RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 TAL1P17542 331 aaPredicted RBP19.82■□□□□ 0.76
CHMP4A-203ENST00000527154 POLA2Q14181 598 aa19.82■□□□□ 0.76
CHMP4A-203ENST00000527154 SIAH1Q8IUQ4 282 aa19.82■□□□□ 0.76
CHMP4A-203ENST00000527154 CDCA7LQ96GN5 454 aa19.82■□□□□ 0.76
CHMP4A-203ENST00000527154 RIOK1Q9BRS2 568 aaKnown RBP19.82■□□□□ 0.76
CHMP4A-203ENST00000527154 PRDM12Q9H4Q4 367 aa19.82■□□□□ 0.76
CHMP4A-203ENST00000527154 MYO9BQ13459 2157 aa19.81■□□□□ 0.76
CHMP4A-203ENST00000527154 DCDC2CA8MYV0 355 aa19.81■□□□□ 0.76
CHMP4A-203ENST00000527154 SLC25A27O95847 323 aa19.81■□□□□ 0.76
CHMP4A-203ENST00000527154 AKR1A1P14550 325 aa19.81■□□□□ 0.76
CHMP4A-203ENST00000527154 CST5P28325 142 aaPredicted RBP19.81■□□□□ 0.76
CHMP4A-203ENST00000527154 USP5P45974 858 aa19.81■□□□□ 0.76
CHMP4A-203ENST00000527154 ACLYP53396 1101 aa19.81■□□□□ 0.76
CHMP4A-203ENST00000527154 MIGA1Q8NAN2 632 aa19.81■□□□□ 0.76
CHMP4A-203ENST00000527154 ATG4CQ96DT6 458 aa19.81■□□□□ 0.76
CHMP4A-203ENST00000527154 ELP1O95163 1332 aa19.8■□□□□ 0.76
CHMP4A-203ENST00000527154 GRXCR1A8MXD5 290 aa19.8■□□□□ 0.76
CHMP4A-203ENST00000527154 GNAI2P04899 355 aa19.8■□□□□ 0.76
CHMP4A-203ENST00000527154 BMP1P13497 986 aa19.8■□□□□ 0.76
CHMP4A-203ENST00000527154 PPIGQ13427 754 aaKnown RBP eCLIP19.8■□□□□ 0.76
CHMP4A-203ENST00000527154 TMEM132BQ14DG7 1078 aa19.8■□□□□ 0.76
CHMP4A-203ENST00000527154 NCAPG2Q86XI2 1143 aa19.8■□□□□ 0.76
CHMP4A-203ENST00000527154 C1QTNF1Q9BXJ1 281 aa19.8■□□□□ 0.76
CHMP4A-203ENST00000527154 TANGO6Q9C0B7 1094 aa19.8■□□□□ 0.76
CHMP4A-203ENST00000527154 STARD7Q9NQZ5 370 aa19.8■□□□□ 0.76
CHMP4A-203ENST00000527154 CXXC1Q9P0U4 656 aaPredicted RBP19.8■□□□□ 0.76
CHMP4A-203ENST00000527154 DBNLQ9UJU6 430 aaKnown RBP19.8■□□□□ 0.76
CHMP4A-203ENST00000527154 ZNFX1Q9P2E3 1918 aaKnown RBP19.8■□□□□ 0.76
CHMP4A-203ENST00000527154 RIOX2Q8IUF8 465 aa19.79■□□□□ 0.76
CHMP4A-203ENST00000527154 MSL3Q8N5Y2 521 aaKnown RBP19.79■□□□□ 0.76
CHMP4A-203ENST00000527154 NUP133Q8WUM0 1156 aa19.79■□□□□ 0.76
CHMP4A-203ENST00000527154 TMX2Q9Y320 296 aa19.79■□□□□ 0.76
CHMP4A-203ENST00000527154 PLXNA1Q9UIW2 1896 aa19.79■□□□□ 0.76
CHMP4A-203ENST00000527154 SYNRGQ9UMZ2 1314 aa19.78■□□□□ 0.76
CHMP4A-203ENST00000527154 RARSP54136 660 aaKnown RBP19.78■□□□□ 0.76
CHMP4A-203ENST00000527154 CCDC174Q6PII3 467 aa19.78■□□□□ 0.76
CHMP4A-203ENST00000527154 TMEM179Q6ZVK1 233 aa19.78■□□□□ 0.76
CHMP4A-203ENST00000527154 SSH3Q8TE77 659 aa19.78■□□□□ 0.76
CHMP4A-203ENST00000527154 LENG1Q96BZ8 264 aaPredicted RBP19.78■□□□□ 0.76
CHMP4A-203ENST00000527154 MROH7Q68CQ1 1323 aa19.77■□□□□ 0.76
CHMP4A-203ENST00000527154 FLOT1O75955 427 aa19.77■□□□□ 0.76
CHMP4A-203ENST00000527154 NKX3-2P78367 333 aa19.77■□□□□ 0.76
CHMP4A-203ENST00000527154 EVX2Q03828 476 aa19.77■□□□□ 0.76
CHMP4A-203ENST00000527154 PSRC1Q6PGN9 363 aaPredicted RBP19.77■□□□□ 0.76
CHMP4A-203ENST00000527154 MAMDC4Q6UXC1 1216 aa19.77■□□□□ 0.76
CHMP4A-203ENST00000527154 MAGEB6Q8N7X4 407 aa19.77■□□□□ 0.76
CHMP4A-203ENST00000527154 REPS2Q8NFH8 660 aa19.77■□□□□ 0.76
CHMP4A-203ENST00000527154 PPM1EQ8WY54 764 aa19.77■□□□□ 0.76
CHMP4A-203ENST00000527154 HERVK_113Q902F9 699 aa19.77■□□□□ 0.76
CHMP4A-203ENST00000527154 VCPKMTQ9H867 229 aa19.77■□□□□ 0.76
CHMP4A-203ENST00000527154 ZNF214Q9UL59 606 aaPredicted RBP19.77■□□□□ 0.76
CHMP4A-203ENST00000527154 WDR46O15213 610 aaKnown RBP19.76■□□□□ 0.75
CHMP4A-203ENST00000527154 IDH1O75874 414 aaKnown RBP19.76■□□□□ 0.75
CHMP4A-203ENST00000527154 PGK2P07205 417 aa19.76■□□□□ 0.75
CHMP4A-203ENST00000527154 CSF2RAP15509 400 aa19.76■□□□□ 0.75
CHMP4A-203ENST00000527154 RAB30Q15771 203 aa19.76■□□□□ 0.75
CHMP4A-203ENST00000527154 KCNA10Q16322 511 aa19.76■□□□□ 0.75
CHMP4A-203ENST00000527154 MMP19Q99542 508 aa19.76■□□□□ 0.75
CHMP4A-203ENST00000527154 NOP58Q9Y2X3 529 aaKnown RBP19.76■□□□□ 0.75
CHMP4A-203ENST00000527154 PIEZO1Q92508 2521 aa19.76■□□□□ 0.75
CHMP4A-203ENST00000527154 TRANK1O15050 2925 aa19.75■□□□□ 0.75
CHMP4A-203ENST00000527154 DUSP11O75319 330 aaKnown RBP19.75■□□□□ 0.75
CHMP4A-203ENST00000527154 PLS1Q14651 629 aa19.75■□□□□ 0.75
CHMP4A-203ENST00000527154 ZNF365Q70YC5 407 aa19.75■□□□□ 0.75
CHMP4A-203ENST00000527154 FAM126BQ8IXS8 530 aa19.75■□□□□ 0.75
CHMP4A-203ENST00000527154 ANTXR1Q9H6X2 564 aa19.75■□□□□ 0.75
CHMP4A-203ENST00000527154 TLR7Q9NYK1 1049 aaKnown RBP19.75■□□□□ 0.75
CHMP4A-203ENST00000527154 DNAJC25-GNG10A0A024R161 153 aa19.74■□□□□ 0.75
CHMP4A-203ENST00000527154 MYADML2A6NDP7 307 aa19.74■□□□□ 0.75
CHMP4A-203ENST00000527154 SNAI1O95863 264 aaPredicted RBP19.74■□□□□ 0.75
CHMP4A-203ENST00000527154 CD4P01730 458 aa19.74■□□□□ 0.75
CHMP4A-203ENST00000527154 TRIM27P14373 513 aa19.74■□□□□ 0.75
CHMP4A-203ENST00000527154 COPB2P35606 906 aa19.74■□□□□ 0.75
CHMP4A-203ENST00000527154 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.74■□□□□ 0.75
CHMP4A-203ENST00000527154 TMEM199Q8N511 208 aa19.74■□□□□ 0.75
CHMP4A-203ENST00000527154 UPF3AQ9H1J1 476 aaKnown RBP19.74■□□□□ 0.75
CHMP4A-203ENST00000527154 POU3F3P20264 500 aaPredicted RBP19.73■□□□□ 0.75
CHMP4A-203ENST00000527154 KCTD2Q14681 263 aa19.73■□□□□ 0.75
CHMP4A-203ENST00000527154 CCDC129Q6ZRS4 1044 aa19.73■□□□□ 0.75
CHMP4A-203ENST00000527154 EAF2Q96CJ1 260 aaPredicted RBP19.73■□□□□ 0.75
CHMP4A-203ENST00000527154 GLT1D1Q96MS3 346 aa19.73■□□□□ 0.75
CHMP4A-203ENST00000527154 NECAB3Q96P71 396 aaPredicted RBP19.73■□□□□ 0.75
CHMP4A-203ENST00000527154 IL23AQ9NPF7 189 aa19.73■□□□□ 0.75
CHMP4A-203ENST00000527154 SWAP70Q9UH65 585 aa19.73■□□□□ 0.75
CHMP4A-203ENST00000527154 FAM184BQ9ULE4 1060 aa19.73■□□□□ 0.75
CHMP4A-203ENST00000527154 CNPY2Q9Y2B0 182 aa19.73■□□□□ 0.75
CHMP4A-203ENST00000527154 YBX2Q9Y2T7 364 aaKnown RBP19.73■□□□□ 0.75
CHMP4A-203ENST00000527154 COL11A1P12107 1806 aaPredicted RBP19.73■□□□□ 0.75
CHMP4A-203ENST00000527154 NAV1Q8NEY1 1877 aa19.73■□□□□ 0.75
CHMP4A-203ENST00000527154 ARVCFO00192 962 aa19.72■□□□□ 0.75
CHMP4A-203ENST00000527154 VWA5AO00534 786 aa19.72■□□□□ 0.75
CHMP4A-203ENST00000527154 ADCY6O43306 1168 aa19.72■□□□□ 0.75
CHMP4A-203ENST00000527154 POLR3DP05423 398 aaPredicted RBP19.72■□□□□ 0.75
CHMP4A-203ENST00000527154 STAT3P40763 770 aa19.72■□□□□ 0.75
CHMP4A-203ENST00000527154 CCDC85BQ15834 202 aaPredicted RBP19.72■□□□□ 0.75
CHMP4A-203ENST00000527154 ZNF467Q7Z7K2 595 aaPredicted RBP19.72■□□□□ 0.75
CHMP4A-203ENST00000527154 SPICE1Q8N0Z3 855 aa19.72■□□□□ 0.75
CHMP4A-203ENST00000527154 SLC43A3Q8NBI5 491 aa19.72■□□□□ 0.75
CHMP4A-203ENST00000527154 SH2D4AQ9H788 454 aa19.72■□□□□ 0.75
CHMP4A-203ENST00000527154 ARHGEF10LQ9HCE6 1279 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms