RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 TINF2Q9BSI4 451 aa21.44■■□□□ 1.02
PVT1-220ENST00000524165 CABP5Q9NP86 173 aa21.44■■□□□ 1.02
PVT1-220ENST00000524165 SERPINB13Q9UIV8 391 aa21.44■■□□□ 1.02
PVT1-220ENST00000524165 COG5Q9UP83 839 aa21.44■■□□□ 1.02
PVT1-220ENST00000524165 ELP1O95163 1332 aa21.44■■□□□ 1.02
PVT1-220ENST00000524165 TLL1O43897 1013 aa21.43■■□□□ 1.02
PVT1-220ENST00000524165 IGSF3O75054 1194 aa21.43■■□□□ 1.02
PVT1-220ENST00000524165 ZNF865P0CJ78 1059 aaPredicted RBP21.43■■□□□ 1.02
PVT1-220ENST00000524165 POU3F3P20264 500 aaPredicted RBP21.43■■□□□ 1.02
PVT1-220ENST00000524165 SKIV2LQ15477 1246 aaKnown RBP21.43■■□□□ 1.02
PVT1-220ENST00000524165 CCSAPQ6IQ19 270 aaPredicted RBP21.43■■□□□ 1.02
PVT1-220ENST00000524165 KLHDC9Q8NEP7 349 aa21.43■■□□□ 1.02
PVT1-220ENST00000524165 IL23AQ9NPF7 189 aa21.43■■□□□ 1.02
PVT1-220ENST00000524165 DIS3Q9Y2L1 958 aaKnown RBP21.43■■□□□ 1.02
PVT1-220ENST00000524165 PARP14Q460N5 1801 aa21.43■■□□□ 1.02
PVT1-220ENST00000524165 UQCRFS1P1P0C7P4 283 aa21.42■■□□□ 1.02
PVT1-220ENST00000524165 PLS1Q14651 629 aa21.42■■□□□ 1.02
PVT1-220ENST00000524165 KCNA10Q16322 511 aa21.42■■□□□ 1.02
PVT1-220ENST00000524165 GLT1D1Q96MS3 346 aa21.42■■□□□ 1.02
PVT1-220ENST00000524165 TANGO6Q9C0B7 1094 aa21.42■■□□□ 1.02
PVT1-220ENST00000524165 SYNRGQ9UMZ2 1314 aa21.42■■□□□ 1.02
PVT1-220ENST00000524165 APBB1O00213 710 aa21.41■■□□□ 1.02
PVT1-220ENST00000524165 FGBP02675 491 aa21.41■■□□□ 1.02
PVT1-220ENST00000524165 TAL1P17542 331 aaPredicted RBP21.41■■□□□ 1.02
PVT1-220ENST00000524165 PPP2R2DQ66LE6 453 aa21.41■■□□□ 1.02
PVT1-220ENST00000524165 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.41■■□□□ 1.02
PVT1-220ENST00000524165 COL11A1P12107 1806 aaPredicted RBP21.41■■□□□ 1.02
PVT1-220ENST00000524165 PI4K2BG5E9Z4 385 aa21.4■■□□□ 1.02
PVT1-220ENST00000524165 SLC25A27O95847 323 aa21.4■■□□□ 1.02
PVT1-220ENST00000524165 DSG3P32926 999 aa21.4■■□□□ 1.02
PVT1-220ENST00000524165 MRE11P49959 708 aa21.4■■□□□ 1.02
PVT1-220ENST00000524165 SSH1Q8WYL5 1049 aa21.4■■□□□ 1.02
PVT1-220ENST00000524165 KHSRPQ92945 711 aaKnown RBP eCLIP21.4■■□□□ 1.02
PVT1-220ENST00000524165 LENG1Q96BZ8 264 aaPredicted RBP21.4■■□□□ 1.02
PVT1-220ENST00000524165 PPP1R12CQ9BZL4 782 aa21.4■■□□□ 1.02
PVT1-220ENST00000524165 FAM86C2PA6NEL3 165 aa21.39■■□□□ 1.01
PVT1-220ENST00000524165 CST5P28325 142 aaPredicted RBP21.39■■□□□ 1.01
PVT1-220ENST00000524165 GUCY1A2P33402 732 aa21.39■■□□□ 1.01
PVT1-220ENST00000524165 ZNF792Q3KQV3 632 aa21.39■■□□□ 1.01
PVT1-220ENST00000524165 CNPY2Q9Y2B0 182 aa21.39■■□□□ 1.01
PVT1-220ENST00000524165 PCDHA11Q9Y5I1 949 aa21.39■■□□□ 1.01
PVT1-220ENST00000524165 MTCH2Q9Y6C9 303 aa21.39■■□□□ 1.01
PVT1-220ENST00000524165 SMIM22K7EJ46 135 aa21.38■■□□□ 1.01
PVT1-220ENST00000524165 ARVCFO00192 962 aa21.38■■□□□ 1.01
PVT1-220ENST00000524165 TLR3O15455 904 aaKnown RBP21.38■■□□□ 1.01
PVT1-220ENST00000524165 GTPBP6O43824 516 aaPredicted RBP21.38■■□□□ 1.01
PVT1-220ENST00000524165 TTC6Q86TZ1 520 aa21.38■■□□□ 1.01
PVT1-220ENST00000524165 FAM126BQ8IXS8 530 aa21.38■■□□□ 1.01
PVT1-220ENST00000524165 MMP19Q99542 508 aa21.38■■□□□ 1.01
PVT1-220ENST00000524165 FAM184BQ9ULE4 1060 aa21.38■■□□□ 1.01
PVT1-220ENST00000524165 A0A0U1RQG5 324 aaPredicted RBP21.37■■□□□ 1.01
PVT1-220ENST00000524165 PGK2P07205 417 aa21.37■■□□□ 1.01
PVT1-220ENST00000524165 DYNLL1P63167 89 aaKnown RBP21.37■■□□□ 1.01
PVT1-220ENST00000524165 CERS3Q8IU89 383 aa21.37■■□□□ 1.01
PVT1-220ENST00000524165 PCSK9Q8NBP7 692 aaKnown RBP21.37■■□□□ 1.01
PVT1-220ENST00000524165 A0A1W2PRG0 241 aa21.36■■□□□ 1.01
PVT1-220ENST00000524165 PRR33A8MZF0 331 aa21.36■■□□□ 1.01
PVT1-220ENST00000524165 DUSP11O75319 330 aaKnown RBP21.36■■□□□ 1.01
PVT1-220ENST00000524165 CYP2C18P33260 490 aa21.36■■□□□ 1.01
PVT1-220ENST00000524165 SHMT1P34896 483 aa21.36■■□□□ 1.01
PVT1-220ENST00000524165 KCTD2Q14681 263 aa21.36■■□□□ 1.01
PVT1-220ENST00000524165 SEPT2Q15019 361 aa21.36■■□□□ 1.01
PVT1-220ENST00000524165 OTOP2Q7RTS6 562 aa21.36■■□□□ 1.01
PVT1-220ENST00000524165 MSL3Q8N5Y2 521 aaKnown RBP21.36■■□□□ 1.01
PVT1-220ENST00000524165 ATG4CQ96DT6 458 aa21.36■■□□□ 1.01
PVT1-220ENST00000524165 CDCA7LQ96GN5 454 aa21.36■■□□□ 1.01
PVT1-220ENST00000524165 FLOT1O75955 427 aa21.35■■□□□ 1.01
PVT1-220ENST00000524165 CD4P01730 458 aa21.35■■□□□ 1.01
PVT1-220ENST00000524165 ASGR1P07306 291 aa21.35■■□□□ 1.01
PVT1-220ENST00000524165 USP5P45974 858 aa21.35■■□□□ 1.01
PVT1-220ENST00000524165 RABGGTBP53611 331 aa21.35■■□□□ 1.01
PVT1-220ENST00000524165 HLA-CQ95604 372 aa21.35■■□□□ 1.01
PVT1-220ENST00000524165 SNRKQ9NRH2 765 aa21.35■■□□□ 1.01
PVT1-220ENST00000524165 BRWD1Q9NSI6 2320 aa21.35■■□□□ 1.01
PVT1-220ENST00000524165 MYADML2A6NDP7 307 aa21.34■■□□□ 1.01
PVT1-220ENST00000524165 SRGAP3O43295 1099 aa21.34■■□□□ 1.01
PVT1-220ENST00000524165 TMEM132BQ14DG7 1078 aa21.34■■□□□ 1.01
PVT1-220ENST00000524165 VTI1AQ96AJ9 217 aa21.34■■□□□ 1.01
PVT1-220ENST00000524165 SLC4A7Q9Y6M7 1214 aa21.34■■□□□ 1.01
PVT1-220ENST00000524165 CYP2E1P05181 493 aaPredicted RBP21.33■■□□□ 1.01
PVT1-220ENST00000524165 MYOGP15173 224 aa21.33■■□□□ 1.01
PVT1-220ENST00000524165 MTX1Q13505 466 aa21.33■■□□□ 1.01
PVT1-220ENST00000524165 RIOX2Q8IUF8 465 aa21.33■■□□□ 1.01
PVT1-220ENST00000524165 C6orf222P0C671 652 aaPredicted RBP21.32■■□□□ 1
PVT1-220ENST00000524165 KIAA1755Q5JYT7 1200 aa21.32■■□□□ 1
PVT1-220ENST00000524165 UPF3AQ9H1J1 476 aaKnown RBP21.32■■□□□ 1
PVT1-220ENST00000524165 HIPK3Q9H422 1215 aa21.32■■□□□ 1
PVT1-220ENST00000524165 SPC25Q9HBM1 224 aa21.32■■□□□ 1
PVT1-220ENST00000524165 ADAMTS5Q9UNA0 930 aa21.32■■□□□ 1
PVT1-220ENST00000524165 CYP7A1P22680 504 aa21.31■■□□□ 1
PVT1-220ENST00000524165 COPB2P35606 906 aa21.31■■□□□ 1
PVT1-220ENST00000524165 ALDH1L2Q3SY69 923 aa21.31■■□□□ 1
PVT1-220ENST00000524165 TTC39AQ5SRH9 613 aa21.31■■□□□ 1
PVT1-220ENST00000524165 MYH8P13535 1937 aa21.3■■□□□ 1
PVT1-220ENST00000524165 RFXAPO00287 272 aa21.3■■□□□ 1
PVT1-220ENST00000524165 SNAI1O95863 264 aaPredicted RBP21.3■■□□□ 1
PVT1-220ENST00000524165 ATP2A2P16615 1042 aaKnown RBP21.3■■□□□ 1
PVT1-220ENST00000524165 PLCD1P51178 756 aa21.3■■□□□ 1
PVT1-220ENST00000524165 GJA9P57773 515 aa21.3■■□□□ 1
PVT1-220ENST00000524165 NHLH1Q02575 133 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms