RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 TOP1P11387 765 aaKnown RBP21.06■□□□□ 0.96
DDX55-204ENST00000536079 SEC23AQ15436 765 aa21.06■□□□□ 0.96
DDX55-204ENST00000536079 ANKS1AQ92625 1134 aa21.06■□□□□ 0.96
DDX55-204ENST00000536079 TTC14Q96N46 770 aa21.06■□□□□ 0.96
DDX55-204ENST00000536079 EFCC1Q9HA90 598 aa21.06■□□□□ 0.96
DDX55-204ENST00000536079 HTTP42858 3142 aa21.06■□□□□ 0.96
DDX55-204ENST00000536079 TNKSO95271 1327 aa21.05■□□□□ 0.96
DDX55-204ENST00000536079 ERVK-9P63128 1117 aa21.05■□□□□ 0.96
DDX55-204ENST00000536079 ERVK-24P63145 666 aa21.05■□□□□ 0.96
DDX55-204ENST00000536079 KCTD1Q719H9 257 aa21.05■□□□□ 0.96
DDX55-204ENST00000536079 DGKHQ86XP1 1220 aa21.05■□□□□ 0.96
DDX55-204ENST00000536079 GPRC5AQ8NFJ5 357 aa21.05■□□□□ 0.96
DDX55-204ENST00000536079 NCOA7Q8NI08 942 aa21.05■□□□□ 0.96
DDX55-204ENST00000536079 GMCL1Q96IK5 515 aa21.05■□□□□ 0.96
DDX55-204ENST00000536079 PORCNQ9H237 461 aa21.05■□□□□ 0.96
DDX55-204ENST00000536079 GPHNQ9NQX3 736 aaPredicted RBP21.05■□□□□ 0.96
DDX55-204ENST00000536079 HOXC10Q9NYD6 342 aa21.05■□□□□ 0.96
DDX55-204ENST00000536079 PPP1R9AQ9ULJ8 1098 aa21.05■□□□□ 0.96
DDX55-204ENST00000536079 ADAMTS5Q9UNA0 930 aa21.05■□□□□ 0.96
DDX55-204ENST00000536079 RABGAP1Q9Y3P9 1069 aa21.05■□□□□ 0.96
DDX55-204ENST00000536079 GTF3C3Q9Y5Q9 886 aa21.05■□□□□ 0.96
DDX55-204ENST00000536079 ADCK5Q3MIX3 580 aa21.04■□□□□ 0.96
DDX55-204ENST00000536079 PPP4R3BQ5MIZ7 849 aa21.04■□□□□ 0.96
DDX55-204ENST00000536079 TTBK2Q6IQ55 1244 aa21.04■□□□□ 0.96
DDX55-204ENST00000536079 REPS2Q8NFH8 660 aa21.04■□□□□ 0.96
DDX55-204ENST00000536079 FMNL1O95466 1100 aaPredicted RBP21.03■□□□□ 0.96
DDX55-204ENST00000536079 BMP3P12645 472 aa21.03■□□□□ 0.96
DDX55-204ENST00000536079 SLC1A4P43007 532 aa21.03■□□□□ 0.96
DDX55-204ENST00000536079 TRDNQ13061 729 aa21.03■□□□□ 0.96
DDX55-204ENST00000536079 TMEM132BQ14DG7 1078 aa21.03■□□□□ 0.96
DDX55-204ENST00000536079 IQCA1Q86XH1 822 aa21.03■□□□□ 0.96
DDX55-204ENST00000536079 TNS4Q8IZW8 715 aa21.03■□□□□ 0.96
DDX55-204ENST00000536079 KCNB2Q92953 911 aa21.03■□□□□ 0.96
DDX55-204ENST00000536079 GABRQQ9UN88 632 aa21.03■□□□□ 0.96
DDX55-204ENST00000536079 PARP14Q460N5 1801 aa21.02■□□□□ 0.96
DDX55-204ENST00000536079 TMEM232C9JQI7 657 aa21.02■□□□□ 0.96
DDX55-204ENST00000536079 VWA5AO00534 786 aa21.02■□□□□ 0.96
DDX55-204ENST00000536079 NT5C2P49902 561 aa21.02■□□□□ 0.96
DDX55-204ENST00000536079 KIF22Q14807 665 aa21.02■□□□□ 0.96
DDX55-204ENST00000536079 RALYLQ86SE5 291 aaKnown RBP21.02■□□□□ 0.96
DDX55-204ENST00000536079 IGDCC4Q8TDY8 1250 aa21.02■□□□□ 0.96
DDX55-204ENST00000536079 GTF3C2Q8WUA4 911 aaPredicted RBP21.02■□□□□ 0.96
DDX55-204ENST00000536079 SLF1Q9BQI6 1058 aa21.02■□□□□ 0.96
DDX55-204ENST00000536079 UBAC1Q9BSL1 405 aa21.02■□□□□ 0.96
DDX55-204ENST00000536079 PTPN22Q9Y2R2 807 aa21.02■□□□□ 0.96
DDX55-204ENST00000536079 FRMPD2Q68DX3 1309 aaPredicted RBP21.02■□□□□ 0.95
DDX55-204ENST00000536079 MYPNQ86TC9 1320 aa21.02■□□□□ 0.95
DDX55-204ENST00000536079 SNHG28P0DPA3 235 aa21.01■□□□□ 0.95
DDX55-204ENST00000536079 PDHBP11177 359 aa21.01■□□□□ 0.95
DDX55-204ENST00000536079 HSPA4P34932 840 aa21.01■□□□□ 0.95
DDX55-204ENST00000536079 FCGRTP55899 365 aa21.01■□□□□ 0.95
DDX55-204ENST00000536079 SNAP25P60880 206 aa21.01■□□□□ 0.95
DDX55-204ENST00000536079 PRKCZQ05513 592 aa21.01■□□□□ 0.95
DDX55-204ENST00000536079 KIFC2Q96AC6 838 aa21.01■□□□□ 0.95
DDX55-204ENST00000536079 USP26Q9BXU7 913 aa21.01■□□□□ 0.95
DDX55-204ENST00000536079 PTCH2Q9Y6C5 1203 aa21.01■□□□□ 0.95
DDX55-204ENST00000536079 A0A0G2JMZ2 1700 aa21.01■□□□□ 0.95
DDX55-204ENST00000536079 IFIT3O14879 490 aaKnown RBP21■□□□□ 0.95
DDX55-204ENST00000536079 SEC24BO95487 1268 aa21■□□□□ 0.95
DDX55-204ENST00000536079 SLC16A2P36021 539 aa21■□□□□ 0.95
DDX55-204ENST00000536079 TSGA10IPQ3SY00 556 aa21■□□□□ 0.95
DDX55-204ENST00000536079 CCDC178Q5BJE1 867 aa21■□□□□ 0.95
DDX55-204ENST00000536079 PNMA1Q8ND90 353 aa21■□□□□ 0.95
DDX55-204ENST00000536079 DCAF4Q8WV16 495 aa21■□□□□ 0.95
DDX55-204ENST00000536079 MOV10L1Q9BXT6 1211 aaKnown RBP21■□□□□ 0.95
DDX55-204ENST00000536079 LRRC2Q9BYS8 371 aa21■□□□□ 0.95
DDX55-204ENST00000536079 GPCPD1Q9NPB8 672 aa21■□□□□ 0.95
DDX55-204ENST00000536079 SRRDQ9UH36 339 aa21■□□□□ 0.95
DDX55-204ENST00000536079 FEM1BQ9UK73 627 aa21■□□□□ 0.95
DDX55-204ENST00000536079 ISY1Q9ULR0 285 aaKnown RBP21■□□□□ 0.95
DDX55-204ENST00000536079 SNX14Q9Y5W7 946 aa21■□□□□ 0.95
DDX55-204ENST00000536079 TNPO2O14787 897 aaKnown RBP20.99■□□□□ 0.95
DDX55-204ENST00000536079 PRC1O43663 620 aa20.99■□□□□ 0.95
DDX55-204ENST00000536079 REC8O95072 547 aa20.99■□□□□ 0.95
DDX55-204ENST00000536079 GOLGA8HP0CJ92 632 aa20.99■□□□□ 0.95
DDX55-204ENST00000536079 CCDC96Q2M329 555 aa20.99■□□□□ 0.95
DDX55-204ENST00000536079 IFIT1BQ5T764 474 aaKnown RBP20.99■□□□□ 0.95
DDX55-204ENST00000536079 PRPF38AQ8NAV1 312 aaKnown RBP20.99■□□□□ 0.95
DDX55-204ENST00000536079 TCEANC2Q96MN5 208 aa20.99■□□□□ 0.95
DDX55-204ENST00000536079 SPATC1LQ9H0A9 340 aa20.99■□□□□ 0.95
DDX55-204ENST00000536079 CPVLQ9H3G5 476 aa20.99■□□□□ 0.95
DDX55-204ENST00000536079 KAT14Q9H8E8 782 aa20.99■□□□□ 0.95
DDX55-204ENST00000536079 GJD2Q9UKL4 321 aa20.99■□□□□ 0.95
DDX55-204ENST00000536079 ZNF214Q9UL59 606 aaPredicted RBP20.99■□□□□ 0.95
DDX55-204ENST00000536079 CPA1P15085 419 aa20.98■□□□□ 0.95
DDX55-204ENST00000536079 ZNF543Q08ER8 600 aa20.98■□□□□ 0.95
DDX55-204ENST00000536079 PLS1Q14651 629 aa20.98■□□□□ 0.95
DDX55-204ENST00000536079 RNF20Q5VTR2 975 aa20.98■□□□□ 0.95
DDX55-204ENST00000536079 FBXO46Q6PJ61 603 aaPredicted RBP20.98■□□□□ 0.95
DDX55-204ENST00000536079 LY9Q9HBG7 655 aa20.98■□□□□ 0.95
DDX55-204ENST00000536079 HPS5Q9UPZ3 1129 aa20.98■□□□□ 0.95
DDX55-204ENST00000536079 RIPK3Q9Y572 518 aa20.98■□□□□ 0.95
DDX55-204ENST00000536079 MGAMO43451 1857 aa20.97■□□□□ 0.95
DDX55-204ENST00000536079 TAL1P17542 331 aaPredicted RBP20.97■□□□□ 0.95
DDX55-204ENST00000536079 FLT3LGP49771 235 aa20.97■□□□□ 0.95
DDX55-204ENST00000536079 STAT2P52630 851 aa20.97■□□□□ 0.95
DDX55-204ENST00000536079 EXOSC10Q01780 885 aaKnown RBP20.97■□□□□ 0.95
DDX55-204ENST00000536079 PKN2Q16513 984 aaKnown RBP20.97■□□□□ 0.95
DDX55-204ENST00000536079 TMEM67Q5HYA8 995 aa20.97■□□□□ 0.95
DDX55-204ENST00000536079 GPR142Q7Z601 462 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms