RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.17■□□□□ 0.5
CSMD1-207ENST00000520451 SENP6Q9GZR1 1112 aaPredicted RBP18.17■□□□□ 0.5
CSMD1-207ENST00000520451 MKNK2Q9HBH9 465 aa18.17■□□□□ 0.5
CSMD1-207ENST00000520451 FBXO28Q9NVF7 368 aa18.17■□□□□ 0.5
CSMD1-207ENST00000520451 DNAH12Q6ZR08 3092 aa18.17■□□□□ 0.5
CSMD1-207ENST00000520451 GPAA1O43292 621 aa18.16■□□□□ 0.5
CSMD1-207ENST00000520451 SLC25A27O95847 323 aa18.16■□□□□ 0.5
CSMD1-207ENST00000520451 ZFYP08048 801 aaPredicted RBP18.16■□□□□ 0.5
CSMD1-207ENST00000520451 FCER1AP12319 257 aa18.16■□□□□ 0.5
CSMD1-207ENST00000520451 RASA1P20936 1047 aa18.16■□□□□ 0.5
CSMD1-207ENST00000520451 FAM83BQ5T0W9 1011 aa18.16■□□□□ 0.5
CSMD1-207ENST00000520451 LRCH3Q96II8 777 aa18.16■□□□□ 0.5
CSMD1-207ENST00000520451 ROBO3Q96MS0 1386 aa18.16■□□□□ 0.5
CSMD1-207ENST00000520451 DNM1LO00429 736 aa18.15■□□□□ 0.5
CSMD1-207ENST00000520451 TDO2P48775 406 aa18.15■□□□□ 0.5
CSMD1-207ENST00000520451 PPP1R9AQ9ULJ8 1098 aa18.15■□□□□ 0.5
CSMD1-207ENST00000520451 ADAMTS5Q9UNA0 930 aa18.15■□□□□ 0.5
CSMD1-207ENST00000520451 M0R2C6 588 aa18.14■□□□□ 0.49
CSMD1-207ENST00000520451 VWA5AO00534 786 aa18.14■□□□□ 0.49
CSMD1-207ENST00000520451 APPP05067 770 aa18.14■□□□□ 0.49
CSMD1-207ENST00000520451 GNAT2P19087 354 aa18.14■□□□□ 0.49
CSMD1-207ENST00000520451 ATN1P54259 1190 aaPredicted RBP18.14■□□□□ 0.49
CSMD1-207ENST00000520451 LRRFIP1Q32MZ4 808 aaKnown RBP18.14■□□□□ 0.49
CSMD1-207ENST00000520451 GJC2Q5T442 439 aaPredicted RBP18.14■□□□□ 0.49
CSMD1-207ENST00000520451 ANO1Q5XXA6 986 aa18.14■□□□□ 0.49
CSMD1-207ENST00000520451 RIOX2Q8IUF8 465 aa18.14■□□□□ 0.49
CSMD1-207ENST00000520451 MAML3Q96JK9 1138 aa18.14■□□□□ 0.49
CSMD1-207ENST00000520451 MMP19Q99542 508 aa18.14■□□□□ 0.49
CSMD1-207ENST00000520451 UBE2OQ9C0C9 1292 aaKnown RBP18.14■□□□□ 0.49
CSMD1-207ENST00000520451 EPB41L4AQ9HCS5 686 aaPredicted RBP18.14■□□□□ 0.49
CSMD1-207ENST00000520451 PCDHB15Q9Y5E8 787 aa18.14■□□□□ 0.49
CSMD1-207ENST00000520451 PARP14Q460N5 1801 aa18.14■□□□□ 0.49
CSMD1-207ENST00000520451 SEPT4O43236 478 aa18.13■□□□□ 0.49
CSMD1-207ENST00000520451 STAT3P40763 770 aa18.13■□□□□ 0.49
CSMD1-207ENST00000520451 PRAMEF19Q5SWL8 479 aa18.13■□□□□ 0.49
CSMD1-207ENST00000520451 ARRDC4Q8NCT1 418 aa18.13■□□□□ 0.49
CSMD1-207ENST00000520451 NUP88Q99567 741 aaPredicted RBP18.13■□□□□ 0.49
CSMD1-207ENST00000520451 NYAP2Q9P242 653 aa18.13■□□□□ 0.49
CSMD1-207ENST00000520451 TTC41PQ6P2S7 1318 aa18.13■□□□□ 0.49
CSMD1-207ENST00000520451 GREB1LQ9C091 1923 aaPredicted RBP18.12■□□□□ 0.49
CSMD1-207ENST00000520451 ERC2O15083 957 aa18.12■□□□□ 0.49
CSMD1-207ENST00000520451 MYCNP04198 464 aaPredicted RBP18.12■□□□□ 0.49
CSMD1-207ENST00000520451 PGK2P07205 417 aa18.12■□□□□ 0.49
CSMD1-207ENST00000520451 KCTD2Q14681 263 aa18.12■□□□□ 0.49
CSMD1-207ENST00000520451 TDHQ8IZJ6 230 aa18.12■□□□□ 0.49
CSMD1-207ENST00000520451 SLF1Q9BQI6 1058 aa18.12■□□□□ 0.49
CSMD1-207ENST00000520451 ZNF287Q9HBT7 754 aa18.12■□□□□ 0.49
CSMD1-207ENST00000520451 ZNF214Q9UL59 606 aaPredicted RBP18.12■□□□□ 0.49
CSMD1-207ENST00000520451 KBTBD13C9JR72 458 aa18.11■□□□□ 0.49
CSMD1-207ENST00000520451 PRDM1O75626 825 aa18.11■□□□□ 0.49
CSMD1-207ENST00000520451 NDUFB10O96000 172 aa18.11■□□□□ 0.49
CSMD1-207ENST00000520451 COPB2P35606 906 aa18.11■□□□□ 0.49
CSMD1-207ENST00000520451 MDM2Q00987 491 aaPredicted RBP18.11■□□□□ 0.49
CSMD1-207ENST00000520451 REPS2Q8NFH8 660 aa18.11■□□□□ 0.49
CSMD1-207ENST00000520451 PI4K2BQ8TCG2 481 aa18.11■□□□□ 0.49
CSMD1-207ENST00000520451 OTUD7AQ8TE49 926 aaPredicted RBP18.11■□□□□ 0.49
CSMD1-207ENST00000520451 FSD1Q9BTV5 496 aa18.11■□□□□ 0.49
CSMD1-207ENST00000520451 CLIP2Q9UDT6 1046 aa18.11■□□□□ 0.49
CSMD1-207ENST00000520451 COL11A1P12107 1806 aaPredicted RBP18.11■□□□□ 0.49
CSMD1-207ENST00000520451 PATL2C9JE40 543 aaKnown RBP18.1■□□□□ 0.49
CSMD1-207ENST00000520451 F5H6K3 240 aa18.1■□□□□ 0.49
CSMD1-207ENST00000520451 RTP1P59025 263 aa18.1■□□□□ 0.49
CSMD1-207ENST00000520451 KLRC3Q07444 240 aa18.1■□□□□ 0.49
CSMD1-207ENST00000520451 LRIT3Q3SXY7 679 aa18.1■□□□□ 0.49
CSMD1-207ENST00000520451 IFNL3Q8IZI9 196 aa18.1■□□□□ 0.49
CSMD1-207ENST00000520451 ZNF444Q8N0Y2 327 aaPredicted RBP18.1■□□□□ 0.49
CSMD1-207ENST00000520451 NACAP1Q9BZK3 213 aa18.1■□□□□ 0.49
CSMD1-207ENST00000520451 IGKV6D-41A0A0C4DH26 115 aa18.09■□□□□ 0.49
CSMD1-207ENST00000520451 ZNF792Q3KQV3 632 aa18.09■□□□□ 0.49
CSMD1-207ENST00000520451 FAM47AQ5JRC9 791 aa18.09■□□□□ 0.49
CSMD1-207ENST00000520451 CEP95Q96GE4 821 aa18.09■□□□□ 0.49
CSMD1-207ENST00000520451 SEC62Q99442 399 aaKnown RBP18.09■□□□□ 0.49
CSMD1-207ENST00000520451 TEX13BQ9BXU2 312 aa18.09■□□□□ 0.49
CSMD1-207ENST00000520451 NRBP1Q9UHY1 535 aa18.09■□□□□ 0.49
CSMD1-207ENST00000520451 ATP11BQ9Y2G3 1177 aa18.09■□□□□ 0.49
CSMD1-207ENST00000520451 MX1P20591 662 aa18.08■□□□□ 0.48
CSMD1-207ENST00000520451 RRP1P56182 461 aaKnown RBP18.08■□□□□ 0.48
CSMD1-207ENST00000520451 LRRC41Q15345 812 aa18.08■□□□□ 0.48
CSMD1-207ENST00000520451 SNRNP48Q6IEG0 339 aaKnown RBP18.08■□□□□ 0.48
CSMD1-207ENST00000520451 PRPF38AQ8NAV1 312 aaKnown RBP18.08■□□□□ 0.48
CSMD1-207ENST00000520451 LBHD1Q9BQE6 289 aaPredicted RBP18.08■□□□□ 0.48
CSMD1-207ENST00000520451 TINF2Q9BSI4 451 aa18.08■□□□□ 0.48
CSMD1-207ENST00000520451 NAPBQ9H115 298 aa18.08■□□□□ 0.48
CSMD1-207ENST00000520451 MTMR4Q9NYA4 1195 aa18.08■□□□□ 0.48
CSMD1-207ENST00000520451 PRKAG2Q9UGJ0 569 aa18.08■□□□□ 0.48
CSMD1-207ENST00000520451 DIS3Q9Y2L1 958 aaKnown RBP18.08■□□□□ 0.48
CSMD1-207ENST00000520451 CTDP1Q9Y5B0 961 aaPredicted RBP18.08■□□□□ 0.48
CSMD1-207ENST00000520451 TTLL1O95922 423 aa18.07■□□□□ 0.48
CSMD1-207ENST00000520451 TSPY3P0CV98 308 aa18.07■□□□□ 0.48
CSMD1-207ENST00000520451 TSPY8P0CW00 308 aa18.07■□□□□ 0.48
CSMD1-207ENST00000520451 SLC4A3P48751 1232 aa18.07■□□□□ 0.48
CSMD1-207ENST00000520451 PDE4BQ07343 736 aa18.07■□□□□ 0.48
CSMD1-207ENST00000520451 ZMYM1Q5SVZ6 1142 aa18.07■□□□□ 0.48
CSMD1-207ENST00000520451 GPR153Q6NV75 609 aa18.07■□□□□ 0.48
CSMD1-207ENST00000520451 SLC39A5Q6ZMH5 540 aa18.07■□□□□ 0.48
CSMD1-207ENST00000520451 LRRC47Q8N1G4 583 aaKnown RBP18.07■□□□□ 0.48
CSMD1-207ENST00000520451 KIFC2Q96AC6 838 aa18.07■□□□□ 0.48
CSMD1-207ENST00000520451 XPNPEP3Q9NQH7 507 aa18.07■□□□□ 0.48
CSMD1-207ENST00000520451 ZBED4O75132 1171 aa18.06■□□□□ 0.48
CSMD1-207ENST00000520451 SLC3A2P08195 630 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms