RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 SYNPO2Q9UMS6 1093 aa10.73□□□□□ -0.69
GNE-206ENST00000543356 SBF1O95248 1867 aa10.73□□□□□ -0.69
GNE-206ENST00000543356 A0A1W2PQ27 194 aa10.73□□□□□ -0.69
GNE-206ENST00000543356 A0A1W2PQ64 194 aa10.73□□□□□ -0.69
GNE-206ENST00000543356 A0A1W2PQD8 194 aa10.73□□□□□ -0.69
GNE-206ENST00000543356 CALML3P27482 149 aa10.73□□□□□ -0.69
GNE-206ENST00000543356 TNNI2P48788 182 aa10.73□□□□□ -0.69
GNE-206ENST00000543356 SLC39A14Q15043 492 aa10.73□□□□□ -0.69
GNE-206ENST00000543356 USP17L2Q6R6M4 530 aa10.73□□□□□ -0.69
GNE-206ENST00000543356 RASGRP2Q7LDG7 609 aa10.73□□□□□ -0.69
GNE-206ENST00000543356 BICD2Q8TD16 824 aa10.73□□□□□ -0.69
GNE-206ENST00000543356 TNFRSF25Q93038 417 aa10.73□□□□□ -0.69
GNE-206ENST00000543356 FHDC1Q9C0D6 1143 aaPredicted RBP10.73□□□□□ -0.69
GNE-206ENST00000543356 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.73□□□□□ -0.69
GNE-206ENST00000543356 PGAP2Q9UHJ9 254 aa10.73□□□□□ -0.69
GNE-206ENST00000543356 ZNF541Q9H0D2 1346 aa10.73□□□□□ -0.69
GNE-206ENST00000543356 SHTN1A0MZ66 631 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 SPTLC2O15270 562 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 PPP6R2O75170 966 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 GOLGA8HP0CJ92 632 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 LIG1P18858 919 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 ME1P48163 572 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 ZNF543Q08ER8 600 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 NR5A1Q13285 461 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 PTPAQ15257 358 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 NBPF9Q3BBW0 867 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 RBM26Q5T8P6 1007 aaKnown RBP10.72□□□□□ -0.69
GNE-206ENST00000543356 LRSAM1Q6UWE0 723 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 DHX37Q8IY37 1157 aaKnown RBP10.72□□□□□ -0.69
GNE-206ENST00000543356 CCDC148Q8NFR7 591 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 OXER1Q8TDS5 423 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 PDCL3Q9H2J4 239 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 RIOX1Q9H6W3 641 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 DDX19AQ9NUU7 478 aaKnown RBP10.72□□□□□ -0.69
GNE-206ENST00000543356 MTMR7Q9Y216 660 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 MORC2Q9Y6X9 1032 aaPredicted RBP10.72□□□□□ -0.69
GNE-206ENST00000543356 SYCE3A1L190 88 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 hCG_1984214I3L0E3 225 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 EEF2P13639 858 aaKnown RBP10.72□□□□□ -0.69
GNE-206ENST00000543356 LMNB1P20700 586 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 ICA1Q05084 483 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 SF3A1Q15459 793 aaKnown RBP10.72□□□□□ -0.69
GNE-206ENST00000543356 GPATCH4Q5T3I0 446 aaKnown RBP10.72□□□□□ -0.69
GNE-206ENST00000543356 ADALQ6DHV7 355 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 GALNT17Q6IS24 598 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 MICALL2Q8IY33 904 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 ZNF713Q8N859 430 aaPredicted RBP10.72□□□□□ -0.69
GNE-206ENST00000543356 DAGLBQ8NCG7 672 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 DCAF4Q8WV16 495 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 RRP36Q96EU6 259 aaKnown RBP10.72□□□□□ -0.69
GNE-206ENST00000543356 BARHL2Q9NY43 387 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 PCDHA7Q9UN72 937 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 STXBP3O00186 592 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 GDF11O95390 407 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 TOB1P50616 345 aaPredicted RBP10.72□□□□□ -0.69
GNE-206ENST00000543356 NLRP5P59047 1200 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 MAP3K10Q02779 954 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 TNFAIP1Q13829 316 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 SEPT2Q15019 361 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 WWC2Q6AWC2 1192 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 GAS2L3Q86XJ1 694 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 JMYQ8N9B5 988 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 GMCL1P1Q8NEA9 526 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 CABP5Q9NP86 173 aa10.72□□□□□ -0.69
GNE-206ENST00000543356 FRMPD2Q68DX3 1309 aaPredicted RBP10.71□□□□□ -0.69
GNE-206ENST00000543356 SHROOM1Q2M3G4 852 aaPredicted RBP10.71□□□□□ -0.69
GNE-206ENST00000543356 CCAR1Q8IX12 1150 aaKnown RBP10.71□□□□□ -0.69
GNE-206ENST00000543356 CCDC12Q8WUD4 166 aaPredicted RBP10.71□□□□□ -0.69
GNE-206ENST00000543356 GPKOWQ92917 476 aaPredicted RBP eCLIP10.71□□□□□ -0.69
GNE-206ENST00000543356 TMEM39BQ9GZU3 492 aa10.71□□□□□ -0.69
GNE-206ENST00000543356 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.71□□□□□ -0.69
GNE-206ENST00000543356 SEC63Q9UGP8 760 aaKnown RBP10.71□□□□□ -0.69
GNE-206ENST00000543356 CNOT7Q9UIV1 285 aaKnown RBP10.71□□□□□ -0.69
GNE-206ENST00000543356 PCDHA4Q9UN74 947 aa10.71□□□□□ -0.69
GNE-206ENST00000543356 GJA3Q9Y6H8 435 aa10.71□□□□□ -0.69
GNE-206ENST00000543356 ATAD5Q96QE3 1844 aa10.71□□□□□ -0.69
GNE-206ENST00000543356 GH2P01242 217 aa10.71□□□□□ -0.7
GNE-206ENST00000543356 VEGFAP15692 232 aaPredicted RBP10.71□□□□□ -0.7
GNE-206ENST00000543356 MRE11P49959 708 aa10.71□□□□□ -0.7
GNE-206ENST00000543356 ATP2B2Q01814 1243 aa10.71□□□□□ -0.7
GNE-206ENST00000543356 RRP1BQ14684 758 aaKnown RBP10.71□□□□□ -0.7
GNE-206ENST00000543356 ARHGAP27Q6ZUM4 889 aa10.71□□□□□ -0.7
GNE-206ENST00000543356 SIAH1Q8IUQ4 282 aa10.71□□□□□ -0.7
GNE-206ENST00000543356 PIBF1Q8WXW3 757 aa10.71□□□□□ -0.7
GNE-206ENST00000543356 MRPS27Q92552 414 aaKnown RBP10.71□□□□□ -0.7
GNE-206ENST00000543356 NOL7Q9UMY1 257 aaKnown RBP10.71□□□□□ -0.7
GNE-206ENST00000543356 CEP131Q9UPN4 1083 aa10.71□□□□□ -0.7
GNE-206ENST00000543356 CCDC73Q6ZRK6 1079 aa10.7□□□□□ -0.7
GNE-206ENST00000543356 HEATR3Q7Z4Q2 680 aa10.7□□□□□ -0.7
GNE-206ENST00000543356 BLIDQ8IZY5 108 aa10.7□□□□□ -0.7
GNE-206ENST00000543356 GPC2Q8N158 579 aa10.7□□□□□ -0.7
GNE-206ENST00000543356 GMCL1Q96IK5 515 aa10.7□□□□□ -0.7
GNE-206ENST00000543356 NUP62CLQ9H1M0 184 aa10.7□□□□□ -0.7
GNE-206ENST00000543356 CLSTN2Q9H4D0 955 aa10.7□□□□□ -0.7
GNE-206ENST00000543356 GRPEL1Q9HAV7 217 aa10.7□□□□□ -0.7
GNE-206ENST00000543356 DACT1Q9NYF0 836 aa10.7□□□□□ -0.7
GNE-206ENST00000543356 M0R2N6 131 aa10.7□□□□□ -0.7
GNE-206ENST00000543356 NR1I2O75469 434 aa10.7□□□□□ -0.7
GNE-206ENST00000543356 EGFRP00533 1210 aa10.7□□□□□ -0.7
GNE-206ENST00000543356 TRAPPC10P48553 1259 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms