RNA–Protein interactions for RNA: ENST00000531206.5

CDC27-207, Transcript of cell division cycle 27, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC27, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-207ENST00000531206 PACS2Q86VP3 889 aa3.88□□□□□ -1.79
CDC27-207ENST00000531206 NLGN2Q8NFZ4 835 aa3.88□□□□□ -1.79
CDC27-207ENST00000531206 ZCRB1Q8TBF4 217 aaKnown RBP3.88□□□□□ -1.79
CDC27-207ENST00000531206 WDR66Q8TBY9 1149 aa3.88□□□□□ -1.79
CDC27-207ENST00000531206 POF1BQ8WVV4 589 aa3.88□□□□□ -1.79
CDC27-207ENST00000531206 BRF1Q92994 677 aa3.88□□□□□ -1.79
CDC27-207ENST00000531206 CSRNP1Q96S65 589 aa3.88□□□□□ -1.79
CDC27-207ENST00000531206 PHACTR1Q9C0D0 580 aa3.88□□□□□ -1.79
CDC27-207ENST00000531206 MUC3BQ9H195 1237 aa3.88□□□□□ -1.79
CDC27-207ENST00000531206 CEP72Q9P209 647 aa3.88□□□□□ -1.79
CDC27-207ENST00000531206 NSD3Q9BZ95 1437 aa3.88□□□□□ -1.79
CDC27-207ENST00000531206 ARFGEF2Q9Y6D5 1785 aa3.88□□□□□ -1.79
CDC27-207ENST00000531206 H3BRJ5 948 aa3.88□□□□□ -1.79
CDC27-207ENST00000531206 RASGRP1O95267 797 aa3.88□□□□□ -1.79
CDC27-207ENST00000531206 F2P00734 622 aa3.88□□□□□ -1.79
CDC27-207ENST00000531206 GRNP28799 593 aaKnown RBP3.88□□□□□ -1.79
CDC27-207ENST00000531206 CHKAP35790 457 aa3.88□□□□□ -1.79
CDC27-207ENST00000531206 STAT3P40763 770 aa3.88□□□□□ -1.79
CDC27-207ENST00000531206 NEK2P51955 445 aa3.88□□□□□ -1.79
CDC27-207ENST00000531206 TIGD6Q17RP2 521 aa3.88□□□□□ -1.79
CDC27-207ENST00000531206 PEAR1Q5VY43 1037 aaPredicted RBP3.88□□□□□ -1.79
CDC27-207ENST00000531206 GPR153Q6NV75 609 aa3.88□□□□□ -1.79
CDC27-207ENST00000531206 HSCBQ8IWL3 235 aa3.88□□□□□ -1.79
CDC27-207ENST00000531206 STK35Q8TDR2 534 aa3.88□□□□□ -1.79
CDC27-207ENST00000531206 XAGE3Q8WTP9 111 aa3.88□□□□□ -1.79
CDC27-207ENST00000531206 ZFRQ96KR1 1074 aaKnown RBP3.88□□□□□ -1.79
CDC27-207ENST00000531206 GPR101Q96P66 508 aaPredicted RBP3.88□□□□□ -1.79
CDC27-207ENST00000531206 CRB3Q9BUF7 120 aa3.88□□□□□ -1.79
CDC27-207ENST00000531206 IFT80Q9P2H3 777 aaPredicted RBP3.88□□□□□ -1.79
CDC27-207ENST00000531206 PCDHB3Q9Y5E6 796 aa3.88□□□□□ -1.79
CDC27-207ENST00000531206 MYOM3Q5VTT5 1437 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 PASKQ96RG2 1323 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 LTBP3Q9NS15 1303 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 LRRC10BA6NIK2 292 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 HMGB2P26583 209 aaKnown RBP3.87□□□□□ -1.79
CDC27-207ENST00000531206 HALP42357 657 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 GRIA4P48058 902 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 TBC1D8BQ0IIM8 1120 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 CTC1Q2NKJ3 1217 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 ARHGAP29Q52LW3 1261 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 SNAP47Q5SQN1 464 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 AGAP9Q5VTM2 703 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 C16orf86Q6ZW13 317 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 KCTD15Q96SI1 283 aaPredicted RBP3.87□□□□□ -1.79
CDC27-207ENST00000531206 SRRTQ9BXP5 876 aaKnown RBP3.87□□□□□ -1.79
CDC27-207ENST00000531206 DNAJC25Q9H1X3 360 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 NDOR1Q9UHB4 597 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 CORO2BQ9UQ03 480 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 FAM208AQ9UK61 1670 aaKnown RBP3.87□□□□□ -1.79
CDC27-207ENST00000531206 FIGNL2A6NMB9 653 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 TBX3O15119 743 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 SNX2O60749 519 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 NR3C2P08235 984 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 HTRA3P83110 453 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 EXOSC10Q01780 885 aaKnown RBP3.87□□□□□ -1.79
CDC27-207ENST00000531206 PABPC4Q13310 644 aaKnown RBP eCLIP3.87□□□□□ -1.794e-7■□□□□ 8
CDC27-207ENST00000531206 STAT4Q14765 748 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 TLR1Q15399 786 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 SURF1Q15526 300 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 ZKSCAN2Q63HK3 967 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 ZCCHC8Q6NZY4 707 aaKnown RBP3.87□□□□□ -1.79
CDC27-207ENST00000531206 RINLQ6ZS11 566 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 SNX32Q86XE0 403 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 EGFL7Q9UHF1 273 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 SLC45A1Q9Y2W3 748 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 COL5A2P05997 1499 aaPredicted RBP3.87□□□□□ -1.79
CDC27-207ENST00000531206 RGPD5Q99666 1765 aa3.87□□□□□ -1.79
CDC27-207ENST00000531206 RPGRIP1LQ68CZ1 1315 aa3.86□□□□□ -1.79
CDC27-207ENST00000531206 TRPM7Q96QT4 1865 aa3.86□□□□□ -1.79
CDC27-207ENST00000531206 DDX3YO15523 660 aaKnown RBP3.86□□□□□ -1.79
CDC27-207ENST00000531206 GLULP15104 373 aa3.86□□□□□ -1.79
CDC27-207ENST00000531206 IFRD2Q12894 506 aaPredicted RBP3.86□□□□□ -1.79
CDC27-207ENST00000531206 TXNRD1Q16881 649 aa3.86□□□□□ -1.79
CDC27-207ENST00000531206 SLC45A4Q5BKX6 768 aa3.86□□□□□ -1.79
CDC27-207ENST00000531206 KLHDC7AQ5VTJ3 777 aa3.86□□□□□ -1.79
CDC27-207ENST00000531206 HEATR6Q6AI08 1181 aaKnown RBP3.86□□□□□ -1.79
CDC27-207ENST00000531206 TRIM50Q86XT4 487 aa3.86□□□□□ -1.79
CDC27-207ENST00000531206 C3orf58Q8NDZ4 430 aa3.86□□□□□ -1.79
CDC27-207ENST00000531206 SCLT1Q96NL6 688 aa3.86□□□□□ -1.79
CDC27-207ENST00000531206 CBX8Q9HC52 389 aa3.86□□□□□ -1.79
CDC27-207ENST00000531206 CRTAC1Q9NQ79 661 aa3.86□□□□□ -1.79
CDC27-207ENST00000531206 AVENQ9NQS1 362 aaPredicted RBP3.86□□□□□ -1.79
CDC27-207ENST00000531206 APEX2Q9UBZ4 518 aa3.86□□□□□ -1.79
CDC27-207ENST00000531206 COQ6Q9Y2Z9 468 aa3.86□□□□□ -1.79
CDC27-207ENST00000531206 TFE3P19532 575 aaPredicted RBP3.86□□□□□ -1.79
CDC27-207ENST00000531206 RNF144AP50876 292 aaPredicted RBP3.86□□□□□ -1.79
CDC27-207ENST00000531206 ZNF252P-AS1Q0IIN9 211 aa3.86□□□□□ -1.79
CDC27-207ENST00000531206 CAMK2GQ13555 558 aaPredicted RBP3.86□□□□□ -1.79
CDC27-207ENST00000531206 KCTD2Q14681 263 aa3.86□□□□□ -1.79
CDC27-207ENST00000531206 NBPF20Q3BBV1 942 aa3.86□□□□□ -1.79
CDC27-207ENST00000531206 PLA2G2CQ5R387 149 aa3.86□□□□□ -1.79
CDC27-207ENST00000531206 EPM2AIP1Q7L775 607 aaPredicted RBP3.86□□□□□ -1.79
CDC27-207ENST00000531206 ZNF438Q7Z4V0 828 aa3.86□□□□□ -1.79
CDC27-207ENST00000531206 GJD3Q8N144 294 aa3.86□□□□□ -1.79
CDC27-207ENST00000531206 PNPLA7Q6ZV29 1317 aa3.86□□□□□ -1.79
CDC27-207ENST00000531206 ZNF644Q9H582 1327 aaPredicted RBP3.86□□□□□ -1.79
CDC27-207ENST00000531206 NRXN2Q9P2S2 1712 aa3.86□□□□□ -1.79
CDC27-207ENST00000531206 CRB1P82279 1406 aa3.86□□□□□ -1.79
CDC27-207ENST00000531206 LOC102724428A0A0B4J2F2 783 aa3.86□□□□□ -1.79
CDC27-207ENST00000531206 MEN1O00255 615 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms