RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 ABRAQ8N0Z2 381 aa27.42■■□□□ 1.98
PKP3-210ENST00000533249 FCER1AP12319 257 aa27.41■■□□□ 1.98
PKP3-210ENST00000533249 STK11IPQ8N1F8 1099 aa27.41■■□□□ 1.98
PKP3-210ENST00000533249 ARRDC4Q8NCT1 418 aa27.41■■□□□ 1.98
PKP3-210ENST00000533249 GOPCQ9HD26 462 aa27.41■■□□□ 1.98
PKP3-210ENST00000533249 ARPP21Q9UBL0 812 aaPredicted RBP27.41■■□□□ 1.98
PKP3-210ENST00000533249 SEPT4O43236 478 aa27.4■■□□□ 1.98
PKP3-210ENST00000533249 SLC25A27O95847 323 aa27.4■■□□□ 1.98
PKP3-210ENST00000533249 DEFB123Q8N688 67 aa27.4■■□□□ 1.98
PKP3-210ENST00000533249 MAML3Q96JK9 1138 aa27.4■■□□□ 1.98
PKP3-210ENST00000533249 STRBPQ96SI9 672 aaKnown RBP27.4■■□□□ 1.98
PKP3-210ENST00000533249 ZNFX1Q9P2E3 1918 aaKnown RBP27.39■■□□□ 1.98
PKP3-210ENST00000533249 KBTBD13C9JR72 458 aa27.39■■□□□ 1.98
PKP3-210ENST00000533249 RTP1P59025 263 aa27.39■■□□□ 1.98
PKP3-210ENST00000533249 FAM83BQ5T0W9 1011 aa27.39■■□□□ 1.98
PKP3-210ENST00000533249 TSHZ3Q63HK5 1081 aa27.39■■□□□ 1.98
PKP3-210ENST00000533249 GPR153Q6NV75 609 aa27.39■■□□□ 1.98
PKP3-210ENST00000533249 Q7L0L9 218 aa27.39■■□□□ 1.98
PKP3-210ENST00000533249 LBHD1Q9BQE6 289 aaPredicted RBP27.39■■□□□ 1.98
PKP3-210ENST00000533249 KBTBD3Q8NAB2 608 aa27.38■■□□□ 1.97
PKP3-210ENST00000533249 MMP19Q99542 508 aa27.38■■□□□ 1.97
PKP3-210ENST00000533249 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.38■■□□□ 1.97
PKP3-210ENST00000533249 PPP1R9AQ9ULJ8 1098 aa27.38■■□□□ 1.97
PKP3-210ENST00000533249 ADAMTS5Q9UNA0 930 aa27.38■■□□□ 1.97
PKP3-210ENST00000533249 ATP11BQ9Y2G3 1177 aa27.38■■□□□ 1.97
PKP3-210ENST00000533249 MINDY4BA8MYZ0 360 aa27.37■■□□□ 1.97
PKP3-210ENST00000533249 RIOX2Q8IUF8 465 aa27.37■■□□□ 1.97
PKP3-210ENST00000533249 SLC17A8Q8NDX2 589 aa27.37■■□□□ 1.97
PKP3-210ENST00000533249 GPATCH3Q96I76 525 aa27.37■■□□□ 1.97
PKP3-210ENST00000533249 PRKAG2Q9UGJ0 569 aa27.37■■□□□ 1.97
PKP3-210ENST00000533249 GSG1L2A8MUP6 293 aa27.36■■□□□ 1.97
PKP3-210ENST00000533249 VWA5AO00534 786 aa27.36■■□□□ 1.97
PKP3-210ENST00000533249 PGK2P07205 417 aa27.36■■□□□ 1.97
PKP3-210ENST00000533249 RASA1P20936 1047 aa27.36■■□□□ 1.97
PKP3-210ENST00000533249 STAT3P40763 770 aa27.36■■□□□ 1.97
PKP3-210ENST00000533249 SBK1Q52WX2 424 aa27.36■■□□□ 1.97
PKP3-210ENST00000533249 APPBP2Q92624 585 aa27.36■■□□□ 1.97
PKP3-210ENST00000533249 OSBP2Q969R2 916 aa27.36■■□□□ 1.97
PKP3-210ENST00000533249 MKNK2Q9HBH9 465 aa27.36■■□□□ 1.97
PKP3-210ENST00000533249 KCTD2Q14681 263 aa27.35■■□□□ 1.97
PKP3-210ENST00000533249 NUP88Q99567 741 aaPredicted RBP27.35■■□□□ 1.97
PKP3-210ENST00000533249 DCTPP1Q9H773 170 aa27.35■■□□□ 1.97
PKP3-210ENST00000533249 GREB1LQ9C091 1923 aaPredicted RBP27.35■■□□□ 1.97
PKP3-210ENST00000533249 DNAH12Q6ZR08 3092 aa27.35■■□□□ 1.97
PKP3-210ENST00000533249 FAM47AQ5JRC9 791 aa27.34■■□□□ 1.97
PKP3-210ENST00000533249 SLC39A5Q6ZMH5 540 aa27.34■■□□□ 1.97
PKP3-210ENST00000533249 ZNF214Q9UL59 606 aaPredicted RBP27.34■■□□□ 1.97
PKP3-210ENST00000533249 RNF113AO15541 343 aaKnown RBP27.33■■□□□ 1.97
PKP3-210ENST00000533249 ADCYAP1R1P41586 468 aa27.33■■□□□ 1.97
PKP3-210ENST00000533249 LRRC41Q15345 812 aa27.33■■□□□ 1.97
PKP3-210ENST00000533249 GIMAP6Q6P9H5 292 aa27.33■■□□□ 1.97
PKP3-210ENST00000533249 REPS2Q8NFH8 660 aa27.33■■□□□ 1.97
PKP3-210ENST00000533249 FERMT2Q96AC1 680 aa27.33■■□□□ 1.97
PKP3-210ENST00000533249 PLXNA1Q9UIW2 1896 aa27.33■■□□□ 1.97
PKP3-210ENST00000533249 GPAA1O43292 621 aa27.32■■□□□ 1.96
PKP3-210ENST00000533249 TDO2P48775 406 aa27.32■■□□□ 1.96
PKP3-210ENST00000533249 SLF1Q9BQI6 1058 aa27.32■■□□□ 1.96
PKP3-210ENST00000533249 EPB41L4AQ9HCS5 686 aaPredicted RBP27.32■■□□□ 1.96
PKP3-210ENST00000533249 PRDM5Q9NQX1 630 aaPredicted RBP27.32■■□□□ 1.96
PKP3-210ENST00000533249 NYAP2Q9P242 653 aa27.32■■□□□ 1.96
PKP3-210ENST00000533249 ROBO3Q96MS0 1386 aa27.32■■□□□ 1.96
PKP3-210ENST00000533249 SMCHD1A6NHR9 2005 aa27.31■■□□□ 1.96
PKP3-210ENST00000533249 APPP05067 770 aa27.31■■□□□ 1.96
PKP3-210ENST00000533249 ZNF792Q3KQV3 632 aa27.31■■□□□ 1.96
PKP3-210ENST00000533249 TRIM60Q495X7 471 aa27.31■■□□□ 1.96
PKP3-210ENST00000533249 TINF2Q9BSI4 451 aa27.31■■□□□ 1.96
PKP3-210ENST00000533249 LTBP2Q14767 1821 aa27.3■■□□□ 1.96
PKP3-210ENST00000533249 F5H6K3 240 aa27.3■■□□□ 1.96
PKP3-210ENST00000533249 M0R2C6 588 aa27.3■■□□□ 1.96
PKP3-210ENST00000533249 NDUFB10O96000 172 aa27.3■■□□□ 1.96
PKP3-210ENST00000533249 ZFYP08048 801 aaPredicted RBP27.3■■□□□ 1.96
PKP3-210ENST00000533249 COPB2P35606 906 aa27.3■■□□□ 1.96
PKP3-210ENST00000533249 KLRC3Q07444 240 aa27.3■■□□□ 1.96
PKP3-210ENST00000533249 XPNPEP3Q9NQH7 507 aa27.3■■□□□ 1.96
PKP3-210ENST00000533249 MTMR10Q9NXD2 777 aa27.3■■□□□ 1.96
PKP3-210ENST00000533249 CLIP2Q9UDT6 1046 aa27.3■■□□□ 1.96
PKP3-210ENST00000533249 NRBP1Q9UHY1 535 aa27.3■■□□□ 1.96
PKP3-210ENST00000533249 PRDM1O75626 825 aa27.29■■□□□ 1.96
PKP3-210ENST00000533249 RARBP10826 455 aa27.29■■□□□ 1.96
PKP3-210ENST00000533249 TAL1P17542 331 aaPredicted RBP27.29■■□□□ 1.96
PKP3-210ENST00000533249 SLC4A3P48751 1232 aa27.29■■□□□ 1.96
PKP3-210ENST00000533249 SNRNP48Q6IEG0 339 aaKnown RBP27.29■■□□□ 1.96
PKP3-210ENST00000533249 DIS3Q9Y2L1 958 aaKnown RBP27.29■■□□□ 1.96
PKP3-210ENST00000533249 COL6A3P12111 3177 aa27.28■■□□□ 1.96
PKP3-210ENST00000533249 GNAT2P19087 354 aa27.28■■□□□ 1.96
PKP3-210ENST00000533249 ZNF444Q8N0Y2 327 aaPredicted RBP27.28■■□□□ 1.96
PKP3-210ENST00000533249 TEX13BQ9BXU2 312 aa27.28■■□□□ 1.96
PKP3-210ENST00000533249 MYH4Q9Y623 1939 aa27.28■■□□□ 1.96
PKP3-210ENST00000533249 PGK1P00558 417 aa27.27■■□□□ 1.96
PKP3-210ENST00000533249 SNX17Q15036 470 aa27.27■■□□□ 1.96
PKP3-210ENST00000533249 IGKV6D-41A0A0C4DH26 115 aa27.26■■□□□ 1.95
PKP3-210ENST00000533249 CPXCR1Q8N123 301 aa27.26■■□□□ 1.95
PKP3-210ENST00000533249 PRPF38AQ8NAV1 312 aaKnown RBP27.26■■□□□ 1.95
PKP3-210ENST00000533249 LENG1Q96BZ8 264 aaPredicted RBP27.26■■□□□ 1.95
PKP3-210ENST00000533249 DDX11Q96FC9 970 aa27.26■■□□□ 1.95
PKP3-210ENST00000533249 ZNF287Q9HBT7 754 aa27.26■■□□□ 1.95
PKP3-210ENST00000533249 CNPY2Q9Y2B0 182 aa27.26■■□□□ 1.95
PKP3-210ENST00000533249 STXBP5LQ9Y2K9 1186 aa27.26■■□□□ 1.95
PKP3-210ENST00000533249 RIPK3Q9Y572 518 aa27.26■■□□□ 1.95
PKP3-210ENST00000533249 CTDP1Q9Y5B0 961 aaPredicted RBP27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms