RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 TINF2Q9BSI4 451 aa15.08■□□□□ 0
CAPN1-223ENST00000533079 CRNKL1Q9BZJ0 848 aaKnown RBP15.08■□□□□ 0
CAPN1-223ENST00000533079 ADAMTS4O75173 837 aa15.07■□□□□ 0
CAPN1-223ENST00000533079 FAAP100Q0VG06 881 aa15.07■□□□□ 0
CAPN1-223ENST00000533079 PPIGQ13427 754 aaKnown RBP eCLIP15.07■□□□□ 05e-9■■□□□ 14.4
CAPN1-223ENST00000533079 KCTD2Q14681 263 aa15.07■□□□□ 0
CAPN1-223ENST00000533079 SLC44A5Q8NCS7 719 aa15.07■□□□□ 0
CAPN1-223ENST00000533079 ATG4CQ96DT6 458 aa15.07■□□□□ 0
CAPN1-223ENST00000533079 MMP19Q99542 508 aa15.07■□□□□ 0
CAPN1-223ENST00000533079 STARD7Q9NQZ5 370 aa15.07■□□□□ 0
CAPN1-223ENST00000533079 NOP58Q9Y2X3 529 aaKnown RBP15.07■□□□□ 0
CAPN1-223ENST00000533079 TMX2Q9Y320 296 aa15.07■□□□□ 0
CAPN1-223ENST00000533079 PLXNA1Q9UIW2 1896 aa15.07■□□□□ 0
CAPN1-223ENST00000533079 MYH8P13535 1937 aa15.06■□□□□ 0
CAPN1-223ENST00000533079 SURF6O75683 361 aaKnown RBP15.06■□□□□ 0
CAPN1-223ENST00000533079 PGK1P00558 417 aa15.06■□□□□ 0
CAPN1-223ENST00000533079 TIMP1P01033 207 aa15.06■□□□□ 0
CAPN1-223ENST00000533079 ICA1Q05084 483 aa15.06■□□□□ 0
CAPN1-223ENST00000533079 TTF1Q15361 905 aaPredicted RBP15.06■□□□□ 0
CAPN1-223ENST00000533079 MFSD5Q6N075 450 aa15.06■□□□□ 0
CAPN1-223ENST00000533079 RIOX2Q8IUF8 465 aa15.06■□□□□ 0
CAPN1-223ENST00000533079 ASB2Q96Q27 587 aa15.06■□□□□ 0
CAPN1-223ENST00000533079 VCPKMTQ9H867 229 aa15.06■□□□□ 0
CAPN1-223ENST00000533079 MCM9Q9NXL9 1143 aa15.06■□□□□ 0
CAPN1-223ENST00000533079 TLR7Q9NYK1 1049 aaKnown RBP15.06■□□□□ 0
CAPN1-223ENST00000533079 CNPY2Q9Y2B0 182 aa15.06■□□□□ 0
CAPN1-223ENST00000533079 XIRP2A4UGR9 3374 aa15.06■□□□□ 0
CAPN1-223ENST00000533079 TTC28Q96AY4 2481 aa15.05■□□□□ 0
CAPN1-223ENST00000533079 MAGEB6P1A0A0J9YX57 407 aa15.05■□□□□ -0
CAPN1-223ENST00000533079 PLA2G5P39877 138 aa15.05■□□□□ -0
CAPN1-223ENST00000533079 ACLYP53396 1101 aa15.05■□□□□ -0
CAPN1-223ENST00000533079 TMEM132BQ14DG7 1078 aa15.05■□□□□ -0
CAPN1-223ENST00000533079 ZNF792Q3KQV3 632 aa15.05■□□□□ -0
CAPN1-223ENST00000533079 RASIP1Q5U651 963 aa15.05■□□□□ -0
CAPN1-223ENST00000533079 PSRC1Q6PGN9 363 aaPredicted RBP15.05■□□□□ -0
CAPN1-223ENST00000533079 TBX21Q9UL17 535 aa15.05■□□□□ -0
CAPN1-223ENST00000533079 ADAMTS5Q9UNA0 930 aa15.05■□□□□ -0
CAPN1-223ENST00000533079 SYNGAP1Q96PV0 1343 aa15.05■□□□□ -0
CAPN1-223ENST00000533079 SYNRGQ9UMZ2 1314 aa15.05■□□□□ -0
CAPN1-223ENST00000533079 COL11A1P12107 1806 aaPredicted RBP15.05■□□□□ -0
CAPN1-223ENST00000533079 ELP1O95163 1332 aa15.04■□□□□ -0
CAPN1-223ENST00000533079 ZNF865P0CJ78 1059 aaPredicted RBP15.04■□□□□ -0
CAPN1-223ENST00000533079 CST5P28325 142 aaPredicted RBP15.04■□□□□ -0
CAPN1-223ENST00000533079 MRPS5P82675 430 aaKnown RBP15.04■□□□□ -0
CAPN1-223ENST00000533079 ATP8B2P98198 1209 aa15.04■□□□□ -0
CAPN1-223ENST00000533079 RAB30Q15771 203 aa15.04■□□□□ -0
CAPN1-223ENST00000533079 IL27Q8NEV9 243 aa15.04■□□□□ -0
CAPN1-223ENST00000533079 ADAMTS19Q8TE59 1207 aa15.04■□□□□ -0
CAPN1-223ENST00000533079 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.04■□□□□ -08e-8■■□□□ 14.5
CAPN1-223ENST00000533079 PBX4Q9BYU1 374 aa15.04■□□□□ -0
CAPN1-223ENST00000533079 CHD9Q3L8U1 2897 aa15.03■□□□□ -0
CAPN1-223ENST00000533079 KIAA1755Q5JYT7 1200 aa15.03■□□□□ -0
CAPN1-223ENST00000533079 TMEM199Q8N511 208 aa15.03■□□□□ -0
CAPN1-223ENST00000533079 KLHDC9Q8NEP7 349 aa15.03■□□□□ -0
CAPN1-223ENST00000533079 EAF2Q96CJ1 260 aaPredicted RBP15.03■□□□□ -0
CAPN1-223ENST00000533079 CCDC17Q96LX7 622 aa15.03■□□□□ -0
CAPN1-223ENST00000533079 GLT1D1Q96MS3 346 aa15.03■□□□□ -0
CAPN1-223ENST00000533079 UHRF1Q96T88 793 aaPredicted RBP15.03■□□□□ -0
CAPN1-223ENST00000533079 CCDC8Q9H0W5 538 aaPredicted RBP15.03■□□□□ -0
CAPN1-223ENST00000533079 MTIF3Q9H2K0 278 aaKnown RBP15.03■□□□□ -0
CAPN1-223ENST00000533079 ANTXR1Q9H6X2 564 aa15.03■□□□□ -0
CAPN1-223ENST00000533079 DCP1AQ9NPI6 582 aaPredicted RBP15.03■□□□□ -0
CAPN1-223ENST00000533079 FAM184BQ9ULE4 1060 aa15.03■□□□□ -0
CAPN1-223ENST00000533079 PGK2P07205 417 aa15.02■□□□□ -0
CAPN1-223ENST00000533079 TMEM240Q5SV17 173 aa15.02■□□□□ -0
CAPN1-223ENST00000533079 CCSAPQ6IQ19 270 aaPredicted RBP15.02■□□□□ -0
CAPN1-223ENST00000533079 CCDC129Q6ZRS4 1044 aa15.02■□□□□ -0
CAPN1-223ENST00000533079 ERC1Q8IUD2 1116 aa15.02■□□□□ -0
CAPN1-223ENST00000533079 SPICE1Q8N0Z3 855 aa15.02■□□□□ -0
CAPN1-223ENST00000533079 PCSK9Q8NBP7 692 aaKnown RBP15.02■□□□□ -0
CAPN1-223ENST00000533079 FRAT1Q92837 279 aaPredicted RBP15.02■□□□□ -0
CAPN1-223ENST00000533079 ZNF214Q9UL59 606 aaPredicted RBP15.02■□□□□ -0
CAPN1-223ENST00000533079 VWA5AO00534 786 aa15.01□□□□□ -0.01
CAPN1-223ENST00000533079 DUSP11O75319 330 aaKnown RBP15.01□□□□□ -0.01
CAPN1-223ENST00000533079 TAL1P17542 331 aaPredicted RBP15.01□□□□□ -0.01
CAPN1-223ENST00000533079 STAT3P40763 770 aa15.01□□□□□ -0.01
CAPN1-223ENST00000533079 SLC9C2Q5TAH2 1124 aa15.01□□□□□ -0.01
CAPN1-223ENST00000533079 MAMDC4Q6UXC1 1216 aa15.01□□□□□ -0.01
CAPN1-223ENST00000533079 ZNF467Q7Z7K2 595 aaPredicted RBP15.01□□□□□ -0.01
CAPN1-223ENST00000533079 AMOTL1Q8IY63 956 aa15.01□□□□□ -0.01
CAPN1-223ENST00000533079 FAM122AQ96E09 287 aa15.01□□□□□ -0.01
CAPN1-223ENST00000533079 TSPYL2Q9H2G4 693 aaPredicted RBP15.01□□□□□ -0.01
CAPN1-223ENST00000533079 SPC25Q9HBM1 224 aa15.01□□□□□ -0.01
CAPN1-223ENST00000533079 GOPCQ9HD26 462 aa15.01□□□□□ -0.01
CAPN1-223ENST00000533079 ATP8A2Q9NTI2 1148 aa15.01□□□□□ -0.01
CAPN1-223ENST00000533079 PPP1R9AQ9ULJ8 1098 aa15.01□□□□□ -0.01
CAPN1-223ENST00000533079 ZNFX1Q9P2E3 1918 aaKnown RBP15.01□□□□□ -0.01
CAPN1-223ENST00000533079 A0A0U1RQG5 324 aaPredicted RBP15□□□□□ -0.01
CAPN1-223ENST00000533079 TLR3O15455 904 aaKnown RBP15□□□□□ -0.01
CAPN1-223ENST00000533079 PDE6AP16499 860 aa15□□□□□ -0.01
CAPN1-223ENST00000533079 CDK7P50613 346 aa15□□□□□ -0.01
CAPN1-223ENST00000533079 KCNA10Q16322 511 aa15□□□□□ -0.01
CAPN1-223ENST00000533079 SIAH1Q8IUQ4 282 aa15□□□□□ -0.01
CAPN1-223ENST00000533079 TMEM57Q8N5G2 664 aa15□□□□□ -0.01
CAPN1-223ENST00000533079 SDR42E1Q8WUS8 393 aa15□□□□□ -0.01
CAPN1-223ENST00000533079 CLUAP1Q96AJ1 413 aa15□□□□□ -0.01
CAPN1-223ENST00000533079 LENG1Q96BZ8 264 aaPredicted RBP15□□□□□ -0.01
CAPN1-223ENST00000533079 C1QTNF1Q9BXJ1 281 aa15□□□□□ -0.01
CAPN1-223ENST00000533079 TEX13BQ9BXU2 312 aa15□□□□□ -0.01
CAPN1-223ENST00000533079 PRDM12Q9H4Q4 367 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms