RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 F5H6K3 240 aa20.29■□□□□ 0.84
SQLE-205ENST00000521232 HOXC6P09630 235 aa20.29■□□□□ 0.84
SQLE-205ENST00000521232 ZKSCAN1P17029 563 aaPredicted RBP20.29■□□□□ 0.84
SQLE-205ENST00000521232 KLRC3Q07444 240 aa20.29■□□□□ 0.84
SQLE-205ENST00000521232 CCL14Q16627 93 aa20.29■□□□□ 0.84
SQLE-205ENST00000521232 CEP95Q96GE4 821 aa20.29■□□□□ 0.84
SQLE-205ENST00000521232 SYNPO2Q9UMS6 1093 aa20.29■□□□□ 0.84
SQLE-205ENST00000521232 MYH4Q9Y623 1939 aa20.29■□□□□ 0.84
SQLE-205ENST00000521232 A0A0D9SFI3 127 aa20.28■□□□□ 0.84
SQLE-205ENST00000521232 PRKAR2AP13861 404 aaKnown RBP20.28■□□□□ 0.84
SQLE-205ENST00000521232 ERCC3P19447 782 aa20.28■□□□□ 0.84
SQLE-205ENST00000521232 CACNB2Q08289 660 aaPredicted RBP20.28■□□□□ 0.84
SQLE-205ENST00000521232 TMEM132BQ14DG7 1078 aa20.28■□□□□ 0.84
SQLE-205ENST00000521232 FAM83BQ5T0W9 1011 aa20.28■□□□□ 0.84
SQLE-205ENST00000521232 RILPL2Q969X0 211 aa20.28■□□□□ 0.84
SQLE-205ENST00000521232 MROH8Q9H579 483 aa20.28■□□□□ 0.84
SQLE-205ENST00000521232 FBXO28Q9NVF7 368 aa20.28■□□□□ 0.84
SQLE-205ENST00000521232 ANAPC4Q9UJX5 808 aa20.28■□□□□ 0.84
SQLE-205ENST00000521232 PPP1R9AQ9ULJ8 1098 aa20.28■□□□□ 0.84
SQLE-205ENST00000521232 PLIN4Q96Q06 1357 aa20.28■□□□□ 0.84
SQLE-205ENST00000521232 RAD21O60216 631 aa20.27■□□□□ 0.84
SQLE-205ENST00000521232 FARP2O94887 1054 aaPredicted RBP20.27■□□□□ 0.84
SQLE-205ENST00000521232 TTLL1O95922 423 aa20.27■□□□□ 0.84
SQLE-205ENST00000521232 NDUFB10O96000 172 aa20.27■□□□□ 0.84
SQLE-205ENST00000521232 TSPY3P0CV98 308 aa20.27■□□□□ 0.84
SQLE-205ENST00000521232 TSPY8P0CW00 308 aa20.27■□□□□ 0.84
SQLE-205ENST00000521232 TFAP4Q01664 338 aa20.27■□□□□ 0.84
SQLE-205ENST00000521232 FAM47AQ5JRC9 791 aa20.27■□□□□ 0.84
SQLE-205ENST00000521232 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.27■□□□□ 0.84
SQLE-205ENST00000521232 COL11A1P12107 1806 aaPredicted RBP20.27■□□□□ 0.84
SQLE-205ENST00000521232 VWA5AO00534 786 aa20.26■□□□□ 0.83
SQLE-205ENST00000521232 FGAP02671 866 aa20.26■□□□□ 0.83
SQLE-205ENST00000521232 SDSP20132 328 aa20.26■□□□□ 0.83
SQLE-205ENST00000521232 CTDSPL2Q05D32 466 aa20.26■□□□□ 0.83
SQLE-205ENST00000521232 NMIQ13287 307 aaPredicted RBP20.26■□□□□ 0.83
SQLE-205ENST00000521232 PLS1Q14651 629 aa20.26■□□□□ 0.83
SQLE-205ENST00000521232 ANKLE1Q8NAG6 615 aa20.26■□□□□ 0.83
SQLE-205ENST00000521232 NPLOC4Q8TAT6 608 aa20.26■□□□□ 0.83
SQLE-205ENST00000521232 FLRT1Q9NZU1 646 aa20.26■□□□□ 0.83
SQLE-205ENST00000521232 ZNFX1Q9P2E3 1918 aaKnown RBP20.25■□□□□ 0.83
SQLE-205ENST00000521232 SLC25A27O95847 323 aa20.25■□□□□ 0.83
SQLE-205ENST00000521232 IGHA2P01877 340 aa20.25■□□□□ 0.83
SQLE-205ENST00000521232 FGRP09769 529 aa20.25■□□□□ 0.83
SQLE-205ENST00000521232 HSPD1P10809 573 aaKnown RBP20.25■□□□□ 0.83
SQLE-205ENST00000521232 ADORA2AP29274 412 aa20.25■□□□□ 0.83
SQLE-205ENST00000521232 SAMD1Q6SPF0 538 aaPredicted RBP20.25■□□□□ 0.83
SQLE-205ENST00000521232 ABRAQ8N0Z2 381 aa20.25■□□□□ 0.83
SQLE-205ENST00000521232 GMCL1P1Q8NEA9 526 aa20.25■□□□□ 0.83
SQLE-205ENST00000521232 REPS2Q8NFH8 660 aa20.25■□□□□ 0.83
SQLE-205ENST00000521232 NUP88Q99567 741 aaPredicted RBP20.25■□□□□ 0.83
SQLE-205ENST00000521232 HTATIP2Q9BUP3 242 aa20.25■□□□□ 0.83
SQLE-205ENST00000521232 INCENPQ9NQS7 918 aa20.25■□□□□ 0.83
SQLE-205ENST00000521232 TACC3Q9Y6A5 838 aa20.25■□□□□ 0.83
SQLE-205ENST00000521232 STAT3P40763 770 aa20.24■□□□□ 0.83
SQLE-205ENST00000521232 MFSD14CQ5VZR4 134 aa20.24■□□□□ 0.83
SQLE-205ENST00000521232 DPP9Q86TI2 863 aa20.24■□□□□ 0.83
SQLE-205ENST00000521232 ZNF589Q86UQ0 364 aaPredicted RBP20.24■□□□□ 0.83
SQLE-205ENST00000521232 NCAPG2Q86XI2 1143 aa20.24■□□□□ 0.83
SQLE-205ENST00000521232 RIOX2Q8IUF8 465 aa20.24■□□□□ 0.83
SQLE-205ENST00000521232 PRPF38AQ8NAV1 312 aaKnown RBP20.24■□□□□ 0.83
SQLE-205ENST00000521232 SLF1Q9BQI6 1058 aa20.24■□□□□ 0.83
SQLE-205ENST00000521232 ZNF214Q9UL59 606 aaPredicted RBP20.24■□□□□ 0.83
SQLE-205ENST00000521232 OGDHLQ9ULD0 1010 aa20.24■□□□□ 0.83
SQLE-205ENST00000521232 ZNF236Q9UL36 1845 aa20.24■□□□□ 0.83
SQLE-205ENST00000521232 ORC4O43929 436 aa20.23■□□□□ 0.83
SQLE-205ENST00000521232 CCND3P30281 292 aaPredicted RBP20.23■□□□□ 0.83
SQLE-205ENST00000521232 PPP4R3BQ5MIZ7 849 aa20.23■□□□□ 0.83
SQLE-205ENST00000521232 DPF3Q92784 378 aa20.23■□□□□ 0.83
SQLE-205ENST00000521232 ZMYM6O95789 1325 aa20.23■□□□□ 0.83
SQLE-205ENST00000521232 CCDC171Q6TFL3 1326 aa20.23■□□□□ 0.83
SQLE-205ENST00000521232 TSPY2A6NKD2 308 aa20.22■□□□□ 0.83
SQLE-205ENST00000521232 COBLO75128 1261 aa20.22■□□□□ 0.83
SQLE-205ENST00000521232 FCER1AP12319 257 aa20.22■□□□□ 0.83
SQLE-205ENST00000521232 MNX1P50219 401 aaPredicted RBP20.22■□□□□ 0.83
SQLE-205ENST00000521232 OLFML2BQ68BL8 750 aa20.22■□□□□ 0.83
SQLE-205ENST00000521232 LHX8Q68G74 356 aa20.22■□□□□ 0.83
SQLE-205ENST00000521232 LRRC47Q8N1G4 583 aaKnown RBP20.22■□□□□ 0.83
SQLE-205ENST00000521232 PAWRQ96IZ0 340 aaKnown RBP20.22■□□□□ 0.83
SQLE-205ENST00000521232 IL17RBQ9NRM6 502 aa20.22■□□□□ 0.83
SQLE-205ENST00000521232 SLC5A4Q9NY91 659 aa20.22■□□□□ 0.83
SQLE-205ENST00000521232 COPB2P35606 906 aa20.21■□□□□ 0.83
SQLE-205ENST00000521232 NOVP48745 357 aa20.21■□□□□ 0.83
SQLE-205ENST00000521232 MFAP1P55081 439 aaKnown RBP20.21■□□□□ 0.83
SQLE-205ENST00000521232 IRX6P78412 446 aaPredicted RBP20.21■□□□□ 0.83
SQLE-205ENST00000521232 SLFN13Q68D06 897 aa20.21■□□□□ 0.83
SQLE-205ENST00000521232 NECAB2Q7Z6G3 386 aa20.21■□□□□ 0.83
SQLE-205ENST00000521232 FEM1BQ9UK73 627 aa20.21■□□□□ 0.83
SQLE-205ENST00000521232 HIP1O00291 1037 aa20.2■□□□□ 0.82
SQLE-205ENST00000521232 ATP2A1O14983 1001 aa20.2■□□□□ 0.82
SQLE-205ENST00000521232 RANBP6O60518 1105 aaKnown RBP20.2■□□□□ 0.82
SQLE-205ENST00000521232 BMP3P12645 472 aa20.2■□□□□ 0.82
SQLE-205ENST00000521232 PDE4AP27815 886 aa20.2■□□□□ 0.82
SQLE-205ENST00000521232 CYP2C19P33261 490 aa20.2■□□□□ 0.82
SQLE-205ENST00000521232 DIS3LQ8TF46 1054 aaKnown RBP20.2■□□□□ 0.82
SQLE-205ENST00000521232 H0YGN5 161 aa20.19■□□□□ 0.82
SQLE-205ENST00000521232 CWC27Q6UX04 472 aaKnown RBP20.19■□□□□ 0.82
SQLE-205ENST00000521232 GMCL1Q96IK5 515 aa20.19■□□□□ 0.82
SQLE-205ENST00000521232 TEX13BQ9BXU2 312 aa20.19■□□□□ 0.82
SQLE-205ENST00000521232 NBPF3Q9H094 633 aa20.19■□□□□ 0.82
SQLE-205ENST00000521232 SLC38A10Q9HBR0 1119 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms