RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 CKAP4Q07065 602 aaKnown RBP13.43□□□□□ -0.26
SPIDR-217ENST00000522117 C2orf54Q08AI8 447 aa13.43□□□□□ -0.26
SPIDR-217ENST00000522117 LONRF3Q496Y0 759 aa13.43□□□□□ -0.26
SPIDR-217ENST00000522117 PPP1R15BQ5SWA1 713 aa13.43□□□□□ -0.26
SPIDR-217ENST00000522117 METTL16Q86W50 562 aaKnown RBP13.43□□□□□ -0.26
SPIDR-217ENST00000522117 CCT6BQ92526 530 aa13.43□□□□□ -0.26
SPIDR-217ENST00000522117 HVCN1Q96D96 273 aa13.43□□□□□ -0.26
SPIDR-217ENST00000522117 NOP53Q9NZM5 478 aaKnown RBP13.43□□□□□ -0.26
SPIDR-217ENST00000522117 HPSEQ9Y251 543 aa13.43□□□□□ -0.26
SPIDR-217ENST00000522117 ZNF233A6NK53 670 aa13.42□□□□□ -0.26
SPIDR-217ENST00000522117 DIAPH2O60879 1101 aa13.42□□□□□ -0.26
SPIDR-217ENST00000522117 ATP2C2O75185 946 aa13.42□□□□□ -0.26
SPIDR-217ENST00000522117 SYKP43405 635 aa13.42□□□□□ -0.26
SPIDR-217ENST00000522117 G3BP1Q13283 466 aaKnown RBP eCLIP13.42□□□□□ -0.26
SPIDR-217ENST00000522117 MCM10Q7L590 875 aa13.42□□□□□ -0.26
SPIDR-217ENST00000522117 CCHCR1Q8TD31 782 aa13.42□□□□□ -0.26
SPIDR-217ENST00000522117 AGAP11Q8TF27 550 aa13.42□□□□□ -0.26
SPIDR-217ENST00000522117 SEC16BQ96JE7 1060 aa13.42□□□□□ -0.26
SPIDR-217ENST00000522117 NDST4Q9H3R1 872 aa13.42□□□□□ -0.26
SPIDR-217ENST00000522117 PIDD1Q9HB75 910 aa13.42□□□□□ -0.26
SPIDR-217ENST00000522117 TMEM165Q9HC07 324 aa13.42□□□□□ -0.26
SPIDR-217ENST00000522117 SAMSN1Q9NSI8 373 aaKnown RBP13.42□□□□□ -0.26
SPIDR-217ENST00000522117 MED23Q9ULK4 1368 aa13.42□□□□□ -0.26
SPIDR-217ENST00000522117 PTPRUQ92729 1446 aa13.42□□□□□ -0.26
SPIDR-217ENST00000522117 RIMS1Q86UR5 1692 aaKnown RBP13.42□□□□□ -0.26
SPIDR-217ENST00000522117 SMAPO00193 183 aa13.42□□□□□ -0.26
SPIDR-217ENST00000522117 NUGGCQ68CJ6 796 aa13.42□□□□□ -0.26
SPIDR-217ENST00000522117 PPP4R3AQ6IN85 833 aa13.42□□□□□ -0.26
SPIDR-217ENST00000522117 CCDC170Q8IYT3 715 aa13.42□□□□□ -0.26
SPIDR-217ENST00000522117 CAVIN3Q969G5 261 aa13.42□□□□□ -0.26
SPIDR-217ENST00000522117 NEK1Q96PY6 1258 aa13.42□□□□□ -0.26
SPIDR-217ENST00000522117 LRRC2Q9BYS8 371 aa13.42□□□□□ -0.26
SPIDR-217ENST00000522117 DMGDHQ9UI17 866 aaKnown RBP13.42□□□□□ -0.26
SPIDR-217ENST00000522117 EMILIN1Q9Y6C2 1016 aa13.42□□□□□ -0.26
SPIDR-217ENST00000522117 CPS1P31327 1500 aa13.42□□□□□ -0.26
SPIDR-217ENST00000522117 AKAP12Q02952 1782 aa13.42□□□□□ -0.26
SPIDR-217ENST00000522117 DPPA5A6NC42 116 aa13.41□□□□□ -0.26
SPIDR-217ENST00000522117 SMIM24O75264 130 aa13.41□□□□□ -0.26
SPIDR-217ENST00000522117 ALDH1L1O75891 902 aa13.41□□□□□ -0.26
SPIDR-217ENST00000522117 MYBL1P10243 752 aa13.41□□□□□ -0.26
SPIDR-217ENST00000522117 CASP14P31944 242 aa13.41□□□□□ -0.26
SPIDR-217ENST00000522117 FXR1P51114 621 aaKnown RBP eCLIP13.41□□□□□ -0.26
SPIDR-217ENST00000522117 CCDC125Q86Z20 511 aa13.41□□□□□ -0.26
SPIDR-217ENST00000522117 TRMT44Q8IYL2 757 aaKnown RBP13.41□□□□□ -0.26
SPIDR-217ENST00000522117 ENOX1Q8TC92 643 aaKnown RBP13.41□□□□□ -0.26
SPIDR-217ENST00000522117 PPANQ9NQ55 473 aaKnown RBP13.41□□□□□ -0.26
SPIDR-217ENST00000522117 ECHDC1Q9NTX5 307 aa13.41□□□□□ -0.26
SPIDR-217ENST00000522117 REXO2Q9Y3B8 237 aaKnown RBP13.41□□□□□ -0.26
SPIDR-217ENST00000522117 PCDHA5Q9Y5H7 936 aa13.41□□□□□ -0.26
SPIDR-217ENST00000522117 UBTFL1P0CB47 393 aaPredicted RBP13.41□□□□□ -0.26
SPIDR-217ENST00000522117 ALDH1B1P30837 517 aa13.41□□□□□ -0.26
SPIDR-217ENST00000522117 SCNN1BP51168 640 aa13.41□□□□□ -0.26
SPIDR-217ENST00000522117 EPHB4P54760 987 aa13.41□□□□□ -0.26
SPIDR-217ENST00000522117 PPP1R7Q15435 360 aa13.41□□□□□ -0.26
SPIDR-217ENST00000522117 RBM17Q96I25 401 aaKnown RBP13.41□□□□□ -0.26
SPIDR-217ENST00000522117 FAM167BQ9BTA0 163 aa13.41□□□□□ -0.26
SPIDR-217ENST00000522117 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.41□□□□□ -0.267e-6■■■■□ 20.5
SPIDR-217ENST00000522117 ZRANB1Q9UGI0 708 aa13.41□□□□□ -0.26
SPIDR-217ENST00000522117 WWC3Q9ULE0 1092 aa13.41□□□□□ -0.26
SPIDR-217ENST00000522117 ZMYM6O95789 1325 aa13.41□□□□□ -0.26
SPIDR-217ENST00000522117 GMNCA6NCL1 334 aa13.41□□□□□ -0.26
SPIDR-217ENST00000522117 C5orf60A6NFR6 353 aa13.41□□□□□ -0.26
SPIDR-217ENST00000522117 ZNF185O15231 689 aa13.41□□□□□ -0.26
SPIDR-217ENST00000522117 ITGB3BPQ13352 177 aaPredicted RBP13.41□□□□□ -0.26
SPIDR-217ENST00000522117 RRP12Q5JTH9 1297 aaKnown RBP13.41□□□□□ -0.26
SPIDR-217ENST00000522117 EMBQ6PCB8 327 aa13.41□□□□□ -0.26
SPIDR-217ENST00000522117 SDCCAG8Q86SQ7 713 aaPredicted RBP13.41□□□□□ -0.26
SPIDR-217ENST00000522117 ZNF589Q86UQ0 364 aaPredicted RBP13.41□□□□□ -0.26
SPIDR-217ENST00000522117 IQCKQ8N0W5 287 aa13.41□□□□□ -0.26
SPIDR-217ENST00000522117 SLF1Q9BQI6 1058 aa13.41□□□□□ -0.26
SPIDR-217ENST00000522117 OSBPL1AQ9BXW6 950 aa13.41□□□□□ -0.26
SPIDR-217ENST00000522117 MMADHCQ9H3L0 296 aaPredicted RBP13.41□□□□□ -0.26
SPIDR-217ENST00000522117 GUCA1BQ9UMX6 200 aa13.41□□□□□ -0.26
SPIDR-217ENST00000522117 MON2Q7Z3U7 1717 aa13.4□□□□□ -0.26
SPIDR-217ENST00000522117 ITSN1Q15811 1721 aa13.4□□□□□ -0.26
SPIDR-217ENST00000522117 GYPCP04921 128 aa13.4□□□□□ -0.26
SPIDR-217ENST00000522117 POLR3DP05423 398 aaPredicted RBP13.4□□□□□ -0.26
SPIDR-217ENST00000522117 ALADP13716 330 aa13.4□□□□□ -0.26
SPIDR-217ENST00000522117 LRRC23Q53EV4 343 aaPredicted RBP13.4□□□□□ -0.26
SPIDR-217ENST00000522117 CCDC178Q5BJE1 867 aa13.4□□□□□ -0.26
SPIDR-217ENST00000522117 USPL1Q5W0Q7 1092 aa13.4□□□□□ -0.26
SPIDR-217ENST00000522117 TMTC1Q8IUR5 882 aa13.4□□□□□ -0.26
SPIDR-217ENST00000522117 MMGT1Q8N4V1 131 aa13.4□□□□□ -0.26
SPIDR-217ENST00000522117 RUBCNQ92622 972 aa13.4□□□□□ -0.26
SPIDR-217ENST00000522117 P3H4Q92791 437 aa13.4□□□□□ -0.26
SPIDR-217ENST00000522117 PANK4Q9NVE7 773 aa13.4□□□□□ -0.26
SPIDR-217ENST00000522117 MAP2P11137 1827 aaKnown RBP13.4□□□□□ -0.26
SPIDR-217ENST00000522117 GPR75-ASB3A0A0A6YYF3 556 aa13.4□□□□□ -0.27
SPIDR-217ENST00000522117 CYP27B1O15528 508 aa13.4□□□□□ -0.27
SPIDR-217ENST00000522117 FLIIQ13045 1269 aa13.4□□□□□ -0.27
SPIDR-217ENST00000522117 CUL3Q13618 768 aa13.4□□□□□ -0.27
SPIDR-217ENST00000522117 KRT32Q14532 448 aa13.4□□□□□ -0.27
SPIDR-217ENST00000522117 GLE1Q53GS7 698 aaKnown RBP13.4□□□□□ -0.27
SPIDR-217ENST00000522117 OTUD7BQ6GQQ9 843 aa13.4□□□□□ -0.27
SPIDR-217ENST00000522117 NUTM2AQ8IVF1 878 aaPredicted RBP13.4□□□□□ -0.27
SPIDR-217ENST00000522117 JAKMIP2Q96AA8 810 aa13.4□□□□□ -0.27
SPIDR-217ENST00000522117 AIDAQ96BJ3 306 aa13.4□□□□□ -0.27
SPIDR-217ENST00000522117 CCDC51Q96ER9 411 aa13.4□□□□□ -0.27
SPIDR-217ENST00000522117 LRRC1Q9BTT6 524 aa13.4□□□□□ -0.27
SPIDR-217ENST00000522117 KCNMB3Q9NPA1 279 aa13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms