RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 SLC39A5Q6ZMH5 540 aa6.09□□□□□ -1.43
SDCBP-207ENST00000520168 CYP4X1Q8N118 509 aa6.09□□□□□ -1.43
SDCBP-207ENST00000520168 RDH13Q8NBN7 331 aa6.09□□□□□ -1.43
SDCBP-207ENST00000520168 LPIN2Q92539 896 aa6.09□□□□□ -1.43
SDCBP-207ENST00000520168 TIFAQ96CG3 184 aa6.09□□□□□ -1.43
SDCBP-207ENST00000520168 THAP11Q96EK4 314 aa6.09□□□□□ -1.43
SDCBP-207ENST00000520168 EDC3Q96F86 508 aaKnown RBP6.09□□□□□ -1.43
SDCBP-207ENST00000520168 PUS3Q9BZE2 481 aaKnown RBP6.09□□□□□ -1.43
SDCBP-207ENST00000520168 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.09□□□□□ -1.43
SDCBP-207ENST00000520168 PDLIM7Q9NR12 457 aa6.09□□□□□ -1.43
SDCBP-207ENST00000520168 GINM1Q9NU53 330 aa6.09□□□□□ -1.43
SDCBP-207ENST00000520168 HERC5Q9UII4 1024 aaKnown RBP6.09□□□□□ -1.43
SDCBP-207ENST00000520168 DENND2AQ9ULE3 1009 aa6.09□□□□□ -1.43
SDCBP-207ENST00000520168 FCF1Q9Y324 198 aaKnown RBP6.09□□□□□ -1.43
SDCBP-207ENST00000520168 USP34Q70CQ2 3546 aa6.09□□□□□ -1.43
SDCBP-207ENST00000520168 ZNFX1Q9P2E3 1918 aaKnown RBP6.09□□□□□ -1.44
SDCBP-207ENST00000520168 MYO9BQ13459 2157 aa6.08□□□□□ -1.44
SDCBP-207ENST00000520168 LRRC37A2A6NM11 1700 aa6.08□□□□□ -1.44
SDCBP-207ENST00000520168 IL16Q14005 1332 aa6.08□□□□□ -1.44
SDCBP-207ENST00000520168 PDS5AQ29RF7 1337 aaKnown RBP6.08□□□□□ -1.44
SDCBP-207ENST00000520168 DDTLA6NHG4 134 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-207ENST00000520168 SLC15A5A6NIM6 579 aa6.08□□□□□ -1.44
SDCBP-207ENST00000520168 AXIN1O15169 862 aa6.08□□□□□ -1.44
SDCBP-207ENST00000520168 ASNSP08243 561 aa6.08□□□□□ -1.44
SDCBP-207ENST00000520168 CNGA1P29973 690 aa6.08□□□□□ -1.44
SDCBP-207ENST00000520168 CAP2P40123 477 aa6.08□□□□□ -1.44
SDCBP-207ENST00000520168 SMCPP49901 116 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-207ENST00000520168 FPGSQ05932 587 aa6.08□□□□□ -1.44
SDCBP-207ENST00000520168 CCDC27Q2M243 656 aa6.08□□□□□ -1.44
SDCBP-207ENST00000520168 RABL6Q3YEC7 729 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-207ENST00000520168 SPTY2D1Q68D10 685 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-207ENST00000520168 DZIP1Q86YF9 867 aaKnown RBP6.08□□□□□ -1.44
SDCBP-207ENST00000520168 ZFPM1Q8IX07 1006 aa6.08□□□□□ -1.44
SDCBP-207ENST00000520168 WDR18Q9BV38 432 aa6.08□□□□□ -1.44
SDCBP-207ENST00000520168 SRCIN1Q9C0H9 1055 aa6.08□□□□□ -1.44
SDCBP-207ENST00000520168 CXXC1Q9P0U4 656 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-207ENST00000520168 SALL2Q9Y467 1007 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-207ENST00000520168 IVNS1ABPQ9Y6Y0 642 aa6.08□□□□□ -1.44
SDCBP-207ENST00000520168 A0A0G2JMZ2 1700 aa6.08□□□□□ -1.44
SDCBP-207ENST00000520168 USP17L10C9JJH3 530 aa6.07□□□□□ -1.44
SDCBP-207ENST00000520168 SEPT4O43236 478 aa6.07□□□□□ -1.44
SDCBP-207ENST00000520168 CLTBP09497 229 aa6.07□□□□□ -1.44
SDCBP-207ENST00000520168 CYBAP13498 195 aa6.07□□□□□ -1.44
SDCBP-207ENST00000520168 RAG1P15918 1043 aa6.07□□□□□ -1.44
SDCBP-207ENST00000520168 ATP2B2Q01814 1243 aa6.07□□□□□ -1.44
SDCBP-207ENST00000520168 FUT2Q10981 343 aa6.07□□□□□ -1.44
SDCBP-207ENST00000520168 PICALMQ13492 652 aa6.07□□□□□ -1.44
SDCBP-207ENST00000520168 MTMR2Q13614 643 aa6.07□□□□□ -1.44
SDCBP-207ENST00000520168 RAB30Q15771 203 aa6.07□□□□□ -1.44
SDCBP-207ENST00000520168 CCL14Q16627 93 aa6.07□□□□□ -1.44
SDCBP-207ENST00000520168 TRIM60Q495X7 471 aa6.07□□□□□ -1.44
SDCBP-207ENST00000520168 LRRC24Q50LG9 513 aa6.07□□□□□ -1.44
SDCBP-207ENST00000520168 TMEM31Q5JXX7 168 aa6.07□□□□□ -1.44
SDCBP-207ENST00000520168 SH3BP5LQ7L8J4 393 aa6.07□□□□□ -1.44
SDCBP-207ENST00000520168 TSR2Q969E8 191 aaKnown RBP6.07□□□□□ -1.44
SDCBP-207ENST00000520168 SNX27Q96L92 541 aa6.07□□□□□ -1.44
SDCBP-207ENST00000520168 P2RX7Q99572 595 aaKnown RBP6.07□□□□□ -1.44
SDCBP-207ENST00000520168 TXNRD2Q9NNW7 524 aa6.07□□□□□ -1.44
SDCBP-207ENST00000520168 RABGAP1Q9Y3P9 1069 aa6.07□□□□□ -1.44
SDCBP-207ENST00000520168 MYH1P12882 1939 aa6.07□□□□□ -1.44
SDCBP-207ENST00000520168 SMCHD1A6NHR9 2005 aa6.06□□□□□ -1.44
SDCBP-207ENST00000520168 MROH7-TTC4A0A0A0MT08 1334 aa6.06□□□□□ -1.44
SDCBP-207ENST00000520168 MROH7Q68CQ1 1323 aa6.06□□□□□ -1.44
SDCBP-207ENST00000520168 MYH8P13535 1937 aa6.06□□□□□ -1.44
SDCBP-207ENST00000520168 TRIM43BA6NCK2 446 aa6.06□□□□□ -1.44
SDCBP-207ENST00000520168 DDX11L8A8MPP1 907 aa6.06□□□□□ -1.44
SDCBP-207ENST00000520168 F6X3S4 739 aa6.06□□□□□ -1.44
SDCBP-207ENST00000520168 KIAA0355O15063 1070 aa6.06□□□□□ -1.44
SDCBP-207ENST00000520168 ZBTB24O43167 697 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-207ENST00000520168 STRNO43815 780 aa6.06□□□□□ -1.44
SDCBP-207ENST00000520168 GPR37L1O60883 481 aa6.06□□□□□ -1.44
SDCBP-207ENST00000520168 GCGRP47871 477 aa6.06□□□□□ -1.44
SDCBP-207ENST00000520168 GRB14Q14449 540 aa6.06□□□□□ -1.44
SDCBP-207ENST00000520168 GJC2Q5T442 439 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-207ENST00000520168 OLFML2BQ68BL8 750 aa6.06□□□□□ -1.44
SDCBP-207ENST00000520168 SMYD5Q6GMV2 418 aa6.06□□□□□ -1.44
SDCBP-207ENST00000520168 LBX2Q6XYB7 198 aa6.06□□□□□ -1.44
SDCBP-207ENST00000520168 FAM160A2Q8N612 972 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-207ENST00000520168 TRIM43Q96BQ3 446 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-207ENST00000520168 SUCLG2Q96I99 432 aa6.06□□□□□ -1.44
SDCBP-207ENST00000520168 TOX2Q96NM4 488 aa6.06□□□□□ -1.44
SDCBP-207ENST00000520168 LRFN3Q9BTN0 628 aa6.06□□□□□ -1.44
SDCBP-207ENST00000520168 PORCNQ9H237 461 aa6.06□□□□□ -1.44
SDCBP-207ENST00000520168 MTIF3Q9H2K0 278 aaKnown RBP6.06□□□□□ -1.44
SDCBP-207ENST00000520168 DHX36Q9H2U1 1008 aaKnown RBP6.06□□□□□ -1.44
SDCBP-207ENST00000520168 DDX4Q9NQI0 724 aaKnown RBP6.06□□□□□ -1.44
SDCBP-207ENST00000520168 SLC5A4Q9NY91 659 aa6.06□□□□□ -1.44
SDCBP-207ENST00000520168 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-207ENST00000520168 RBPJLQ9UBG7 517 aa6.06□□□□□ -1.44
SDCBP-207ENST00000520168 DACH1Q9UI36 760 aa6.06□□□□□ -1.44
SDCBP-207ENST00000520168 SLC27A5Q9Y2P5 690 aa6.06□□□□□ -1.44
SDCBP-207ENST00000520168 MUC6Q6W4X9 2439 aa6.06□□□□□ -1.44
SDCBP-207ENST00000520168 ROBO3Q96MS0 1386 aa6.06□□□□□ -1.44
SDCBP-207ENST00000520168 PARP14Q460N5 1801 aa6.05□□□□□ -1.44
SDCBP-207ENST00000520168 GPR75-ASB3A0A0A6YYF3 556 aa6.05□□□□□ -1.44
SDCBP-207ENST00000520168 DCDC2CA8MYV0 355 aa6.05□□□□□ -1.44
SDCBP-207ENST00000520168 EYA2O00167 538 aa6.05□□□□□ -1.44
SDCBP-207ENST00000520168 WFS1O76024 890 aa6.05□□□□□ -1.44
SDCBP-207ENST00000520168 BMP1P13497 986 aa6.05□□□□□ -1.44
SDCBP-207ENST00000520168 BTDP43251 543 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms