RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 MYH4Q9Y623 1939 aa17.53■□□□□ 0.4
CLPTM1-202ENST00000541297 SHTN1A0MZ66 631 aa17.53■□□□□ 0.4
CLPTM1-202ENST00000541297 NCBP1Q09161 790 aaKnown RBP17.53■□□□□ 0.4
CLPTM1-202ENST00000541297 DIS3L2Q8IYB7 885 aaKnown RBP17.53■□□□□ 0.4
CLPTM1-202ENST00000541297 TRIM5Q9C035 493 aa17.53■□□□□ 0.4
CLPTM1-202ENST00000541297 DHX36Q9H2U1 1008 aaKnown RBP17.53■□□□□ 0.4
CLPTM1-202ENST00000541297 CPVLQ9H3G5 476 aa17.53■□□□□ 0.4
CLPTM1-202ENST00000541297 PI4KBQ9UBF8 816 aa17.53■□□□□ 0.4
CLPTM1-202ENST00000541297 VEGFAP15692 232 aaPredicted RBP17.52■□□□□ 0.4
CLPTM1-202ENST00000541297 GRM4Q14833 912 aa17.52■□□□□ 0.4
CLPTM1-202ENST00000541297 LRRC47Q8N1G4 583 aaKnown RBP17.52■□□□□ 0.4
CLPTM1-202ENST00000541297 MTMR4Q9NYA4 1195 aa17.52■□□□□ 0.4
CLPTM1-202ENST00000541297 NR5A1Q13285 461 aa17.52■□□□□ 0.39
CLPTM1-202ENST00000541297 CIAPIN1Q6FI81 312 aa17.52■□□□□ 0.39
CLPTM1-202ENST00000541297 ATP2B2Q01814 1243 aa17.51■□□□□ 0.39
CLPTM1-202ENST00000541297 SAFBQ15424 915 aaKnown RBP eCLIP17.51■□□□□ 0.39
CLPTM1-202ENST00000541297 USP17L2Q6R6M4 530 aa17.51■□□□□ 0.39
CLPTM1-202ENST00000541297 BICD2Q8TD16 824 aa17.51■□□□□ 0.39
CLPTM1-202ENST00000541297 OXER1Q8TDS5 423 aa17.51■□□□□ 0.39
CLPTM1-202ENST00000541297 TRIM34Q9BYJ4 488 aa17.51■□□□□ 0.39
CLPTM1-202ENST00000541297 EHD4Q9H223 541 aa17.51■□□□□ 0.39
CLPTM1-202ENST00000541297 VEZTQ9HBM0 779 aa17.51■□□□□ 0.39
CLPTM1-202ENST00000541297 RCOR1Q9UKL0 485 aa17.51■□□□□ 0.39
CLPTM1-202ENST00000541297 TOP1P11387 765 aaKnown RBP17.51■□□□□ 0.39
CLPTM1-202ENST00000541297 ZNF75DP51815 510 aa17.51■□□□□ 0.39
CLPTM1-202ENST00000541297 PRELPP51888 382 aa17.51■□□□□ 0.39
CLPTM1-202ENST00000541297 PLA2G4DQ86XP0 818 aa17.51■□□□□ 0.39
CLPTM1-202ENST00000541297 CLIP2Q9UDT6 1046 aa17.51■□□□□ 0.39
CLPTM1-202ENST00000541297 PLIN4Q96Q06 1357 aa17.51■□□□□ 0.39
CLPTM1-202ENST00000541297 ME1P48163 572 aa17.5■□□□□ 0.39
CLPTM1-202ENST00000541297 ATL3Q6DD88 541 aa17.5■□□□□ 0.39
CLPTM1-202ENST00000541297 AGBL3Q8NEM8 1001 aa17.5■□□□□ 0.39
CLPTM1-202ENST00000541297 CSRNP1Q96S65 589 aa17.5■□□□□ 0.39
CLPTM1-202ENST00000541297 TMOD2Q9NZR1 351 aa17.5■□□□□ 0.39
CLPTM1-202ENST00000541297 ZNF70Q9UC06 446 aaPredicted RBP17.5■□□□□ 0.39
CLPTM1-202ENST00000541297 TNNT1P13805 278 aa17.5■□□□□ 0.39
CLPTM1-202ENST00000541297 RGS22Q8NE09 1264 aa17.5■□□□□ 0.39
CLPTM1-202ENST00000541297 RTEL1Q9NZ71 1219 aa17.5■□□□□ 0.39
CLPTM1-202ENST00000541297 SCAF8Q9UPN6 1271 aaKnown RBP17.5■□□□□ 0.39
CLPTM1-202ENST00000541297 ARFGEF1Q9Y6D6 1849 aa17.5■□□□□ 0.39
CLPTM1-202ENST00000541297 XBP1P17861 261 aa17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 STK38Q15208 465 aa17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 SLC35G1Q2M3R5 365 aa17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 NOSTRINQ8IVI9 506 aa17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 MAP3K14Q99558 947 aa17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 GREB1LQ9C091 1923 aaPredicted RBP17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 IGKV6D-41A0A0C4DH26 115 aa17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 SMTNL1A8MU46 457 aa17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 USP17L5A8MUK1 530 aa17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 CYTH3O43739 400 aa17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 NR1I2O75469 434 aa17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 SCG2P13521 617 aa17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 NAA30Q147X3 362 aaPredicted RBP17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 CERKLQ49MI3 558 aaPredicted RBP17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 GPKOWQ92917 476 aaPredicted RBP eCLIP17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 CLSTN2Q9H4D0 955 aa17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 FRMPD2Q68DX3 1309 aaPredicted RBP17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 PALM3A6NDB9 673 aaPredicted RBP17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 KLRF2D3W0D1 207 aa17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 ENTPD3O75355 529 aa17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 NPM3O75607 178 aaKnown RBP17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 KIF20AO95235 890 aa17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 GDF11O95390 407 aa17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 TTLL1O95922 423 aa17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 PARP1P09874 1014 aaKnown RBP17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 NBPF9Q3BBW0 867 aa17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 RBM26Q5T8P6 1007 aaKnown RBP17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 ANO1Q5XXA6 986 aa17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 LINC00301Q8NCQ3 95 aa17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 DNAJC25Q9H1X3 360 aa17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 DDX19AQ9NUU7 478 aaKnown RBP17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 POLR3EQ9NVU0 708 aa17.49■□□□□ 0.39
CLPTM1-202ENST00000541297 NOVP48745 357 aa17.48■□□□□ 0.39
CLPTM1-202ENST00000541297 SF3A1Q15459 793 aaKnown RBP17.48■□□□□ 0.39
CLPTM1-202ENST00000541297 RBM43Q6ZSC3 357 aaKnown RBP17.48■□□□□ 0.39
CLPTM1-202ENST00000541297 PHF20Q9BVI0 1012 aa17.48■□□□□ 0.39
CLPTM1-202ENST00000541297 GJA3Q9Y6H8 435 aa17.48■□□□□ 0.39
CLPTM1-202ENST00000541297 ZNF165P49910 485 aa17.48■□□□□ 0.39
CLPTM1-202ENST00000541297 PFKFB3Q16875 520 aaPredicted RBP17.48■□□□□ 0.39
CLPTM1-202ENST00000541297 CACTINQ8WUQ7 758 aaKnown RBP17.48■□□□□ 0.39
CLPTM1-202ENST00000541297 FEZ1Q99689 392 aa17.48■□□□□ 0.39
CLPTM1-202ENST00000541297 ATRNL1Q5VV63 1379 aa17.47■□□□□ 0.39
CLPTM1-202ENST00000541297 RAD21O60216 631 aa17.47■□□□□ 0.39
CLPTM1-202ENST00000541297 EGFRP00533 1210 aa17.47■□□□□ 0.39
CLPTM1-202ENST00000541297 GNAQP50148 359 aa17.47■□□□□ 0.39
CLPTM1-202ENST00000541297 SPDYE2Q495Y8 402 aa17.47■□□□□ 0.39
CLPTM1-202ENST00000541297 CDAN1Q8IWY9 1227 aa17.47■□□□□ 0.39
CLPTM1-202ENST00000541297 FOXP1Q9H334 677 aaPredicted RBP17.47■□□□□ 0.39
CLPTM1-202ENST00000541297 SPON1Q9HCB6 807 aa17.47■□□□□ 0.39
CLPTM1-202ENST00000541297 PCDHA7Q9UN72 937 aa17.47■□□□□ 0.39
CLPTM1-202ENST00000541297 WNT10BO00744 389 aa17.47■□□□□ 0.39
CLPTM1-202ENST00000541297 PDHBP11177 359 aa17.47■□□□□ 0.39
CLPTM1-202ENST00000541297 ATP2B1P20020 1258 aa17.47■□□□□ 0.39
CLPTM1-202ENST00000541297 MARCKSP29966 332 aaPredicted RBP17.47■□□□□ 0.39
CLPTM1-202ENST00000541297 TNIP1Q15025 636 aa17.47■□□□□ 0.39
CLPTM1-202ENST00000541297 CCDC144BQ3MJ40 725 aa17.47■□□□□ 0.39
CLPTM1-202ENST00000541297 FOXP4Q8IVH2 680 aaPredicted RBP17.47■□□□□ 0.39
CLPTM1-202ENST00000541297 UBA5Q9GZZ9 404 aa17.47■□□□□ 0.39
CLPTM1-202ENST00000541297 VAT1LQ9HCJ6 419 aa17.47■□□□□ 0.39
CLPTM1-202ENST00000541297 MYOZ2Q9NPC6 264 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms