RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 SEC16BQ96JE7 1060 aa5.11□□□□□ -1.59
CD44-226ENST00000527889 SPACA7Q96KW9 195 aa5.11□□□□□ -1.59
CD44-226ENST00000527889 CAMKK2Q96RR4 588 aa5.11□□□□□ -1.59
CD44-226ENST00000527889 PLCD4Q9BRC7 762 aa5.11□□□□□ -1.59
CD44-226ENST00000527889 SPON2Q9BUD6 331 aa5.11□□□□□ -1.59
CD44-226ENST00000527889 METTL22Q9BUU2 404 aaPredicted RBP5.11□□□□□ -1.59
CD44-226ENST00000527889 NOC4LQ9BVI4 516 aaKnown RBP5.11□□□□□ -1.59
CD44-226ENST00000527889 SUV39H2Q9H5I1 410 aa5.11□□□□□ -1.59
CD44-226ENST00000527889 C9orf78Q9NZ63 289 aaPredicted RBP5.11□□□□□ -1.59
CD44-226ENST00000527889 ANKIB1Q9P2G1 1089 aa5.11□□□□□ -1.59
CD44-226ENST00000527889 ADAMTS1Q9UHI8 967 aa5.11□□□□□ -1.59
CD44-226ENST00000527889 ZBTB1Q9Y2K1 713 aa5.11□□□□□ -1.59
CD44-226ENST00000527889 CDK5RAP2Q96SN8 1893 aa5.11□□□□□ -1.59
CD44-226ENST00000527889 MYH6P13533 1939 aa5.11□□□□□ -1.59
CD44-226ENST00000527889 CCDC85CA6NKD9 419 aa5.1□□□□□ -1.59
CD44-226ENST00000527889 K7ELQ4 463 aaPredicted RBP5.1□□□□□ -1.59
CD44-226ENST00000527889 HMMRO75330 724 aa5.1□□□□□ -1.59
CD44-226ENST00000527889 STARD3NLO95772 234 aa5.1□□□□□ -1.59
CD44-226ENST00000527889 MYH8P13535 1937 aa5.1□□□□□ -1.59
CD44-226ENST00000527889 ATP4AP20648 1035 aa5.1□□□□□ -1.59
CD44-226ENST00000527889 GSTT1P30711 240 aa5.1□□□□□ -1.59
CD44-226ENST00000527889 PHKA2P46019 1235 aa5.1□□□□□ -1.59
CD44-226ENST00000527889 CRKLP46109 303 aaKnown RBP5.1□□□□□ -1.59
CD44-226ENST00000527889 MAP3K10Q02779 954 aa5.1□□□□□ -1.59
CD44-226ENST00000527889 NUCB1Q02818 461 aa5.1□□□□□ -1.59
CD44-226ENST00000527889 NEXNQ0ZGT2 675 aa5.1□□□□□ -1.59
CD44-226ENST00000527889 ANKRD45Q5TZF3 282 aa5.1□□□□□ -1.59
CD44-226ENST00000527889 NPAS3Q8IXF0 933 aa5.1□□□□□ -1.59
CD44-226ENST00000527889 RPAP2Q8IXW5 612 aaPredicted RBP5.1□□□□□ -1.59
CD44-226ENST00000527889 CKAP2LQ8IYA6 745 aa5.1□□□□□ -1.59
CD44-226ENST00000527889 C1orf127Q8N9H9 656 aa5.1□□□□□ -1.59
CD44-226ENST00000527889 C3orf58Q8NDZ4 430 aa5.1□□□□□ -1.59
CD44-226ENST00000527889 GLIS3Q8NEA6 775 aa5.1□□□□□ -1.59
CD44-226ENST00000527889 LINS1Q8NG48 757 aa5.1□□□□□ -1.59
CD44-226ENST00000527889 DOCK2Q92608 1830 aa5.1□□□□□ -1.59
CD44-226ENST00000527889 SMARCC1Q92922 1105 aaPredicted RBP5.1□□□□□ -1.59
CD44-226ENST00000527889 GPATCH3Q96I76 525 aa5.1□□□□□ -1.59
CD44-226ENST00000527889 SUCLG2Q96I99 432 aa5.1□□□□□ -1.59
CD44-226ENST00000527889 TEX13AQ9BXU3 409 aaPredicted RBP5.1□□□□□ -1.59
CD44-226ENST00000527889 TNRC6CQ9HCJ0 1690 aaKnown RBP5.1□□□□□ -1.59
CD44-226ENST00000527889 CNTN3Q9P232 1028 aa5.1□□□□□ -1.59
CD44-226ENST00000527889 BAZ2AQ9UIF9 1905 aaKnown RBP5.1□□□□□ -1.59
CD44-226ENST00000527889 MYH2Q9UKX2 1941 aa5.1□□□□□ -1.59
CD44-226ENST00000527889 EXOC6BQ9Y2D4 811 aa5.1□□□□□ -1.59
CD44-226ENST00000527889 MRPL42Q9Y6G3 142 aaKnown RBP5.1□□□□□ -1.59
CD44-226ENST00000527889 GRM8O00222 908 aa5.09□□□□□ -1.59
CD44-226ENST00000527889 VSIG8P0DPA2 414 aa5.09□□□□□ -1.59
CD44-226ENST00000527889 XRCC5P13010 732 aaKnown RBP5.09□□□□□ -1.59
CD44-226ENST00000527889 GPTP24298 496 aa5.09□□□□□ -1.59
CD44-226ENST00000527889 ATP8B2P98198 1209 aa5.09□□□□□ -1.59
CD44-226ENST00000527889 GCKRQ14397 625 aa5.09□□□□□ -1.59
CD44-226ENST00000527889 HLFQ16534 295 aa5.09□□□□□ -1.59
CD44-226ENST00000527889 EPHA10Q5JZY3 1008 aa5.09□□□□□ -1.59
CD44-226ENST00000527889 INTS5Q6P9B9 1019 aaKnown RBP5.09□□□□□ -1.59
CD44-226ENST00000527889 KIF6Q6ZMV9 814 aa5.09□□□□□ -1.59
CD44-226ENST00000527889 BICDL1Q6ZP65 573 aa5.09□□□□□ -1.59
CD44-226ENST00000527889 UBE3BQ7Z3V4 1068 aa5.09□□□□□ -1.59
CD44-226ENST00000527889 KRT27Q7Z3Y8 459 aa5.09□□□□□ -1.59
CD44-226ENST00000527889 PPP1R42Q7Z4L9 355 aa5.09□□□□□ -1.59
CD44-226ENST00000527889 CHD1LQ86WJ1 897 aa5.09□□□□□ -1.59
CD44-226ENST00000527889 KIAA0825Q8IV33 1275 aa5.09□□□□□ -1.59
CD44-226ENST00000527889 GPR161Q8N6U8 529 aaKnown RBP5.09□□□□□ -1.59
CD44-226ENST00000527889 LINC00116Q8NCU8 138 aa5.09□□□□□ -1.59
CD44-226ENST00000527889 MKL1Q969V6 931 aa5.09□□□□□ -1.59
CD44-226ENST00000527889 GCC1Q96CN9 775 aa5.09□□□□□ -1.59
CD44-226ENST00000527889 MRFAP1L1Q96HT8 127 aa5.09□□□□□ -1.59
CD44-226ENST00000527889 KAZALD1Q96I82 304 aa5.09□□□□□ -1.59
CD44-226ENST00000527889 ZIC5Q96T25 663 aa5.09□□□□□ -1.59
CD44-226ENST00000527889 BICC1Q9H694 974 aaKnown RBP5.09□□□□□ -1.59
CD44-226ENST00000527889 DCTPP1Q9H773 170 aa5.09□□□□□ -1.59
CD44-226ENST00000527889 ZNF408Q9H9D4 720 aa5.09□□□□□ -1.59
CD44-226ENST00000527889 TTF2Q9UNY4 1162 aaKnown RBP5.09□□□□□ -1.59
CD44-226ENST00000527889 A0A0C4DFX4 3053 aa5.09□□□□□ -1.6
CD44-226ENST00000527889 COL4A1P02462 1669 aa5.08□□□□□ -1.6
CD44-226ENST00000527889 COL15A1P39059 1388 aa5.08□□□□□ -1.6
CD44-226ENST00000527889 UTYO14607 1347 aa5.08□□□□□ -1.6
CD44-226ENST00000527889 MAP3K15Q6ZN16 1313 aa5.08□□□□□ -1.6
CD44-226ENST00000527889 A0A087WZG4 1122 aa5.08□□□□□ -1.6
CD44-226ENST00000527889 SRGAP3O43295 1099 aa5.08□□□□□ -1.6
CD44-226ENST00000527889 XYLBO75191 536 aa5.08□□□□□ -1.6
CD44-226ENST00000527889 EGFRP00533 1210 aa5.08□□□□□ -1.6
CD44-226ENST00000527889 SSBP05455 408 aaKnown RBP eCLIP5.08□□□□□ -1.6
CD44-226ENST00000527889 THBS1P07996 1170 aa5.08□□□□□ -1.6
CD44-226ENST00000527889 ITGA6P23229 1130 aa5.08□□□□□ -1.6
CD44-226ENST00000527889 HSD3B2P26439 372 aa5.08□□□□□ -1.6
CD44-226ENST00000527889 GMPRP36959 345 aa5.08□□□□□ -1.6
CD44-226ENST00000527889 NASPP49321 788 aaPredicted RBP5.08□□□□□ -1.6
CD44-226ENST00000527889 TYRO3Q06418 890 aa5.08□□□□□ -1.6
CD44-226ENST00000527889 KIAA0319Q5VV43 1072 aa5.08□□□□□ -1.6
CD44-226ENST00000527889 TMED8Q6PL24 325 aaPredicted RBP5.08□□□□□ -1.6
CD44-226ENST00000527889 LRRC69Q6ZNQ3 347 aa5.08□□□□□ -1.6
CD44-226ENST00000527889 SMIM5Q71RC9 77 aa5.08□□□□□ -1.6
CD44-226ENST00000527889 TEX2Q8IWB9 1127 aa5.08□□□□□ -1.6
CD44-226ENST00000527889 C16orf71Q8IYS4 520 aaPredicted RBP5.08□□□□□ -1.6
CD44-226ENST00000527889 OTUD7AQ8TE49 926 aaPredicted RBP5.08□□□□□ -1.6
CD44-226ENST00000527889 SSH3Q8TE77 659 aa5.08□□□□□ -1.6
CD44-226ENST00000527889 EAF1Q96JC9 268 aaPredicted RBP5.08□□□□□ -1.6
CD44-226ENST00000527889 TMEM74Q96NL1 305 aa5.08□□□□□ -1.6
CD44-226ENST00000527889 TRIM56Q9BRZ2 755 aaKnown RBP5.08□□□□□ -1.6
CD44-226ENST00000527889 CWC25Q9NXE8 425 aaPredicted RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms