RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 MTMR4Q9NYA4 1195 aa19.68■□□□□ 0.74
UBC-208ENST00000540700 A0A1W2PPC1 479 aa19.67■□□□□ 0.74
UBC-208ENST00000540700 CXCL11O14625 94 aa19.67■□□□□ 0.74
UBC-208ENST00000540700 GADL1Q6ZQY3 521 aa19.67■□□□□ 0.74
UBC-208ENST00000540700 ZNF280CQ8ND82 737 aa19.67■□□□□ 0.74
UBC-208ENST00000540700 SENP2Q9HC62 589 aa19.67■□□□□ 0.74
UBC-208ENST00000540700 TCP11L1Q9NUJ3 509 aa19.67■□□□□ 0.74
UBC-208ENST00000540700 TNPO2O14787 897 aaKnown RBP19.66■□□□□ 0.74
UBC-208ENST00000540700 MTMR2Q13614 643 aa19.66■□□□□ 0.74
UBC-208ENST00000540700 IL17RAQ96F46 866 aa19.66■□□□□ 0.74
UBC-208ENST00000540700 TCEANC2Q96MN5 208 aa19.66■□□□□ 0.74
UBC-208ENST00000540700 JAKMIP1Q96N16 626 aaKnown RBP19.66■□□□□ 0.74
UBC-208ENST00000540700 NEK1Q96PY6 1258 aa19.66■□□□□ 0.74
UBC-208ENST00000540700 KIF2CQ99661 725 aa19.66■□□□□ 0.74
UBC-208ENST00000540700 KANSL2Q9H9L4 492 aa19.66■□□□□ 0.74
UBC-208ENST00000540700 A0A0G2JLL6 359 aaPredicted RBP19.65■□□□□ 0.74
UBC-208ENST00000540700 ZKSCAN1P17029 563 aaPredicted RBP19.65■□□□□ 0.74
UBC-208ENST00000540700 SEC23AQ15436 765 aa19.65■□□□□ 0.74
UBC-208ENST00000540700 RASGRP2Q7LDG7 609 aa19.65■□□□□ 0.74
UBC-208ENST00000540700 PRRT2Q7Z6L0 340 aaPredicted RBP19.65■□□□□ 0.74
UBC-208ENST00000540700 RALYLQ86SE5 291 aaKnown RBP19.65■□□□□ 0.74
UBC-208ENST00000540700 ENAHQ8N8S7 591 aaPredicted RBP19.65■□□□□ 0.74
UBC-208ENST00000540700 PAWRQ96IZ0 340 aaKnown RBP19.65■□□□□ 0.74
UBC-208ENST00000540700 LRRC2Q9BYS8 371 aa19.65■□□□□ 0.74
UBC-208ENST00000540700 NYAP2Q9P242 653 aa19.65■□□□□ 0.74
UBC-208ENST00000540700 PTPRFP10586 1907 aa19.64■□□□□ 0.74
UBC-208ENST00000540700 MCCP23508 829 aa19.64■□□□□ 0.73
UBC-208ENST00000540700 BACE1P56817 501 aa19.64■□□□□ 0.73
UBC-208ENST00000540700 EXOSC10Q01780 885 aaKnown RBP19.64■□□□□ 0.73
UBC-208ENST00000540700 ATP2B2Q01814 1243 aa19.64■□□□□ 0.73
UBC-208ENST00000540700 TRDNQ13061 729 aa19.64■□□□□ 0.73
UBC-208ENST00000540700 ZYXQ15942 572 aaKnown RBP19.64■□□□□ 0.73
UBC-208ENST00000540700 FASTKD5Q7L8L6 764 aaKnown RBP19.64■□□□□ 0.73
UBC-208ENST00000540700 LRRC47Q8N1G4 583 aaKnown RBP19.64■□□□□ 0.73
UBC-208ENST00000540700 SMCR8Q8TEV9 937 aaPredicted RBP19.64■□□□□ 0.73
UBC-208ENST00000540700 DIS3LQ8TF46 1054 aaKnown RBP19.64■□□□□ 0.73
UBC-208ENST00000540700 ZSCAN10Q96SZ4 725 aaPredicted RBP19.64■□□□□ 0.73
UBC-208ENST00000540700 C22orf23Q9BZE7 217 aa19.64■□□□□ 0.73
UBC-208ENST00000540700 EMILIN3Q9NT22 766 aa19.64■□□□□ 0.73
UBC-208ENST00000540700 CLIP2Q9UDT6 1046 aa19.64■□□□□ 0.73
UBC-208ENST00000540700 TMX2Q9Y320 296 aa19.64■□□□□ 0.73
UBC-208ENST00000540700 TNKSO95271 1327 aa19.64■□□□□ 0.73
UBC-208ENST00000540700 PRC1O43663 620 aa19.63■□□□□ 0.73
UBC-208ENST00000540700 TTLL1O95922 423 aa19.63■□□□□ 0.73
UBC-208ENST00000540700 HMGCS2P54868 508 aa19.63■□□□□ 0.73
UBC-208ENST00000540700 KRT32Q14532 448 aa19.63■□□□□ 0.73
UBC-208ENST00000540700 SH3D19Q5HYK7 790 aa19.63■□□□□ 0.73
UBC-208ENST00000540700 IGDCC4Q8TDY8 1250 aa19.63■□□□□ 0.73
UBC-208ENST00000540700 PXYLP1Q8TE99 480 aa19.63■□□□□ 0.73
UBC-208ENST00000540700 MKL1Q969V6 931 aa19.63■□□□□ 0.73
UBC-208ENST00000540700 KIAA1683Q9H0B3 1180 aa19.63■□□□□ 0.73
UBC-208ENST00000540700 AS3MTQ9HBK9 375 aa19.63■□□□□ 0.73
UBC-208ENST00000540700 ZMYND8Q9ULU4 1186 aaPredicted RBP19.63■□□□□ 0.73
UBC-208ENST00000540700 USP17L10C9JJH3 530 aa19.62■□□□□ 0.73
UBC-208ENST00000540700 RBM25P49756 843 aaKnown RBP19.62■□□□□ 0.73
UBC-208ENST00000540700 NT5C2P49902 561 aa19.62■□□□□ 0.73
UBC-208ENST00000540700 C7orf61Q8IZ16 206 aa19.62■□□□□ 0.73
UBC-208ENST00000540700 ANKS1AQ92625 1134 aa19.62■□□□□ 0.73
UBC-208ENST00000540700 TMEM47Q9BQJ4 181 aa19.62■□□□□ 0.73
UBC-208ENST00000540700 TBC1D2Q9BYX2 928 aa19.62■□□□□ 0.73
UBC-208ENST00000540700 ZSWIM6Q9HCJ5 1215 aa19.62■□□□□ 0.73
UBC-208ENST00000540700 PAK6Q9NQU5 681 aaPredicted RBP19.62■□□□□ 0.73
UBC-208ENST00000540700 STX8Q9UNK0 236 aa19.62■□□□□ 0.73
UBC-208ENST00000540700 LOC285556D6RIA3 1793 aa19.62■□□□□ 0.73
UBC-208ENST00000540700 SH2B2O14492 632 aaPredicted RBP19.61■□□□□ 0.73
UBC-208ENST00000540700 EIF5BO60841 1220 aaKnown RBP19.61■□□□□ 0.73
UBC-208ENST00000540700 CASTP20810 708 aaKnown RBP19.61■□□□□ 0.73
UBC-208ENST00000540700 MCM5P33992 734 aa19.61■□□□□ 0.73
UBC-208ENST00000540700 ANAPC15P60006 121 aa19.61■□□□□ 0.73
UBC-208ENST00000540700 IRF5Q13568 498 aa19.61■□□□□ 0.73
UBC-208ENST00000540700 TREML2Q5T2D2 321 aa19.61■□□□□ 0.73
UBC-208ENST00000540700 DHX32Q7L7V1 743 aaKnown RBP19.61■□□□□ 0.73
UBC-208ENST00000540700 NECAB2Q7Z6G3 386 aa19.61■□□□□ 0.73
UBC-208ENST00000540700 DEFB123Q8N688 67 aa19.61■□□□□ 0.73
UBC-208ENST00000540700 ANKRD13CQ8N6S4 541 aa19.61■□□□□ 0.73
UBC-208ENST00000540700 TBC1D32Q96NH3 1257 aa19.61■□□□□ 0.73
UBC-208ENST00000540700 UPF3BQ9BZI7 483 aaKnown RBP19.61■□□□□ 0.73
UBC-208ENST00000540700 LY9Q9HBG7 655 aa19.61■□□□□ 0.73
UBC-208ENST00000540700 ARHGEF10LQ9HCE6 1279 aa19.61■□□□□ 0.73
UBC-208ENST00000540700 RPS6KB1P23443 525 aa19.6■□□□□ 0.73
UBC-208ENST00000540700 Q7L0L9 218 aa19.6■□□□□ 0.73
UBC-208ENST00000540700 IQCA1Q86XH1 822 aa19.6■□□□□ 0.73
UBC-208ENST00000540700 COA7Q96BR5 231 aa19.6■□□□□ 0.73
UBC-208ENST00000540700 CHMP4CQ96CF2 233 aa19.6■□□□□ 0.73
UBC-208ENST00000540700 C12orf42Q96LP6 360 aa19.6■□□□□ 0.73
UBC-208ENST00000540700 FEZ1Q99689 392 aa19.6■□□□□ 0.73
UBC-208ENST00000540700 TM6SF1Q9BZW5 370 aa19.6■□□□□ 0.73
UBC-208ENST00000540700 CRISPLD2Q9H0B8 497 aa19.6■□□□□ 0.73
UBC-208ENST00000540700 VCPKMTQ9H867 229 aa19.6■□□□□ 0.73
UBC-208ENST00000540700 MYH4Q9Y623 1939 aa19.59■□□□□ 0.73
UBC-208ENST00000540700 IFIT3O14879 490 aaKnown RBP19.59■□□□□ 0.73
UBC-208ENST00000540700 NDUFB10O96000 172 aa19.59■□□□□ 0.73
UBC-208ENST00000540700 BLOC1S2Q6QNY1 142 aa19.59■□□□□ 0.73
UBC-208ENST00000540700 USP17L2Q6R6M4 530 aa19.59■□□□□ 0.73
UBC-208ENST00000540700 DGKHQ86XP1 1220 aa19.59■□□□□ 0.73
UBC-208ENST00000540700 SPICE1Q8N0Z3 855 aa19.59■□□□□ 0.73
UBC-208ENST00000540700 NUP88Q99567 741 aaPredicted RBP19.59■□□□□ 0.73
UBC-208ENST00000540700 GDF15Q99988 308 aa19.59■□□□□ 0.73
UBC-208ENST00000540700 UBAC1Q9BSL1 405 aa19.59■□□□□ 0.73
UBC-208ENST00000540700 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.59■□□□□ 0.732e-7■□□□□ 11.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms