RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 SPDYE16A6NNV3 312 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 NMT2O60551 498 aa6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 ZBED4O75132 1171 aa6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 CYP21A2P08686 494 aa6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 FDX1P10109 184 aa6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 DSG3P32926 999 aa6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 KRT32Q14532 448 aa6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 SLC9C1Q4G0N8 1177 aa6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 IFIT1BQ5T764 474 aaKnown RBP6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 RCSD1Q6JBY9 416 aa6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 LBX2Q6XYB7 198 aa6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 NBPF11Q86T75 865 aa6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 DGKHQ86XP1 1220 aa6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 SIAH1Q8IUQ4 282 aa6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 PRPF38AQ8NAV1 312 aaKnown RBP6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 DCAF4Q8WV16 495 aa6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 SOCS4Q8WXH5 440 aa6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 KIFC2Q96AC6 838 aa6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 TRIM47Q96LD4 638 aa6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 ZSCAN10Q96SZ4 725 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 NUP88Q99567 741 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 LSG1Q9H089 658 aaKnown RBP6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 NBPF3Q9H094 633 aa6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 IL25Q9H293 177 aa6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 INCENPQ9NQS7 918 aa6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 SRRDQ9UH36 339 aa6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 PPP1R9AQ9ULJ8 1098 aa6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 MYH8P13535 1937 aa6.34□□□□□ -1.39
HMGB1P40-201ENST00000525121 TNKSO95271 1327 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 TMEM232C9JQI7 657 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 E7EWF7 191 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 IFIT3O14879 490 aaKnown RBP6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 SLC27A2O14975 620 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 SLC25A27O95847 323 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 MCM5P33992 734 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 FGD1P98174 961 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 WTAPQ15007 396 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 TMEM67Q5HYA8 995 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 KIAA1755Q5JYT7 1200 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 GPATCH4Q5T3I0 446 aaKnown RBP6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 CREB3L3Q68CJ9 461 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 PLEKHH3Q7Z736 793 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 NCAPG2Q86XI2 1143 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 SLAIN1Q8ND83 568 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 PNMA1Q8ND90 353 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 ATG4CQ96DT6 458 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 ABHD8Q96I13 439 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 NUDT12Q9BQG2 462 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 TMEM47Q9BQJ4 181 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 ZKSCAN3Q9BRR0 538 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 TEX13BQ9BXU2 312 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 ARHGAP39Q9C0H5 1083 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 SPATC1LQ9H0A9 340 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 MROH8Q9H579 483 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 IL17RBQ9NRM6 502 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 SLC5A4Q9NY91 659 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 ZSWIM5Q9P217 1185 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 RBPJLQ9UBG7 517 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 BIN2Q9UBW5 565 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 PNMA2Q9UL42 364 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 PTPN22Q9Y2R2 807 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 LAMA4Q16363 1823 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 PTPRFP10586 1907 aa6.33□□□□□ -1.4
HMGB1P40-201ENST00000525121 CCDC85CA6NKD9 419 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 VWA5AO00534 786 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 EPB41L2O43491 1005 aaKnown RBP6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 DHX16O60231 1041 aaKnown RBP6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 HMGB1P09429 215 aaKnown RBP6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 PARP1P09874 1014 aaKnown RBP6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 RGS2P41220 211 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 NOVP48745 357 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 SLC4A3P48751 1232 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 FLT3LGP49771 235 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 OAZ1P54368 228 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 UBXN2AP68543 259 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 PRKCZQ05513 592 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 KCTD2Q14681 263 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 ASPRV1Q53RT3 343 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 SYNE3Q6ZMZ3 975 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 NFXL1Q6ZNB6 911 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 KCTD1Q719H9 257 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 CATIPQ7Z7H3 387 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 TRMT44Q8IYL2 757 aaKnown RBP6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 TMTC2Q8N394 836 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 ENAHQ8N8S7 591 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 SHCBP1Q8NEM2 672 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 CHMP4CQ96CF2 233 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 TMEM87BQ96K49 555 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 MTA3Q9BTC8 594 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 TXNRD2Q9NNW7 524 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 FBXO28Q9NVF7 368 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 BTBD7Q9P203 1132 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 HPS5Q9UPZ3 1129 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 TACC3Q9Y6A5 838 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 PTCH2Q9Y6C5 1203 aa6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 GREB1LQ9C091 1923 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P40-201ENST00000525121 FRMPD2Q68DX3 1309 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 CCDC69A6NI79 296 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 SLC15A5A6NIM6 579 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 PRC1O43663 620 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms