RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 FAM109BQ6ICB4 259 aaPredicted RBP18.04■□□□□ 0.48
USB1-203ENST00000539737 MAFAQ8NHW3 353 aaPredicted RBP18.04■□□□□ 0.48
USB1-203ENST00000539737 SUPT16HQ9Y5B9 1047 aaKnown RBP18.04■□□□□ 0.48
USB1-203ENST00000539737 GOLIM4O00461 696 aa18.03■□□□□ 0.48
USB1-203ENST00000539737 RAB11FIP3O75154 756 aa18.03■□□□□ 0.48
USB1-203ENST00000539737 FLOT1O75955 427 aa18.03■□□□□ 0.48
USB1-203ENST00000539737 TLE2Q04725 743 aa18.03■□□□□ 0.48
USB1-203ENST00000539737 SLC9C2Q5TAH2 1124 aa18.03■□□□□ 0.48
USB1-203ENST00000539737 OLFML2BQ68BL8 750 aa18.03■□□□□ 0.48
USB1-203ENST00000539737 KIF1BPQ96EK5 621 aa18.03■□□□□ 0.48
USB1-203ENST00000539737 MAML3Q96JK9 1138 aa18.03■□□□□ 0.48
USB1-203ENST00000539737 TCRBV5S4A2TA0A5A2 114 aa18.02■□□□□ 0.48
USB1-203ENST00000539737 SEPT4O43236 478 aa18.02■□□□□ 0.48
USB1-203ENST00000539737 MSCO60682 206 aa18.02■□□□□ 0.48
USB1-203ENST00000539737 DSG3P32926 999 aa18.02■□□□□ 0.48
USB1-203ENST00000539737 TMEM132BQ14DG7 1078 aa18.02■□□□□ 0.48
USB1-203ENST00000539737 RHPN1Q8TCX5 695 aa18.02■□□□□ 0.48
USB1-203ENST00000539737 DCP1AQ9NPI6 582 aaPredicted RBP18.02■□□□□ 0.48
USB1-203ENST00000539737 SNX17Q15036 470 aa18.01■□□□□ 0.47
USB1-203ENST00000539737 STK11IPQ8N1F8 1099 aa18.01■□□□□ 0.47
USB1-203ENST00000539737 USP38Q8NB14 1042 aa18.01■□□□□ 0.47
USB1-203ENST00000539737 ARRDC4Q8NCT1 418 aa18.01■□□□□ 0.47
USB1-203ENST00000539737 CRNKL1Q9BZJ0 848 aaKnown RBP18.01■□□□□ 0.47
USB1-203ENST00000539737 PLXNA1Q9UIW2 1896 aa18.01■□□□□ 0.47
USB1-203ENST00000539737 RAD21O60216 631 aa18■□□□□ 0.47
USB1-203ENST00000539737 PQBP1O60828 265 aaKnown RBP18■□□□□ 0.47
USB1-203ENST00000539737 CERS3Q8IU89 383 aa18■□□□□ 0.47
USB1-203ENST00000539737 CLASRPQ8N2M8 674 aaKnown RBP18■□□□□ 0.47
USB1-203ENST00000539737 PRDM6Q9NQX0 595 aa18■□□□□ 0.47
USB1-203ENST00000539737 MUC3AQ02505 3323 aa18■□□□□ 0.47
USB1-203ENST00000539737 MBD4O95243 580 aa17.99■□□□□ 0.47
USB1-203ENST00000539737 ICA1Q05084 483 aa17.99■□□□□ 0.47
USB1-203ENST00000539737 SHCBP1Q8NEM2 672 aa17.99■□□□□ 0.47
USB1-203ENST00000539737 NUP88Q99567 741 aaPredicted RBP17.99■□□□□ 0.47
USB1-203ENST00000539737 XPNPEP3Q9NQH7 507 aa17.99■□□□□ 0.47
USB1-203ENST00000539737 HOXC10Q9NYD6 342 aa17.99■□□□□ 0.47
USB1-203ENST00000539737 MYADML2A6NDP7 307 aa17.98■□□□□ 0.47
USB1-203ENST00000539737 FOSL2P15408 326 aa17.98■□□□□ 0.47
USB1-203ENST00000539737 TMED8Q6PL24 325 aaPredicted RBP17.98■□□□□ 0.47
USB1-203ENST00000539737 TMEM179Q6ZVK1 233 aa17.98■□□□□ 0.47
USB1-203ENST00000539737 RNPC3Q96LT9 517 aaKnown RBP17.98■□□□□ 0.47
USB1-203ENST00000539737 MMP19Q99542 508 aa17.98■□□□□ 0.47
USB1-203ENST00000539737 VCPKMTQ9H867 229 aa17.98■□□□□ 0.47
USB1-203ENST00000539737 PCDHB15Q9Y5E8 787 aa17.98■□□□□ 0.47
USB1-203ENST00000539737 STRNO43815 780 aa17.97■□□□□ 0.47
USB1-203ENST00000539737 EEF2P13639 858 aaKnown RBP17.97■□□□□ 0.47
USB1-203ENST00000539737 SLC4A3P48751 1232 aa17.97■□□□□ 0.47
USB1-203ENST00000539737 GRIN2CQ14957 1233 aa17.97■□□□□ 0.47
USB1-203ENST00000539737 LRRCC1Q9C099 1032 aa17.97■□□□□ 0.47
USB1-203ENST00000539737 DCTPP1Q9H773 170 aa17.97■□□□□ 0.47
USB1-203ENST00000539737 PHF24Q9UPV7 400 aa17.97■□□□□ 0.47
USB1-203ENST00000539737 TMX2Q9Y320 296 aa17.97■□□□□ 0.47
USB1-203ENST00000539737 A0A1W2PQ45 241 aaPredicted RBP17.96■□□□□ 0.47
USB1-203ENST00000539737 A0A1W2PQY0 241 aa17.96■□□□□ 0.47
USB1-203ENST00000539737 IFIT2P09913 472 aaKnown RBP17.96■□□□□ 0.47
USB1-203ENST00000539737 FCER1AP12319 257 aa17.96■□□□□ 0.47
USB1-203ENST00000539737 CDK8P49336 464 aa17.96■□□□□ 0.47
USB1-203ENST00000539737 TTF1Q15361 905 aaPredicted RBP17.96■□□□□ 0.47
USB1-203ENST00000539737 FAM83BQ5T0W9 1011 aa17.96■□□□□ 0.47
USB1-203ENST00000539737 BOLA2Q9H3K6 86 aa17.96■□□□□ 0.47
USB1-203ENST00000539737 MROH8Q9H579 483 aa17.96■□□□□ 0.47
USB1-203ENST00000539737 GRXCR1A8MXD5 290 aa17.95■□□□□ 0.46
USB1-203ENST00000539737 ADCY6O43306 1168 aa17.95■□□□□ 0.46
USB1-203ENST00000539737 CLTBP09497 229 aa17.95■□□□□ 0.46
USB1-203ENST00000539737 ZNF865P0CJ78 1059 aaPredicted RBP17.95■□□□□ 0.46
USB1-203ENST00000539737 PTGS1P23219 599 aa17.95■□□□□ 0.46
USB1-203ENST00000539737 ZNF792Q3KQV3 632 aa17.95■□□□□ 0.46
USB1-203ENST00000539737 EXOC6Q8TAG9 804 aa17.95■□□□□ 0.46
USB1-203ENST00000539737 ARHGEF10LQ9HCE6 1279 aa17.95■□□□□ 0.46
USB1-203ENST00000539737 RAPGEFL1Q9UHV5 662 aa17.95■□□□□ 0.46
USB1-203ENST00000539737 RIPK3Q9Y572 518 aa17.95■□□□□ 0.46
USB1-203ENST00000539737 MCM3APO60318 1980 aa17.95■□□□□ 0.46
USB1-203ENST00000539737 USP17L12C9JPN9 530 aa17.94■□□□□ 0.46
USB1-203ENST00000539737 USP17L21D6R901 530 aa17.94■□□□□ 0.46
USB1-203ENST00000539737 RARBP10826 455 aa17.94■□□□□ 0.46
USB1-203ENST00000539737 SMAD3P84022 425 aaKnown RBP17.94■□□□□ 0.46
USB1-203ENST00000539737 HDAC1Q13547 482 aaPredicted RBP17.94■□□□□ 0.46
USB1-203ENST00000539737 REPS2Q8NFH8 660 aa17.94■□□□□ 0.46
USB1-203ENST00000539737 PPM1EQ8WY54 764 aa17.94■□□□□ 0.46
USB1-203ENST00000539737 CHMP4CQ96CF2 233 aa17.94■□□□□ 0.46
USB1-203ENST00000539737 TINF2Q9BSI4 451 aa17.94■□□□□ 0.46
USB1-203ENST00000539737 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.94■□□□□ 0.46
USB1-203ENST00000539737 DDX49Q9Y6V7 483 aaKnown RBP17.94■□□□□ 0.46
USB1-203ENST00000539737 WDR46O15213 610 aaKnown RBP17.93■□□□□ 0.46
USB1-203ENST00000539737 ADAMTS4O75173 837 aa17.93■□□□□ 0.46
USB1-203ENST00000539737 RAG1P15918 1043 aa17.93■□□□□ 0.46
USB1-203ENST00000539737 ADD2P35612 726 aa17.93■□□□□ 0.46
USB1-203ENST00000539737 PBX2P40425 430 aa17.93■□□□□ 0.46
USB1-203ENST00000539737 FAAP100Q0VG06 881 aa17.93■□□□□ 0.46
USB1-203ENST00000539737 C12orf60Q5U649 245 aa17.93■□□□□ 0.46
USB1-203ENST00000539737 MB21D1Q8N884 522 aa17.93■□□□□ 0.46
USB1-203ENST00000539737 TMEM39AQ9NV64 488 aa17.93■□□□□ 0.46
USB1-203ENST00000539737 ZNF214Q9UL59 606 aaPredicted RBP17.93■□□□□ 0.46
USB1-203ENST00000539737 SYNRGQ9UMZ2 1314 aa17.93■□□□□ 0.46
USB1-203ENST00000539737 MYO9BQ13459 2157 aa17.93■□□□□ 0.46
USB1-203ENST00000539737 RBAK-RBAKDNI3L0D1 243 aa17.92■□□□□ 0.46
USB1-203ENST00000539737 VWA5AO00534 786 aa17.92■□□□□ 0.46
USB1-203ENST00000539737 STAT3P40763 770 aa17.92■□□□□ 0.46
USB1-203ENST00000539737 RIOX2Q8IUF8 465 aa17.92■□□□□ 0.46
USB1-203ENST00000539737 ABRAQ8N0Z2 381 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms