RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 SOCS4Q8WXH5 440 aa19.39■□□□□ 0.69
PABPC1-221ENST00000522720 CCDC136Q96JN2 1154 aa19.39■□□□□ 0.69
PABPC1-221ENST00000522720 NUP88Q99567 741 aaPredicted RBP19.39■□□□□ 0.69
PABPC1-221ENST00000522720 TMEM106CQ9BVX2 250 aa19.39■□□□□ 0.69
PABPC1-221ENST00000522720 RNF41Q9H4P4 317 aaPredicted RBP19.39■□□□□ 0.69
PABPC1-221ENST00000522720 BIN2Q9UBW5 565 aaPredicted RBP19.39■□□□□ 0.69
PABPC1-221ENST00000522720 CTNNA3Q9UI47 895 aa19.39■□□□□ 0.69
PABPC1-221ENST00000522720 RAD50Q92878 1312 aa19.39■□□□□ 0.69
PABPC1-221ENST00000522720 A0A0G2JMZ2 1700 aa19.38■□□□□ 0.69
PABPC1-221ENST00000522720 POTEFA5A3E0 1075 aa19.38■□□□□ 0.69
PABPC1-221ENST00000522720 NMT2O60551 498 aa19.38■□□□□ 0.69
PABPC1-221ENST00000522720 NEFLP07196 543 aa19.38■□□□□ 0.69
PABPC1-221ENST00000522720 ELNP15502 786 aa19.38■□□□□ 0.69
PABPC1-221ENST00000522720 NOVP48745 357 aa19.38■□□□□ 0.69
PABPC1-221ENST00000522720 TBC1D10CQ8IV04 446 aa19.38■□□□□ 0.69
PABPC1-221ENST00000522720 NUDT12Q9BQG2 462 aa19.38■□□□□ 0.69
PABPC1-221ENST00000522720 SPATC1LQ9H0A9 340 aa19.38■□□□□ 0.69
PABPC1-221ENST00000522720 PPP1R9AQ9ULJ8 1098 aa19.38■□□□□ 0.69
PABPC1-221ENST00000522720 RBBP6Q7Z6E9 1792 aaKnown RBP19.37■□□□□ 0.69
PABPC1-221ENST00000522720 MYCP01106 439 aaPredicted RBP19.37■□□□□ 0.69
PABPC1-221ENST00000522720 XRCC5P13010 732 aaKnown RBP19.37■□□□□ 0.69
PABPC1-221ENST00000522720 UBXN2AP68543 259 aa19.37■□□□□ 0.69
PABPC1-221ENST00000522720 MLLT1Q03111 559 aaPredicted RBP19.37■□□□□ 0.69
PABPC1-221ENST00000522720 MTFR1Q15390 333 aa19.37■□□□□ 0.69
PABPC1-221ENST00000522720 MORN1Q5T089 497 aa19.37■□□□□ 0.69
PABPC1-221ENST00000522720 SLFN13Q68D06 897 aa19.37■□□□□ 0.69
PABPC1-221ENST00000522720 SAMD1Q6SPF0 538 aaPredicted RBP19.37■□□□□ 0.69
PABPC1-221ENST00000522720 USP6NLQ92738 828 aa19.37■□□□□ 0.69
PABPC1-221ENST00000522720 MOV10L1Q9BXT6 1211 aaKnown RBP19.37■□□□□ 0.69
PABPC1-221ENST00000522720 TCP11L1Q9NUJ3 509 aa19.37■□□□□ 0.69
PABPC1-221ENST00000522720 STX8Q9UNK0 236 aa19.37■□□□□ 0.69
PABPC1-221ENST00000522720 LAMA4Q16363 1823 aa19.37■□□□□ 0.69
PABPC1-221ENST00000522720 VWA5AO00534 786 aa19.36■□□□□ 0.69
PABPC1-221ENST00000522720 CYP2B6P20813 491 aa19.36■□□□□ 0.69
PABPC1-221ENST00000522720 NT5C2P49902 561 aa19.36■□□□□ 0.69
PABPC1-221ENST00000522720 IMMTQ16891 758 aaKnown RBP19.36■□□□□ 0.69
PABPC1-221ENST00000522720 SKAP1Q86WV1 359 aa19.36■□□□□ 0.69
PABPC1-221ENST00000522720 PRPF38AQ8NAV1 312 aaKnown RBP19.36■□□□□ 0.69
PABPC1-221ENST00000522720 SHCBP1Q8NEM2 672 aa19.36■□□□□ 0.69
PABPC1-221ENST00000522720 SLF1Q9BQI6 1058 aa19.36■□□□□ 0.69
PABPC1-221ENST00000522720 CWC22Q9HCG8 908 aaKnown RBP19.36■□□□□ 0.69
PABPC1-221ENST00000522720 COL11A1P12107 1806 aaPredicted RBP19.36■□□□□ 0.69
PABPC1-221ENST00000522720 SLC15A5A6NIM6 579 aa19.35■□□□□ 0.69
PABPC1-221ENST00000522720 SGSM2O43147 1006 aa19.35■□□□□ 0.69
PABPC1-221ENST00000522720 INHAP05111 366 aa19.35■□□□□ 0.69
PABPC1-221ENST00000522720 BMP3P12645 472 aa19.35■□□□□ 0.69
PABPC1-221ENST00000522720 PTPREP23469 700 aa19.35■□□□□ 0.69
PABPC1-221ENST00000522720 TMEM132BQ14DG7 1078 aa19.35■□□□□ 0.69
PABPC1-221ENST00000522720 WDR78Q5VTH9 848 aa19.35■□□□□ 0.69
PABPC1-221ENST00000522720 GMCL1Q96IK5 515 aa19.35■□□□□ 0.69
PABPC1-221ENST00000522720 FEM1BQ9UK73 627 aa19.35■□□□□ 0.69
PABPC1-221ENST00000522720 BRCA2P51587 3418 aa19.34■□□□□ 0.69
PABPC1-221ENST00000522720 CCL5P13501 91 aa19.34■□□□□ 0.69
PABPC1-221ENST00000522720 ERCC3P19447 782 aa19.34■□□□□ 0.69
PABPC1-221ENST00000522720 EN2P19622 333 aaPredicted RBP19.34■□□□□ 0.69
PABPC1-221ENST00000522720 RGS2P41220 211 aa19.34■□□□□ 0.69
PABPC1-221ENST00000522720 MAP2K5Q13163 448 aa19.34■□□□□ 0.69
PABPC1-221ENST00000522720 PLS1Q14651 629 aa19.34■□□□□ 0.69
PABPC1-221ENST00000522720 REPS2Q8NFH8 660 aa19.34■□□□□ 0.69
PABPC1-221ENST00000522720 NKX2-3Q8TAU0 364 aa19.34■□□□□ 0.69
PABPC1-221ENST00000522720 ESR2Q92731 530 aa19.34■□□□□ 0.69
PABPC1-221ENST00000522720 MROH8Q9H579 483 aa19.34■□□□□ 0.69
PABPC1-221ENST00000522720 IVNS1ABPQ9Y6Y0 642 aa19.34■□□□□ 0.69
PABPC1-221ENST00000522720 NEDD4P46934 1319 aa19.33■□□□□ 0.69
PABPC1-221ENST00000522720 STRNO43815 780 aa19.33■□□□□ 0.68
PABPC1-221ENST00000522720 SLC25A27O95847 323 aa19.33■□□□□ 0.68
PABPC1-221ENST00000522720 HMGCRP04035 888 aa19.33■□□□□ 0.68
PABPC1-221ENST00000522720 TOP1P11387 765 aaKnown RBP19.33■□□□□ 0.68
PABPC1-221ENST00000522720 MCCP23508 829 aa19.33■□□□□ 0.68
PABPC1-221ENST00000522720 PTH1RQ03431 593 aa19.33■□□□□ 0.68
PABPC1-221ENST00000522720 GRB14Q14449 540 aa19.33■□□□□ 0.68
PABPC1-221ENST00000522720 BMP2KLQ5H9B9 411 aa19.33■□□□□ 0.68
PABPC1-221ENST00000522720 TRMT44Q8IYL2 757 aaKnown RBP19.33■□□□□ 0.68
PABPC1-221ENST00000522720 TTC14Q96N46 770 aa19.33■□□□□ 0.68
PABPC1-221ENST00000522720 ZNF214Q9UL59 606 aaPredicted RBP19.33■□□□□ 0.68
PABPC1-221ENST00000522720 GJB1P08034 283 aa19.32■□□□□ 0.68
PABPC1-221ENST00000522720 STAT3P40763 770 aa19.32■□□□□ 0.68
PABPC1-221ENST00000522720 SLC1A4P43007 532 aa19.32■□□□□ 0.68
PABPC1-221ENST00000522720 NCAPG2Q86XI2 1143 aa19.32■□□□□ 0.68
PABPC1-221ENST00000522720 RIOX2Q8IUF8 465 aa19.32■□□□□ 0.68
PABPC1-221ENST00000522720 TRIB2Q92519 343 aa19.32■□□□□ 0.68
PABPC1-221ENST00000522720 TMEM47Q9BQJ4 181 aa19.32■□□□□ 0.68
PABPC1-221ENST00000522720 RNF208Q9H0X6 261 aa19.32■□□□□ 0.68
PABPC1-221ENST00000522720 UNC93B1Q9H1C4 597 aa19.32■□□□□ 0.68
PABPC1-221ENST00000522720 PDE4DIPQ5VU43 2346 aa19.31■□□□□ 0.68
PABPC1-221ENST00000522720 TMEM232C9JQI7 657 aa19.31■□□□□ 0.68
PABPC1-221ENST00000522720 HOXC6P09630 235 aa19.31■□□□□ 0.68
PABPC1-221ENST00000522720 RCSD1Q6JBY9 416 aa19.31■□□□□ 0.68
PABPC1-221ENST00000522720 CHURC1Q8WUH1 139 aa19.31■□□□□ 0.68
PABPC1-221ENST00000522720 KIFC2Q96AC6 838 aa19.31■□□□□ 0.68
PABPC1-221ENST00000522720 APBA2Q99767 749 aa19.31■□□□□ 0.68
PABPC1-221ENST00000522720 CNNM2Q9H8M5 875 aa19.31■□□□□ 0.68
PABPC1-221ENST00000522720 U3KPZ7 1027 aaPredicted RBP19.31■□□□□ 0.68
PABPC1-221ENST00000522720 ZNFX1Q9P2E3 1918 aaKnown RBP19.31■□□□□ 0.68
PABPC1-221ENST00000522720 B4E1Z4 1266 aa19.3■□□□□ 0.68
PABPC1-221ENST00000522720 ATP2A1O14983 1001 aa19.3■□□□□ 0.68
PABPC1-221ENST00000522720 PLA2G6O60733 806 aa19.3■□□□□ 0.68
PABPC1-221ENST00000522720 ZBED4O75132 1171 aa19.3■□□□□ 0.68
PABPC1-221ENST00000522720 KDM4AO75164 1064 aa19.3■□□□□ 0.68
PABPC1-221ENST00000522720 FDX1P10109 184 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms