RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 PSMD14O00487 310 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 CREB3O43889 395 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 ATP1A1P05023 1023 aaKnown RBP8.68□□□□□ -1.02
PTPRK-219ENST00000531050 PFKFB1P16118 471 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 ZNF24P17028 368 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 FBLN1P23142 703 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 CNGA1P29973 690 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 MXRA7P84157 204 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 MPP3Q13368 585 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 ADAM9Q13443 819 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 EZH2Q15910 746 aaKnown RBP8.68□□□□□ -1.02
PTPRK-219ENST00000531050 ZMYM1Q5SVZ6 1142 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 HDGFL1Q5TGJ6 251 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 PAPD7Q5XG87 772 aaKnown RBP8.68□□□□□ -1.02
PTPRK-219ENST00000531050 PPP4R3AQ6IN85 833 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 DPY19L2Q6NUT2 758 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 C8orf76Q96K31 380 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 CAPZA3Q96KX2 299 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 OCEL1Q9H607 264 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 PPANQ9NQ55 473 aaKnown RBP8.68□□□□□ -1.02
PTPRK-219ENST00000531050 TECPR2O15040 1411 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 UBN2Q6ZU65 1347 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 DLG5Q8TDM6 1919 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 CLTAP09496 248 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 BMP6P22004 513 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 EIF4BP23588 611 aaKnown RBP8.68□□□□□ -1.02
PTPRK-219ENST00000531050 DEUP1Q05D60 604 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 CKAP4Q07065 602 aaKnown RBP8.68□□□□□ -1.02
PTPRK-219ENST00000531050 ITGB3BPQ13352 177 aaPredicted RBP8.68□□□□□ -1.02
PTPRK-219ENST00000531050 CCDC38Q502W7 563 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 DZIP3Q86Y13 1208 aaKnown RBP8.68□□□□□ -1.02
PTPRK-219ENST00000531050 TEX9Q8N6V9 391 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 NSUN7Q8NE18 718 aaKnown RBP8.68□□□□□ -1.02
PTPRK-219ENST00000531050 CAVIN3Q969G5 261 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 CLIC4Q9Y696 253 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 SAR1BQ9Y6B6 198 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 MROH7-TTC4A0A0A0MT08 1334 aa8.67□□□□□ -1.02
PTPRK-219ENST00000531050 OVOS2A0A0G2JMS6 1433 aa8.67□□□□□ -1.02
PTPRK-219ENST00000531050 OVOS2A0A0J9YW53 1432 aa8.67□□□□□ -1.02
PTPRK-219ENST00000531050 WASLO00401 505 aaPredicted RBP8.67□□□□□ -1.02
PTPRK-219ENST00000531050 TRAPPC3O43617 180 aa8.67□□□□□ -1.02
PTPRK-219ENST00000531050 MFAP3LO75121 409 aa8.67□□□□□ -1.02
PTPRK-219ENST00000531050 CTDNEP1O95476 244 aa8.67□□□□□ -1.02
PTPRK-219ENST00000531050 CCNG1P51959 295 aa8.67□□□□□ -1.02
PTPRK-219ENST00000531050 C2orf54Q08AI8 447 aa8.67□□□□□ -1.02
PTPRK-219ENST00000531050 MAP3K12Q12852 859 aa8.67□□□□□ -1.02
PTPRK-219ENST00000531050 PNOCQ13519 176 aa8.67□□□□□ -1.02
PTPRK-219ENST00000531050 ZNF268Q14587 947 aaPredicted RBP8.67□□□□□ -1.02
PTPRK-219ENST00000531050 GLE1Q53GS7 698 aaKnown RBP8.67□□□□□ -1.02
PTPRK-219ENST00000531050 ANKRD20A2Q5SQ80 823 aa8.67□□□□□ -1.02
PTPRK-219ENST00000531050 ANKRD20A1Q5TYW2 823 aa8.67□□□□□ -1.02
PTPRK-219ENST00000531050 ANKRD20A3Q5VUR7 823 aa8.67□□□□□ -1.02
PTPRK-219ENST00000531050 OVOS2Q6IE36 1432 aa8.67□□□□□ -1.02
PTPRK-219ENST00000531050 OLFM4Q6UX06 510 aa8.67□□□□□ -1.02
PTPRK-219ENST00000531050 NRKQ7Z2Y5 1582 aa8.67□□□□□ -1.02
PTPRK-219ENST00000531050 PNMA8AQ86V59 439 aaPredicted RBP8.67□□□□□ -1.02
PTPRK-219ENST00000531050 APLFQ8IW19 511 aaPredicted RBP8.67□□□□□ -1.02
PTPRK-219ENST00000531050 IQCKQ8N0W5 287 aa8.67□□□□□ -1.02
PTPRK-219ENST00000531050 CCDC63Q8NA47 563 aa8.67□□□□□ -1.02
PTPRK-219ENST00000531050 CNBD1Q8NA66 436 aa8.67□□□□□ -1.02
PTPRK-219ENST00000531050 MIPOL1Q8TD10 442 aa8.67□□□□□ -1.02
PTPRK-219ENST00000531050 TRIM10Q9UDY6 481 aa8.67□□□□□ -1.02
PTPRK-219ENST00000531050 DMGDHQ9UI17 866 aaKnown RBP8.67□□□□□ -1.02
PTPRK-219ENST00000531050 A0A1B0GTH6 734 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 LRRD1A4D1F6 860 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 TEX33O43247 280 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 RPL13P26373 211 aaKnown RBP8.66□□□□□ -1.02
PTPRK-219ENST00000531050 ERVK-24P63145 666 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 FMR1Q06787 632 aaKnown RBP eCLIP8.66□□□□□ -1.02
PTPRK-219ENST00000531050 DYNC1I2Q13409 638 aaKnown RBP8.66□□□□□ -1.02
PTPRK-219ENST00000531050 STK38Q15208 465 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 LONRF3Q496Y0 759 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 ANO7Q6IWH7 933 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 EMBQ6PCB8 327 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 CACNA2D3Q8IZS8 1091 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 SPICE1Q8N0Z3 855 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 RHPN1Q8TCX5 695 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 CPLX3Q8WVH0 158 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 SEC62Q99442 399 aaKnown RBP8.66□□□□□ -1.02
PTPRK-219ENST00000531050 TRIM7Q9C029 511 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 ARHGEF10LQ9HCE6 1279 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 AATFQ9NY61 560 aaKnown RBP eCLIP8.66□□□□□ -1.02
PTPRK-219ENST00000531050 NFE2L3Q9Y4A8 694 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 EMILIN1Q9Y6C2 1016 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 USP42Q9H9J4 1324 aaKnown RBP8.66□□□□□ -1.02
PTPRK-219ENST00000531050 UBR1Q8IWV7 1749 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 ABLIM1O14639 778 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 VIMP08670 466 aaKnown RBP8.66□□□□□ -1.02
PTPRK-219ENST00000531050 CMA1P23946 247 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 EPHB4P54760 987 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 GUCY1B3Q02153 619 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 MAATS1Q7Z4T9 603 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 ERICH1Q86X53 443 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 NME9Q86XW9 330 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 FOXP4Q8IVH2 680 aaPredicted RBP8.66□□□□□ -1.02
PTPRK-219ENST00000531050 KCNG4Q8TDN1 519 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 MAIP1Q8WWC4 291 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 SYT15Q9BQS2 421 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 LLPHQ9BRT6 129 aaKnown RBP8.66□□□□□ -1.02
PTPRK-219ENST00000531050 PREBQ9HCU5 417 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms