RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 MFSD14CQ5VZR4 134 aa10.18□□□□□ -0.78
SFSWAP-202ENST00000535202 CCDC129Q6ZRS4 1044 aa10.18□□□□□ -0.78
SFSWAP-202ENST00000535202 NECAB2Q7Z6G3 386 aa10.18□□□□□ -0.78
SFSWAP-202ENST00000535202 NCAPG2Q86XI2 1143 aa10.18□□□□□ -0.78
SFSWAP-202ENST00000535202 ZNF444Q8N0Y2 327 aaPredicted RBP10.18□□□□□ -0.78
SFSWAP-202ENST00000535202 MB21D1Q8N884 522 aa10.18□□□□□ -0.78
SFSWAP-202ENST00000535202 ANKLE1Q8NAG6 615 aa10.18□□□□□ -0.78
SFSWAP-202ENST00000535202 NPLOC4Q8TAT6 608 aa10.18□□□□□ -0.78
SFSWAP-202ENST00000535202 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.18□□□□□ -0.78
SFSWAP-202ENST00000535202 NAPBQ9H115 298 aa10.18□□□□□ -0.78
SFSWAP-202ENST00000535202 FBXO28Q9NVF7 368 aa10.18□□□□□ -0.78
SFSWAP-202ENST00000535202 FLRT1Q9NZU1 646 aa10.18□□□□□ -0.78
SFSWAP-202ENST00000535202 ZNF236Q9UL36 1845 aa10.18□□□□□ -0.78
SFSWAP-202ENST00000535202 EVI5O60447 810 aa10.17□□□□□ -0.78
SFSWAP-202ENST00000535202 ADORA2AP29274 412 aa10.17□□□□□ -0.78
SFSWAP-202ENST00000535202 PDE1AP54750 535 aa10.17□□□□□ -0.78
SFSWAP-202ENST00000535202 NBR1Q14596 966 aa10.17□□□□□ -0.78
SFSWAP-202ENST00000535202 CHRDL2Q6WN34 429 aa10.17□□□□□ -0.78
SFSWAP-202ENST00000535202 DPP9Q86TI2 863 aa10.17□□□□□ -0.78
SFSWAP-202ENST00000535202 SHCBP1Q8NEM2 672 aa10.17□□□□□ -0.78
SFSWAP-202ENST00000535202 EVI5LQ96CN4 794 aa10.17□□□□□ -0.78
SFSWAP-202ENST00000535202 NUP88Q99567 741 aaPredicted RBP10.17□□□□□ -0.78
SFSWAP-202ENST00000535202 LNPKQ9C0E8 428 aa10.17□□□□□ -0.78
SFSWAP-202ENST00000535202 ZNF287Q9HBT7 754 aa10.17□□□□□ -0.78
SFSWAP-202ENST00000535202 NYAP2Q9P242 653 aa10.17□□□□□ -0.78
SFSWAP-202ENST00000535202 OGDHLQ9ULD0 1010 aa10.17□□□□□ -0.78
SFSWAP-202ENST00000535202 COLQQ9Y215 455 aaPredicted RBP10.17□□□□□ -0.78
SFSWAP-202ENST00000535202 NR2E3Q9Y5X4 410 aa10.17□□□□□ -0.78
SFSWAP-202ENST00000535202 ZNFX1Q9P2E3 1918 aaKnown RBP10.16□□□□□ -0.78
SFSWAP-202ENST00000535202 NDUFB10O96000 172 aa10.16□□□□□ -0.78
SFSWAP-202ENST00000535202 SLC3A2P08195 630 aaKnown RBP10.16□□□□□ -0.78
SFSWAP-202ENST00000535202 HOXC6P09630 235 aa10.16□□□□□ -0.78
SFSWAP-202ENST00000535202 CNGA1P29973 690 aa10.16□□□□□ -0.78
SFSWAP-202ENST00000535202 PDE4BQ07343 736 aa10.16□□□□□ -0.78
SFSWAP-202ENST00000535202 PPARAQ07869 468 aa10.16□□□□□ -0.78
SFSWAP-202ENST00000535202 AAMPQ13685 434 aa10.16□□□□□ -0.78
SFSWAP-202ENST00000535202 TMEM132BQ14DG7 1078 aa10.16□□□□□ -0.78
SFSWAP-202ENST00000535202 B4GALNT3Q6L9W6 998 aa10.16□□□□□ -0.78
SFSWAP-202ENST00000535202 NBPF3Q9H094 633 aa10.16□□□□□ -0.78
SFSWAP-202ENST00000535202 MROH8Q9H579 483 aa10.16□□□□□ -0.78
SFSWAP-202ENST00000535202 C11orf49Q9H6J7 331 aa10.16□□□□□ -0.78
SFSWAP-202ENST00000535202 CLIP2Q9UDT6 1046 aa10.16□□□□□ -0.78
SFSWAP-202ENST00000535202 STAP2Q9UGK3 403 aa10.16□□□□□ -0.78
SFSWAP-202ENST00000535202 PPP1R9AQ9ULJ8 1098 aa10.16□□□□□ -0.78
SFSWAP-202ENST00000535202 IGKV6D-41A0A0C4DH26 115 aa10.15□□□□□ -0.78
SFSWAP-202ENST00000535202 F5H6K3 240 aa10.15□□□□□ -0.78
SFSWAP-202ENST00000535202 VWA5AO00534 786 aa10.15□□□□□ -0.78
SFSWAP-202ENST00000535202 STRNO43815 780 aa10.15□□□□□ -0.78
SFSWAP-202ENST00000535202 COBLO75128 1261 aa10.15□□□□□ -0.78
SFSWAP-202ENST00000535202 SLC25A27O95847 323 aa10.15□□□□□ -0.78
SFSWAP-202ENST00000535202 TSPY3P0CV98 308 aa10.15□□□□□ -0.78
SFSWAP-202ENST00000535202 TSPY8P0CW00 308 aa10.15□□□□□ -0.78
SFSWAP-202ENST00000535202 CYP2C19P33261 490 aa10.15□□□□□ -0.78
SFSWAP-202ENST00000535202 MNX1P50219 401 aaPredicted RBP10.15□□□□□ -0.78
SFSWAP-202ENST00000535202 KLRC3Q07444 240 aa10.15□□□□□ -0.78
SFSWAP-202ENST00000535202 FAM47AQ5JRC9 791 aa10.15□□□□□ -0.78
SFSWAP-202ENST00000535202 C7orf61Q8IZ16 206 aa10.15□□□□□ -0.78
SFSWAP-202ENST00000535202 LRRC47Q8N1G4 583 aaKnown RBP10.15□□□□□ -0.78
SFSWAP-202ENST00000535202 EXOC6Q8TAG9 804 aa10.15□□□□□ -0.78
SFSWAP-202ENST00000535202 CEP95Q96GE4 821 aa10.15□□□□□ -0.78
SFSWAP-202ENST00000535202 SLF1Q9BQI6 1058 aa10.15□□□□□ -0.78
SFSWAP-202ENST00000535202 RWDD1Q9H446 243 aaPredicted RBP10.15□□□□□ -0.78
SFSWAP-202ENST00000535202 SLC5A4Q9NY91 659 aa10.15□□□□□ -0.78
SFSWAP-202ENST00000535202 ADAMTS5Q9UNA0 930 aa10.15□□□□□ -0.78
SFSWAP-202ENST00000535202 PLXNA1Q9UIW2 1896 aa10.15□□□□□ -0.79
SFSWAP-202ENST00000535202 PLIN4Q96Q06 1357 aa10.14□□□□□ -0.79
SFSWAP-202ENST00000535202 TRIM6-TRIM34B2RNG4 842 aa10.14□□□□□ -0.79
SFSWAP-202ENST00000535202 FOXP2O15409 715 aa10.14□□□□□ -0.79
SFSWAP-202ENST00000535202 TTLL1O95922 423 aa10.14□□□□□ -0.79
SFSWAP-202ENST00000535202 FCER1AP12319 257 aa10.14□□□□□ -0.79
SFSWAP-202ENST00000535202 STAT3P40763 770 aa10.14□□□□□ -0.79
SFSWAP-202ENST00000535202 TFAP4Q01664 338 aa10.14□□□□□ -0.79
SFSWAP-202ENST00000535202 CTDSPL2Q05D32 466 aa10.14□□□□□ -0.79
SFSWAP-202ENST00000535202 VPS53Q5VIR6 699 aa10.14□□□□□ -0.79
SFSWAP-202ENST00000535202 OLFML2BQ68BL8 750 aa10.14□□□□□ -0.79
SFSWAP-202ENST00000535202 LHX8Q68G74 356 aa10.14□□□□□ -0.79
SFSWAP-202ENST00000535202 RIOX2Q8IUF8 465 aa10.14□□□□□ -0.79
SFSWAP-202ENST00000535202 NEDD1Q8NHV4 660 aa10.14□□□□□ -0.79
SFSWAP-202ENST00000535202 RILPL2Q969X0 211 aa10.14□□□□□ -0.79
SFSWAP-202ENST00000535202 MMP19Q99542 508 aa10.14□□□□□ -0.79
SFSWAP-202ENST00000535202 HELLSQ9NRZ9 838 aa10.14□□□□□ -0.79
SFSWAP-202ENST00000535202 MTMR4Q9NYA4 1195 aa10.14□□□□□ -0.79
SFSWAP-202ENST00000535202 DDX20Q9UHI6 824 aaKnown RBP10.14□□□□□ -0.79
SFSWAP-202ENST00000535202 ISY1Q9ULR0 285 aaKnown RBP10.14□□□□□ -0.79
SFSWAP-202ENST00000535202 PFASO15067 1338 aa10.13□□□□□ -0.79
SFSWAP-202ENST00000535202 A0A0D9SFI3 127 aa10.13□□□□□ -0.79
SFSWAP-202ENST00000535202 TSPY2A6NKD2 308 aa10.13□□□□□ -0.79
SFSWAP-202ENST00000535202 MSCO60682 206 aa10.13□□□□□ -0.79
SFSWAP-202ENST00000535202 IGHDP01880 384 aa10.13□□□□□ -0.79
SFSWAP-202ENST00000535202 CYBAP13498 195 aa10.13□□□□□ -0.79
SFSWAP-202ENST00000535202 COPB2P35606 906 aa10.13□□□□□ -0.79
SFSWAP-202ENST00000535202 SLC4A3P48751 1232 aa10.13□□□□□ -0.79
SFSWAP-202ENST00000535202 KCTD2Q14681 263 aa10.13□□□□□ -0.79
SFSWAP-202ENST00000535202 SLFN13Q68D06 897 aa10.13□□□□□ -0.79
SFSWAP-202ENST00000535202 SMC5Q8IY18 1101 aa10.13□□□□□ -0.79
SFSWAP-202ENST00000535202 ABRAQ8N0Z2 381 aa10.13□□□□□ -0.79
SFSWAP-202ENST00000535202 TRPV1Q8NER1 839 aa10.13□□□□□ -0.79
SFSWAP-202ENST00000535202 REPS2Q8NFH8 660 aa10.13□□□□□ -0.79
SFSWAP-202ENST00000535202 KIFC2Q96AC6 838 aa10.13□□□□□ -0.79
SFSWAP-202ENST00000535202 CHMP4CQ96CF2 233 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms