RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 FAM47AQ5JRC9 791 aa20.41■□□□□ 0.86
SFSWAP-205ENST00000537164 PPP4R3BQ5MIZ7 849 aa20.41■□□□□ 0.86
SFSWAP-205ENST00000537164 CWC27Q6UX04 472 aaKnown RBP20.41■□□□□ 0.86
SFSWAP-205ENST00000537164 TRMT44Q8IYL2 757 aaKnown RBP20.41■□□□□ 0.86
SFSWAP-205ENST00000537164 GMCL1P1Q8NEA9 526 aa20.41■□□□□ 0.86
SFSWAP-205ENST00000537164 NKX2-3Q8TAU0 364 aa20.41■□□□□ 0.86
SFSWAP-205ENST00000537164 ATG4CQ96DT6 458 aa20.41■□□□□ 0.86
SFSWAP-205ENST00000537164 MOV10L1Q9BXT6 1211 aaKnown RBP20.41■□□□□ 0.86
SFSWAP-205ENST00000537164 SPATC1LQ9H0A9 340 aa20.41■□□□□ 0.86
SFSWAP-205ENST00000537164 DIAPH3Q9NSV4 1193 aa20.41■□□□□ 0.86
SFSWAP-205ENST00000537164 SLC15A5A6NIM6 579 aa20.4■□□□□ 0.86
SFSWAP-205ENST00000537164 NDUFB10O96000 172 aa20.4■□□□□ 0.86
SFSWAP-205ENST00000537164 MYCP01106 439 aaPredicted RBP20.4■□□□□ 0.86
SFSWAP-205ENST00000537164 PCP11498 1178 aaKnown RBP20.4■□□□□ 0.86
SFSWAP-205ENST00000537164 PTPREP23469 700 aa20.4■□□□□ 0.86
SFSWAP-205ENST00000537164 FAM83BQ5T0W9 1011 aa20.4■□□□□ 0.86
SFSWAP-205ENST00000537164 TRIB2Q92519 343 aa20.4■□□□□ 0.86
SFSWAP-205ENST00000537164 RNF208Q9H0X6 261 aa20.4■□□□□ 0.86
SFSWAP-205ENST00000537164 INCENPQ9NQS7 918 aa20.4■□□□□ 0.86
SFSWAP-205ENST00000537164 PAK6Q9NQU5 681 aaPredicted RBP20.4■□□□□ 0.86
SFSWAP-205ENST00000537164 IL17RBQ9NRM6 502 aa20.4■□□□□ 0.86
SFSWAP-205ENST00000537164 PPP1R9AQ9ULJ8 1098 aa20.4■□□□□ 0.86
SFSWAP-205ENST00000537164 STRNO43815 780 aa20.39■□□□□ 0.85
SFSWAP-205ENST00000537164 HOXC6P09630 235 aa20.39■□□□□ 0.85
SFSWAP-205ENST00000537164 RGS2P41220 211 aa20.39■□□□□ 0.85
SFSWAP-205ENST00000537164 MAP2K5Q13163 448 aa20.39■□□□□ 0.85
SFSWAP-205ENST00000537164 GRB14Q14449 540 aa20.39■□□□□ 0.85
SFSWAP-205ENST00000537164 MAP3K21Q5TCX8 1036 aa20.39■□□□□ 0.85
SFSWAP-205ENST00000537164 SHISA4Q96DD7 197 aa20.39■□□□□ 0.85
SFSWAP-205ENST00000537164 APBA2Q99767 749 aa20.39■□□□□ 0.85
SFSWAP-205ENST00000537164 UNC93B1Q9H1C4 597 aa20.39■□□□□ 0.85
SFSWAP-205ENST00000537164 FBXO28Q9NVF7 368 aa20.39■□□□□ 0.85
SFSWAP-205ENST00000537164 ZNFX1Q9P2E3 1918 aaKnown RBP20.38■□□□□ 0.85
SFSWAP-205ENST00000537164 TSPY2A6NKD2 308 aa20.38■□□□□ 0.85
SFSWAP-205ENST00000537164 VWA5AO00534 786 aa20.38■□□□□ 0.85
SFSWAP-205ENST00000537164 CYP2B6P20813 491 aa20.38■□□□□ 0.85
SFSWAP-205ENST00000537164 TMEM132BQ14DG7 1078 aa20.38■□□□□ 0.85
SFSWAP-205ENST00000537164 REPS2Q8NFH8 660 aa20.38■□□□□ 0.85
SFSWAP-205ENST00000537164 DSCC1Q9BVC3 393 aa20.38■□□□□ 0.85
SFSWAP-205ENST00000537164 NBPF3Q9H094 633 aa20.38■□□□□ 0.85
SFSWAP-205ENST00000537164 MROH8Q9H579 483 aa20.38■□□□□ 0.85
SFSWAP-205ENST00000537164 NT5C2P49902 561 aa20.37■□□□□ 0.85
SFSWAP-205ENST00000537164 PRPF38AQ8NAV1 312 aaKnown RBP20.37■□□□□ 0.85
SFSWAP-205ENST00000537164 STAG1Q8WVM7 1258 aa20.37■□□□□ 0.85
SFSWAP-205ENST00000537164 NUP88Q99567 741 aaPredicted RBP20.37■□□□□ 0.85
SFSWAP-205ENST00000537164 SLF1Q9BQI6 1058 aa20.37■□□□□ 0.85
SFSWAP-205ENST00000537164 TCP11L1Q9NUJ3 509 aa20.37■□□□□ 0.85
SFSWAP-205ENST00000537164 ZNF214Q9UL59 606 aaPredicted RBP20.37■□□□□ 0.85
SFSWAP-205ENST00000537164 IVNS1ABPQ9Y6Y0 642 aa20.37■□□□□ 0.85
SFSWAP-205ENST00000537164 RPTORQ8N122 1335 aa20.36■□□□□ 0.85
SFSWAP-205ENST00000537164 RANBP6O60518 1105 aaKnown RBP20.36■□□□□ 0.85
SFSWAP-205ENST00000537164 SGPL1O95470 568 aa20.36■□□□□ 0.85
SFSWAP-205ENST00000537164 SLC25A27O95847 323 aa20.36■□□□□ 0.85
SFSWAP-205ENST00000537164 IGHA2P01877 340 aa20.36■□□□□ 0.85
SFSWAP-205ENST00000537164 ERCC3P19447 782 aa20.36■□□□□ 0.85
SFSWAP-205ENST00000537164 AKNAD1Q5T1N1 836 aa20.36■□□□□ 0.85
SFSWAP-205ENST00000537164 UBE2Q1Q7Z7E8 422 aa20.36■□□□□ 0.85
SFSWAP-205ENST00000537164 ABRAQ8N0Z2 381 aa20.36■□□□□ 0.85
SFSWAP-205ENST00000537164 U2AF1L4Q8WU68 220 aaKnown RBP20.36■□□□□ 0.85
SFSWAP-205ENST00000537164 GMCL1Q96IK5 515 aa20.36■□□□□ 0.85
SFSWAP-205ENST00000537164 CWC22Q9HCG8 908 aaKnown RBP20.36■□□□□ 0.85
SFSWAP-205ENST00000537164 RAD50Q92878 1312 aa20.35■□□□□ 0.85
SFSWAP-205ENST00000537164 ATP2A1O14983 1001 aa20.35■□□□□ 0.85
SFSWAP-205ENST00000537164 RAD21O60216 631 aa20.35■□□□□ 0.85
SFSWAP-205ENST00000537164 TRIM32Q13049 653 aa20.35■□□□□ 0.85
SFSWAP-205ENST00000537164 RIOX2Q8IUF8 465 aa20.35■□□□□ 0.85
SFSWAP-205ENST00000537164 LRRC47Q8N1G4 583 aaKnown RBP20.35■□□□□ 0.85
SFSWAP-205ENST00000537164 CRISPLD2Q9H0B8 497 aa20.35■□□□□ 0.85
SFSWAP-205ENST00000537164 IL25Q9H293 177 aa20.35■□□□□ 0.85
SFSWAP-205ENST00000537164 FEM1BQ9UK73 627 aa20.35■□□□□ 0.85
SFSWAP-205ENST00000537164 NMT2O60551 498 aa20.34■□□□□ 0.85
SFSWAP-205ENST00000537164 PLA2G6O60733 806 aa20.34■□□□□ 0.85
SFSWAP-205ENST00000537164 ZKSCAN1P17029 563 aaPredicted RBP20.34■□□□□ 0.85
SFSWAP-205ENST00000537164 HAND2P61296 217 aa20.34■□□□□ 0.85
SFSWAP-205ENST00000537164 CCL14Q16627 93 aa20.34■□□□□ 0.85
SFSWAP-205ENST00000537164 WDR78Q5VTH9 848 aa20.34■□□□□ 0.85
SFSWAP-205ENST00000537164 SLFN13Q68D06 897 aa20.34■□□□□ 0.85
SFSWAP-205ENST00000537164 MFSD6Q6ZSS7 791 aa20.34■□□□□ 0.85
SFSWAP-205ENST00000537164 TBC1D10CQ8IV04 446 aa20.34■□□□□ 0.85
SFSWAP-205ENST00000537164 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.34■□□□□ 0.851e-9■■■■■ 54.1
SFSWAP-205ENST00000537164 RNF41Q9H4P4 317 aaPredicted RBP20.34■□□□□ 0.85
SFSWAP-205ENST00000537164 HMX1Q9NP08 348 aaPredicted RBP20.34■□□□□ 0.85
SFSWAP-205ENST00000537164 STX8Q9UNK0 236 aa20.34■□□□□ 0.85
SFSWAP-205ENST00000537164 ZNF213O14771 459 aa20.33■□□□□ 0.85
SFSWAP-205ENST00000537164 BMP3P12645 472 aa20.33■□□□□ 0.85
SFSWAP-205ENST00000537164 CHMLP26374 656 aa20.33■□□□□ 0.85
SFSWAP-205ENST00000537164 ADORA2AP29274 412 aa20.33■□□□□ 0.85
SFSWAP-205ENST00000537164 COPB2P35606 906 aa20.33■□□□□ 0.85
SFSWAP-205ENST00000537164 STAT3P40763 770 aa20.33■□□□□ 0.85
SFSWAP-205ENST00000537164 PLS1Q14651 629 aa20.33■□□□□ 0.85
SFSWAP-205ENST00000537164 DEFB118Q96PH6 123 aa20.33■□□□□ 0.85
SFSWAP-205ENST00000537164 FDX1P10109 184 aa20.32■□□□□ 0.84
SFSWAP-205ENST00000537164 PRKAR2AP13861 404 aaKnown RBP20.32■□□□□ 0.84
SFSWAP-205ENST00000537164 CACNB2Q08289 660 aaPredicted RBP20.32■□□□□ 0.84
SFSWAP-205ENST00000537164 CENPQQ7L2Z9 268 aaPredicted RBP20.32■□□□□ 0.84
SFSWAP-205ENST00000537164 NCAPG2Q86XI2 1143 aa20.32■□□□□ 0.84
SFSWAP-205ENST00000537164 NPLOC4Q8TAT6 608 aa20.32■□□□□ 0.84
SFSWAP-205ENST00000537164 TTC14Q96N46 770 aa20.32■□□□□ 0.84
SFSWAP-205ENST00000537164 SLC38A10Q9HBR0 1119 aa20.32■□□□□ 0.84
SFSWAP-205ENST00000537164 FLRT1Q9NZU1 646 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms