RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 PLPP7Q8NBV4 271 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 MTMR14Q8NCE2 650 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 NFATC2IPQ8NCF5 419 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 PIK3R5Q8WYR1 880 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 LENG1Q96BZ8 264 aaPredicted RBP3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 PNMA5Q96PV4 448 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 SETDB2Q96T68 719 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 FSD1Q9BTV5 496 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 GOLGA2P5Q9HBQ8 144 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 PAK6Q9NQU5 681 aaPredicted RBP3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 MYO9AB2RTY4 2548 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 MYPNQ86TC9 1320 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 ANKRD26Q9UPS8 1709 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 MYH14Q7Z406 1995 aaKnown RBP3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 SPTAN1Q13813 2472 aaKnown RBP3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 SBNO2Q9Y2G9 1366 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 NFAT5O94916 1531 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 SERTM1A2A2V5 107 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 H0Y858 1186 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 TLR2O60603 784 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 ADRB1P08588 477 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 SDHBP21912 280 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 RPS12P25398 132 aaKnown RBP3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 NBL1P41271 181 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 TEAD4Q15561 434 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 KIF4BQ2VIQ3 1234 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 ANGEL2Q5VTE6 544 aaKnown RBP3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 TBC1D9BQ66K14 1250 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 MCTP2Q6DN12 878 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 PHTF2Q8N3S3 785 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 SUPT20HQ8NEM7 779 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 TP53INP1Q96A56 240 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 PBXIP1Q96AQ6 731 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 WNK4Q96J92 1243 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 RNPC3Q96LT9 517 aaKnown RBP3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 PTPN18Q99952 460 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 UPF3BQ9BZI7 483 aaKnown RBP3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 TLR9Q9NR96 1032 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 SERTAD1Q9UHV2 236 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 KCNH4Q9UQ05 1017 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 COL4A6Q14031 1691 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 HECTD1Q9ULT8 2610 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 DMXL1Q9Y485 3027 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 PIEZO2Q9H5I5 2752 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 SOS1Q07889 1333 aaPredicted RBP3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 ADGRA2Q96PE1 1338 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 ANKRD31Q8N7Z5 1873 aa3.16□□□□□ -1.9
TRAV1-1-201ENST00000542354 TONSLQ96HA7 1378 aa3.15□□□□□ -1.9
TRAV1-1-201ENST00000542354 A0A087WZG4 1122 aa3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 KLRG2A4D1S0 409 aaPredicted RBP3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 UNCXA6NJT0 531 aa3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 ADCY3O60266 1144 aa3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 COBLO75128 1261 aa3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 NOS2P35228 1153 aa3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 PSMA6P60900 246 aaKnown RBP3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 LRRC26Q2I0M4 334 aa3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 NBPF6Q5VWK0 638 aa3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 PRAMEF18Q5VWM3 479 aa3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 LRRC69Q6ZNQ3 347 aa3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 CCDC129Q6ZRS4 1044 aa3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 KIAA2013Q8IYS2 634 aa3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 L3MBTL2Q969R5 705 aa3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 NBPF4Q96M43 638 aa3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 CEP63Q96MT8 703 aa3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 SRA1Q9HD15 236 aaKnown RBP3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 JPH1Q9HDC5 661 aaPredicted RBP3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 BRD7Q9NPI1 651 aa3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 SCHIP1Q9P0W5 487 aaPredicted RBP3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 RNF112Q9ULX5 631 aa3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 ANGEL1Q9UNK9 670 aaKnown RBP3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 SRPK3Q9UPE1 567 aa3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 SPG7Q9UQ90 795 aa3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 COL3A1P02461 1466 aaPredicted RBP3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 ARFGEF2Q9Y6D5 1785 aa3.15□□□□□ -1.91
TRAV1-1-201ENST00000542354 SCN7AQ01118 1682 aa3.14□□□□□ -1.91
TRAV1-1-201ENST00000542354 ZNF831Q5JPB2 1677 aa3.14□□□□□ -1.91
TRAV1-1-201ENST00000542354 ROCK1Q13464 1354 aa3.14□□□□□ -1.91
TRAV1-1-201ENST00000542354 LRRC37A2A6NM11 1700 aa3.14□□□□□ -1.91
TRAV1-1-201ENST00000542354 COL11A2P13942 1736 aaPredicted RBP3.14□□□□□ -1.91
TRAV1-1-201ENST00000542354 EML1O00423 815 aa3.14□□□□□ -1.91
TRAV1-1-201ENST00000542354 RGS9O75916 674 aaPredicted RBP3.14□□□□□ -1.91
TRAV1-1-201ENST00000542354 NTRK1P04629 796 aa3.14□□□□□ -1.91
TRAV1-1-201ENST00000542354 MBTPS1Q14703 1052 aa3.14□□□□□ -1.91
TRAV1-1-201ENST00000542354 LCE3BQ5TA77 95 aa3.14□□□□□ -1.91
TRAV1-1-201ENST00000542354 FBXL6Q8N531 539 aa3.14□□□□□ -1.91
TRAV1-1-201ENST00000542354 KRTAP9-2Q9BYQ4 174 aa3.14□□□□□ -1.91
TRAV1-1-201ENST00000542354 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.14□□□□□ -1.91
TRAV1-1-201ENST00000542354 PCMTD2Q9NV79 361 aa3.14□□□□□ -1.91
TRAV1-1-201ENST00000542354 KLF15Q9UIH9 416 aa3.14□□□□□ -1.91
TRAV1-1-201ENST00000542354 IQSEC3Q9UPP2 1182 aaPredicted RBP3.14□□□□□ -1.91
TRAV1-1-201ENST00000542354 COL1A1P02452 1464 aaPredicted RBP3.14□□□□□ -1.91
TRAV1-1-201ENST00000542354 GAKO14976 1311 aa3.14□□□□□ -1.91
TRAV1-1-201ENST00000542354 PFASO15067 1338 aa3.14□□□□□ -1.91
TRAV1-1-201ENST00000542354 ASTN2O75129 1339 aaPredicted RBP3.14□□□□□ -1.91
TRAV1-1-201ENST00000542354 MYO15AQ9UKN7 3530 aa3.14□□□□□ -1.91
TRAV1-1-201ENST00000542354 C2CD3Q4AC94 2353 aa3.14□□□□□ -1.91
TRAV1-1-201ENST00000542354 FRYQ5TBA9 3013 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 SNED1Q8TER0 1413 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 A0A0A0MRY4 1105 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms