RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 RAD21O60216 631 aa30.21■■■□□ 2.43
VEGFA-220ENST00000519767 IGHA2P01877 340 aa30.21■■■□□ 2.43
VEGFA-220ENST00000519767 SLC3A2P08195 630 aaKnown RBP30.21■■■□□ 2.43
VEGFA-220ENST00000519767 STK11IPQ8N1F8 1099 aa30.21■■■□□ 2.43
VEGFA-220ENST00000519767 RANBP2P49792 3224 aaKnown RBP30.2■■■□□ 2.43
VEGFA-220ENST00000519767 MYH8P13535 1937 aa30.2■■■□□ 2.43
VEGFA-220ENST00000519767 FCER1AP12319 257 aa30.2■■■□□ 2.43
VEGFA-220ENST00000519767 TMEM132BQ14DG7 1078 aa30.2■■■□□ 2.43
VEGFA-220ENST00000519767 SAMD1Q6SPF0 538 aaPredicted RBP30.2■■■□□ 2.43
VEGFA-220ENST00000519767 RBM27Q9P2N5 1060 aaKnown RBP30.2■■■□□ 2.43
VEGFA-220ENST00000519767 PPP1R9AQ9ULJ8 1098 aa30.2■■■□□ 2.43
VEGFA-220ENST00000519767 F5H6K3 240 aa30.19■■■□□ 2.42
VEGFA-220ENST00000519767 VWA5AO00534 786 aa30.19■■■□□ 2.42
VEGFA-220ENST00000519767 CYP2C19P33261 490 aa30.19■■■□□ 2.42
VEGFA-220ENST00000519767 PDE4BQ07343 736 aa30.19■■■□□ 2.42
VEGFA-220ENST00000519767 KLRC3Q07444 240 aa30.19■■■□□ 2.42
VEGFA-220ENST00000519767 FAM83BQ5T0W9 1011 aa30.19■■■□□ 2.42
VEGFA-220ENST00000519767 MKL1Q969V6 931 aa30.19■■■□□ 2.42
VEGFA-220ENST00000519767 SEC62Q99442 399 aaKnown RBP30.19■■■□□ 2.42
VEGFA-220ENST00000519767 PRO3102Q9H379 93 aa30.19■■■□□ 2.42
VEGFA-220ENST00000519767 STAP2Q9UGK3 403 aa30.19■■■□□ 2.42
VEGFA-220ENST00000519767 SYNPO2Q9UMS6 1093 aa30.19■■■□□ 2.42
VEGFA-220ENST00000519767 SALL3Q9BXA9 1300 aa30.19■■■□□ 2.42
VEGFA-220ENST00000519767 CNGA1P29973 690 aa30.18■■■□□ 2.42
VEGFA-220ENST00000519767 COPB2P35606 906 aa30.18■■■□□ 2.42
VEGFA-220ENST00000519767 STAT3P40763 770 aa30.18■■■□□ 2.42
VEGFA-220ENST00000519767 TICAM2Q86XR7 235 aa30.18■■■□□ 2.42
VEGFA-220ENST00000519767 RIOX2Q8IUF8 465 aa30.18■■■□□ 2.42
VEGFA-220ENST00000519767 EVI5LQ96CN4 794 aa30.18■■■□□ 2.42
VEGFA-220ENST00000519767 NAPBQ9H115 298 aa30.18■■■□□ 2.42
VEGFA-220ENST00000519767 FBXO28Q9NVF7 368 aa30.18■■■□□ 2.42
VEGFA-220ENST00000519767 CLIP2Q9UDT6 1046 aa30.18■■■□□ 2.42
VEGFA-220ENST00000519767 DDX20Q9UHI6 824 aaKnown RBP30.18■■■□□ 2.42
VEGFA-220ENST00000519767 IGKV6D-41A0A0C4DH26 115 aa30.17■■■□□ 2.42
VEGFA-220ENST00000519767 COBLO75128 1261 aa30.17■■■□□ 2.42
VEGFA-220ENST00000519767 COL6A1P12109 1028 aa30.17■■■□□ 2.42
VEGFA-220ENST00000519767 RLFQ13129 1914 aa30.17■■■□□ 2.42
VEGFA-220ENST00000519767 SLF1Q9BQI6 1058 aa30.16■■■□□ 2.42
VEGFA-220ENST00000519767 MTMR4Q9NYA4 1195 aa30.16■■■□□ 2.42
VEGFA-220ENST00000519767 A0A1W2PPC1 479 aa30.15■■■□□ 2.42
VEGFA-220ENST00000519767 PRDM1O75626 825 aa30.15■■■□□ 2.42
VEGFA-220ENST00000519767 C7orf61Q8IZ16 206 aa30.15■■■□□ 2.42
VEGFA-220ENST00000519767 PRPF38AQ8NAV1 312 aaKnown RBP30.15■■■□□ 2.42
VEGFA-220ENST00000519767 TTLL1O95922 423 aa30.14■■■□□ 2.42
VEGFA-220ENST00000519767 CYBAP13498 195 aa30.14■■■□□ 2.42
VEGFA-220ENST00000519767 PDE1AP54750 535 aa30.14■■■□□ 2.42
VEGFA-220ENST00000519767 NEDD1Q8NHV4 660 aa30.14■■■□□ 2.42
VEGFA-220ENST00000519767 NDUFB10O96000 172 aa30.13■■■□□ 2.41
VEGFA-220ENST00000519767 TSPY3P0CV98 308 aa30.13■■■□□ 2.41
VEGFA-220ENST00000519767 TSPY8P0CW00 308 aa30.13■■■□□ 2.41
VEGFA-220ENST00000519767 PPARAQ07869 468 aa30.13■■■□□ 2.41
VEGFA-220ENST00000519767 KCTD2Q14681 263 aa30.13■■■□□ 2.41
VEGFA-220ENST00000519767 TRPV1Q8NER1 839 aa30.13■■■□□ 2.41
VEGFA-220ENST00000519767 YTHDC1Q96MU7 727 aaKnown RBP30.13■■■□□ 2.41
VEGFA-220ENST00000519767 MMP19Q99542 508 aa30.13■■■□□ 2.41
VEGFA-220ENST00000519767 ZNF214Q9UL59 606 aaPredicted RBP30.13■■■□□ 2.41
VEGFA-220ENST00000519767 PFASO15067 1338 aa30.13■■■□□ 2.41
VEGFA-220ENST00000519767 PPP4R3BQ5MIZ7 849 aa30.12■■■□□ 2.41
VEGFA-220ENST00000519767 ARRDC4Q8NCT1 418 aa30.12■■■□□ 2.41
VEGFA-220ENST00000519767 REPS2Q8NFH8 660 aa30.12■■■□□ 2.41
VEGFA-220ENST00000519767 CEP95Q96GE4 821 aa30.12■■■□□ 2.41
VEGFA-220ENST00000519767 MAML3Q96JK9 1138 aa30.12■■■□□ 2.41
VEGFA-220ENST00000519767 RWDD1Q9H446 243 aaPredicted RBP30.12■■■□□ 2.41
VEGFA-220ENST00000519767 DIS3Q9Y2L1 958 aaKnown RBP30.12■■■□□ 2.41
VEGFA-220ENST00000519767 A0A0G2JMZ2 1700 aa30.11■■■□□ 2.41
VEGFA-220ENST00000519767 GMCL1P1Q8NEA9 526 aa30.11■■■□□ 2.41
VEGFA-220ENST00000519767 NUP88Q99567 741 aaPredicted RBP30.11■■■□□ 2.41
VEGFA-220ENST00000519767 TEX13BQ9BXU2 312 aa30.11■■■□□ 2.41
VEGFA-220ENST00000519767 HELLSQ9NRZ9 838 aa30.11■■■□□ 2.41
VEGFA-220ENST00000519767 NRBP1Q9UHY1 535 aa30.11■■■□□ 2.41
VEGFA-220ENST00000519767 SEPT4O43236 478 aa30.1■■■□□ 2.41
VEGFA-220ENST00000519767 ZBED4O75132 1171 aa30.1■■■□□ 2.41
VEGFA-220ENST00000519767 TFAP4Q01664 338 aa30.1■■■□□ 2.41
VEGFA-220ENST00000519767 FEM1BQ9UK73 627 aa30.1■■■□□ 2.41
VEGFA-220ENST00000519767 ZNF236Q9UL36 1845 aa30.1■■■□□ 2.41
VEGFA-220ENST00000519767 BMP8BP34820 402 aa30.09■■■□□ 2.41
VEGFA-220ENST00000519767 CTDP1Q9Y5B0 961 aaPredicted RBP30.09■■■□□ 2.41
VEGFA-220ENST00000519767 DNM1LO00429 736 aa30.08■■■□□ 2.41
VEGFA-220ENST00000519767 ATP2A1O14983 1001 aa30.08■■■□□ 2.41
VEGFA-220ENST00000519767 GDF15Q99988 308 aa30.08■■■□□ 2.41
VEGFA-220ENST00000519767 SENP6Q9GZR1 1112 aaPredicted RBP30.08■■■□□ 2.41
VEGFA-220ENST00000519767 ZMYND8Q9ULU4 1186 aaPredicted RBP30.08■■■□□ 2.41
VEGFA-220ENST00000519767 GREB1LQ9C091 1923 aaPredicted RBP30.08■■■□□ 2.41
VEGFA-220ENST00000519767 PLIN4Q96Q06 1357 aa30.07■■■□□ 2.4
VEGFA-220ENST00000519767 ALX1Q15699 326 aa30.07■■■□□ 2.4
VEGFA-220ENST00000519767 ZNF792Q3KQV3 632 aa30.07■■■□□ 2.4
VEGFA-220ENST00000519767 FAM47AQ5JRC9 791 aa30.07■■■□□ 2.4
VEGFA-220ENST00000519767 FDX1P10109 184 aa30.06■■■□□ 2.4
VEGFA-220ENST00000519767 LRRC26Q2I0M4 334 aa30.06■■■□□ 2.4
VEGFA-220ENST00000519767 SNRNP48Q6IEG0 339 aaKnown RBP30.06■■■□□ 2.4
VEGFA-220ENST00000519767 CCDC129Q6ZRS4 1044 aa30.06■■■□□ 2.4
VEGFA-220ENST00000519767 TINF2Q9BSI4 451 aa30.06■■■□□ 2.4
VEGFA-220ENST00000519767 ANAPC4Q9UJX5 808 aa30.06■■■□□ 2.4
VEGFA-220ENST00000519767 PGK2P07205 417 aa30.05■■■□□ 2.4
VEGFA-220ENST00000519767 BMP3P12645 472 aa30.05■■■□□ 2.4
VEGFA-220ENST00000519767 PRAMEF19Q5SWL8 479 aa30.05■■■□□ 2.4
VEGFA-220ENST00000519767 SLFN13Q68D06 897 aa30.05■■■□□ 2.4
VEGFA-220ENST00000519767 SMC5Q8IY18 1101 aa30.05■■■□□ 2.4
VEGFA-220ENST00000519767 FOXP2O15409 715 aa30.04■■■□□ 2.4
VEGFA-220ENST00000519767 MCMDC2Q4G0Z9 681 aa30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms