11.72□□□□□ -0.53
MDH1-216ENST00000544381 SMIM22K7EJ46 135 aa11.72□□□□□ -0.53
MDH1-216ENST00000544381 STX6O43752 255 aa11.72□□□□□ -0.53
MDH1-216ENST00000544381 PRDM1O75626 825 aa11.72□□□□□ -0.53
MDH1-216ENST00000544381 TRPA1O75762 1119 aa11.72□□□□□ -0.53
MDH1-216ENST00000544381 BRD1O95696 1058 aa11.72□□□□□ -0.53
MDH1-216ENST00000544381 HMGN5P82970 282 aaKnown RBP11.72□□□□□ -0.53
MDH1-216ENST00000544381 PICALMQ13492 652 aa11.72□□□□□ -0.53
MDH1-216ENST00000544381 FOXD4L5Q5VV16 416 aaPredicted RBP11.72□□□□□ -0.53
MDH1-216ENST00000544381 LARP1BQ659C4 914 aaKnown RBP11.72□□□□□ -0.53
MDH1-216ENST00000544381 RSBN1LQ6PCB5 846 aaPredicted RBP11.72□□□□□ -0.53
MDH1-216ENST00000544381 SGMS1Q86VZ5 419 aa11.72□□□□□ -0.53
MDH1-216ENST00000544381 FAM184AQ8NB25 1140 aa11.72□□□□□ -0.53
MDH1-216ENST00000544381 NKX2-3Q8TAU0 364 aa11.72□□□□□ -0.53
MDH1-216ENST00000544381 FOXD4L4Q8WXT5 416 aaPredicted RBP11.72□□□□□ -0.53
MDH1-216ENST00000544381 ZKSCAN3Q9BRR0 538 aa11.72□□□□□ -0.53
MDH1-216ENST00000544381 LY9Q9HBG7 655 aa11.72□□□□□ -0.53
MDH1-216ENST00000544381 MKNK2Q9HBH9 465 aa11.72□□□□□ -0.53
MDH1-216ENST00000544381 NCOA5Q9HCD5 579 aaKnown RBP11.72□□□□□ -0.53
MDH1-216ENST00000544381 SERPINA10Q9UK55 444 aa11.72□□□□□ -0.53
MDH1-216ENST00000544381 HDAC9Q9UKV0 1011 aa11.72□□□□□ -0.53
MDH1-216ENST00000544381 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.72□□□□□ -0.53
MDH1-216ENST00000544381 SLC12A7Q9Y666 1083 aa11.72□□□□□ -0.53
MDH1-216ENST00000544381 FOCADQ5VW36 1801 aa11.71□□□□□ -0.53
MDH1-216ENST00000544381 GOLGA6L22H0YM25 854 aa11.71□□□□□ -0.53
MDH1-216ENST00000544381 CPLX1O14810 134 aa11.71□□□□□ -0.53
MDH1-216ENST00000544381 ZBTB43O43298 467 aa11.71□□□□□ -0.53
MDH1-216ENST00000544381 ACTN4O43707 911 aaKnown RBP11.71□□□□□ -0.53
MDH1-216ENST00000544381 VIL1P09327 827 aaKnown RBP11.71□□□□□ -0.53
MDH1-216ENST00000544381 SYT1P21579 422 aa11.71□□□□□ -0.53
MDH1-216ENST00000544381 MCM4P33991 863 aa11.71□□□□□ -0.53
MDH1-216ENST00000544381 METAP2P50579 478 aaKnown RBP eCLIP11.71□□□□□ -0.53
MDH1-216ENST00000544381 APOBEC3HQ6NTF7 200 aaKnown RBP11.71□□□□□ -0.53
MDH1-216ENST00000544381 CDC42EP5Q6NZY7 148 aa11.71□□□□□ -0.53
MDH1-216ENST00000544381 CPLX2Q6PUV4 134 aaKnown RBP11.71□□□□□ -0.53
MDH1-216ENST00000544381 APOA5Q6Q788 366 aa11.71□□□□□ -0.53
MDH1-216ENST00000544381 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.71□□□□□ -0.53
MDH1-216ENST00000544381 TTC6Q86TZ1 520 aa11.71□□□□□ -0.53
MDH1-216ENST00000544381 RASAL3Q86YV0 1011 aa11.71□□□□□ -0.53
MDH1-216ENST00000544381 ZNF444Q8N0Y2 327 aaPredicted RBP11.71□□□□□ -0.53
MDH1-216ENST00000544381 NLRP7Q8WX94 980 aa11.71□□□□□ -0.53
MDH1-216ENST00000544381 DYNLL2Q96FJ2 89 aa11.71□□□□□ -0.53
MDH1-216ENST00000544381 ZSCAN10Q96SZ4 725 aaPredicted RBP11.71□□□□□ -0.53
MDH1-216ENST00000544381 GGA3Q9NZ52 723 aa11.71□□□□□ -0.53
MDH1-216ENST00000544381 ZDHHC9Q9Y397 364 aa11.71□□□□□ -0.53
MDH1-216ENST00000544381 ROBO3Q96MS0 1386 aa11.71□□□□□ -0.54
MDH1-216ENST00000544381 TNKSO95271 1327 aa11.7□□□□□ -0.54
MDH1-216ENST00000544381 PTPDC1A2A3K4 754 aa11.7□□□□□ -0.54
MDH1-216ENST00000544381 TSPY2A6NKD2 308 aa11.7□□□□□ -0.54
MDH1-216ENST00000544381 GOLGA8AA7E2F4 631 aa11.7□□□□□ -0.54
MDH1-216ENST00000544381 DDX11L8A8MPP1 907 aa11.7□□□□□ -0.54
MDH1-216ENST00000544381 JAK2O60674 1132 aa11.7□□□□□ -0.54
MDH1-216ENST00000544381 WDHD1O75717 1129 aaPredicted RBP11.7□□□□□ -0.54
MDH1-216ENST00000544381 ZSCAN22P10073 491 aaPredicted RBP11.7□□□□□ -0.54
MDH1-216ENST00000544381 PTMSP20962 102 aa11.7□□□□□ -0.54
MDH1-216ENST00000544381 PLCD1P51178 756 aa11.7□□□□□ -0.54
MDH1-216ENST00000544381 ZNF157P51786 506 aaPredicted RBP11.7□□□□□ -0.54
MDH1-216ENST00000544381 KIF4BQ2VIQ3 1234 aa11.7□□□□□ -0.54
MDH1-216ENST00000544381 CCDC178Q5BJE1 867 aa11.7□□□□□ -0.54
MDH1-216ENST00000544381 CLEC17AQ6ZS10 378 aa11.7□□□□□ -0.54
MDH1-216ENST00000544381 RAB11FIP4Q86YS3 637 aa11.7□□□□□ -0.54
MDH1-216ENST00000544381 OGFOD1Q8N543 542 aa11.7□□□□□ -0.54
MDH1-216ENST00000544381 NSUN7Q8NE18 718 aaKnown RBP11.7□□□□□ -0.54
MDH1-216ENST00000544381 DDX11Q96FC9 970 aa11.7□□□□□ -0.54
MDH1-216ENST00000544381 CDCA5Q96FF9 252 aa11.7□□□□□ -0.54
MDH1-216ENST00000544381 PHOX2BQ99453 314 aa11.7□□□□□ -0.54
MDH1-216ENST00000544381 SENP2Q9HC62 589 aa11.7□□□□□ -0.54
MDH1-216ENST00000544381 ECM29Q5VYK3 1845 aa11.7□□□□□ -0.54
MDH1-216ENST00000544381 VPS37CA5D8V6 355 aaPredicted RBP11.69□□□□□ -0.54
MDH1-216ENST00000544381 DTNBO60941 627 aa11.69□□□□□ -0.54
MDH1-216ENST00000544381 CDKL5O76039 1030 aa11.69□□□□□ -0.54
MDH1-216ENST00000544381 BAG4O95429 457 aaKnown RBP11.69□□□□□ -0.54
MDH1-216ENST00000544381 RPS12P25398 132 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms