RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 NAV1Q8NEY1 1877 aa21.68■■□□□ 1.06
TFF3-204ENST00000518498 PRKAB2O43741 272 aa21.67■■□□□ 1.06
TFF3-204ENST00000518498 AMOTL1Q8IY63 956 aa21.67■■□□□ 1.06
TFF3-204ENST00000518498 SPICE1Q8N0Z3 855 aa21.67■■□□□ 1.06
TFF3-204ENST00000518498 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.67■■□□□ 1.06
TFF3-204ENST00000518498 BOLA2Q9H3K6 86 aa21.67■■□□□ 1.06
TFF3-204ENST00000518498 FRMPD3Q5JV73 1810 aa21.66■■□□□ 1.06
TFF3-204ENST00000518498 KBTBD13C9JR72 458 aa21.66■■□□□ 1.06
TFF3-204ENST00000518498 SEPT4O43236 478 aa21.66■■□□□ 1.06
TFF3-204ENST00000518498 AKR1B1P15121 316 aa21.66■■□□□ 1.06
TFF3-204ENST00000518498 ADD2P35612 726 aa21.66■■□□□ 1.06
TFF3-204ENST00000518498 RTP1P59025 263 aa21.66■■□□□ 1.06
TFF3-204ENST00000518498 ICA1Q05084 483 aa21.66■■□□□ 1.06
TFF3-204ENST00000518498 SLC39A5Q6ZMH5 540 aa21.66■■□□□ 1.06
TFF3-204ENST00000518498 ABRAQ8N0Z2 381 aa21.66■■□□□ 1.06
TFF3-204ENST00000518498 ATG4CQ96DT6 458 aa21.66■■□□□ 1.06
TFF3-204ENST00000518498 VCPKMTQ9H867 229 aa21.66■■□□□ 1.06
TFF3-204ENST00000518498 MBD4O95243 580 aa21.65■■□□□ 1.06
TFF3-204ENST00000518498 FCER1AP12319 257 aa21.65■■□□□ 1.06
TFF3-204ENST00000518498 CDK8P49336 464 aa21.65■■□□□ 1.06
TFF3-204ENST00000518498 SLFNL1Q499Z3 407 aa21.65■■□□□ 1.06
TFF3-204ENST00000518498 PRAMEF19Q5SWL8 479 aa21.65■■□□□ 1.06
TFF3-204ENST00000518498 C12orf60Q5U649 245 aa21.65■■□□□ 1.06
TFF3-204ENST00000518498 ANO1Q5XXA6 986 aa21.65■■□□□ 1.06
TFF3-204ENST00000518498 TSHZ3Q63HK5 1081 aa21.65■■□□□ 1.06
TFF3-204ENST00000518498 SAMD1Q6SPF0 538 aaPredicted RBP21.65■■□□□ 1.06
TFF3-204ENST00000518498 DDRGK1Q96HY6 314 aa21.65■■□□□ 1.06
TFF3-204ENST00000518498 ATP11BQ9Y2G3 1177 aa21.65■■□□□ 1.06
TFF3-204ENST00000518498 USP17L12C9JPN9 530 aa21.64■■□□□ 1.05
TFF3-204ENST00000518498 USP17L21D6R901 530 aa21.64■■□□□ 1.05
TFF3-204ENST00000518498 WDR46O15213 610 aaKnown RBP21.64■■□□□ 1.05
TFF3-204ENST00000518498 SLC25A27O95847 323 aa21.64■■□□□ 1.05
TFF3-204ENST00000518498 MYCNP04198 464 aaPredicted RBP21.64■■□□□ 1.05
TFF3-204ENST00000518498 CLEC10AQ8IUN9 316 aa21.64■■□□□ 1.05
TFF3-204ENST00000518498 HAUS7Q99871 368 aa21.64■■□□□ 1.05
TFF3-204ENST00000518498 CYP2D7A0A087X1C5 515 aa21.63■■□□□ 1.05
TFF3-204ENST00000518498 POTEB2H3BUK9 544 aa21.63■■□□□ 1.05
TFF3-204ENST00000518498 GSPT1P15170 499 aaKnown RBP21.63■■□□□ 1.05
TFF3-204ENST00000518498 FAM109BQ6ICB4 259 aaPredicted RBP21.63■■□□□ 1.05
TFF3-204ENST00000518498 MAML3Q96JK9 1138 aa21.63■■□□□ 1.05
TFF3-204ENST00000518498 ZNF236Q9UL36 1845 aa21.62■■□□□ 1.05
TFF3-204ENST00000518498 TRIM6-TRIM34B2RNG4 842 aa21.62■■□□□ 1.05
TFF3-204ENST00000518498 EEF2P13639 858 aaKnown RBP21.62■■□□□ 1.05
TFF3-204ENST00000518498 TMEM132BQ14DG7 1078 aa21.62■■□□□ 1.05
TFF3-204ENST00000518498 UBE3CQ15386 1083 aa21.62■■□□□ 1.05
TFF3-204ENST00000518498 C16orf86Q6ZW13 317 aa21.62■■□□□ 1.05
TFF3-204ENST00000518498 TICAM2Q86XR7 235 aa21.62■■□□□ 1.05
TFF3-204ENST00000518498 EVI5LQ96CN4 794 aa21.62■■□□□ 1.05
TFF3-204ENST00000518498 KANSL2Q9H9L4 492 aa21.62■■□□□ 1.05
TFF3-204ENST00000518498 ADAMTS5Q9UNA0 930 aa21.62■■□□□ 1.05
TFF3-204ENST00000518498 LAMA3Q16787 3333 aa21.62■■□□□ 1.05
TFF3-204ENST00000518498 RLFQ13129 1914 aa21.62■■□□□ 1.05
TFF3-204ENST00000518498 MYH7P12883 1935 aa21.61■■□□□ 1.05
TFF3-204ENST00000518498 SMIM22K7EJ46 135 aa21.61■■□□□ 1.05
TFF3-204ENST00000518498 ADCYAP1R1P41586 468 aa21.61■■□□□ 1.05
TFF3-204ENST00000518498 ZSCAN25Q6NSZ9 544 aa21.61■■□□□ 1.05
TFF3-204ENST00000518498 SLC4A4Q9Y6R1 1079 aa21.61■■□□□ 1.05
TFF3-204ENST00000518498 SDSP20132 328 aa21.6■■□□□ 1.05
TFF3-204ENST00000518498 LRRC41Q15345 812 aa21.6■■□□□ 1.05
TFF3-204ENST00000518498 RILPL2Q969X0 211 aa21.6■■□□□ 1.05
TFF3-204ENST00000518498 MMP19Q99542 508 aa21.6■■□□□ 1.05
TFF3-204ENST00000518498 PRDM5Q9NQX1 630 aaPredicted RBP21.6■■□□□ 1.05
TFF3-204ENST00000518498 A0A0G2JMZ2 1700 aa21.6■■□□□ 1.05
TFF3-204ENST00000518498 EIF5BO60841 1220 aaKnown RBP21.59■■□□□ 1.05
TFF3-204ENST00000518498 CHGBP05060 677 aa21.59■■□□□ 1.05
TFF3-204ENST00000518498 STAT3P40763 770 aa21.59■■□□□ 1.05
TFF3-204ENST00000518498 SNX17Q15036 470 aa21.59■■□□□ 1.05
TFF3-204ENST00000518498 LRRFIP1Q32MZ4 808 aaKnown RBP21.59■■□□□ 1.05
TFF3-204ENST00000518498 TRIM60Q495X7 471 aa21.59■■□□□ 1.05
TFF3-204ENST00000518498 CTR9Q6PD62 1173 aa21.59■■□□□ 1.05
TFF3-204ENST00000518498 CASC1Q6TDU7 716 aa21.59■■□□□ 1.05
TFF3-204ENST00000518498 RIOX2Q8IUF8 465 aa21.59■■□□□ 1.05
TFF3-204ENST00000518498 FERMT2Q96AC1 680 aa21.59■■□□□ 1.05
TFF3-204ENST00000518498 GOPCQ9HD26 462 aa21.59■■□□□ 1.05
TFF3-204ENST00000518498 NRBP1Q9UHY1 535 aa21.59■■□□□ 1.05
TFF3-204ENST00000518498 COL6A3P12111 3177 aa21.59■■□□□ 1.05
TFF3-204ENST00000518498 RAD21O60216 631 aa21.58■■□□□ 1.05
TFF3-204ENST00000518498 KCTD2Q14681 263 aa21.58■■□□□ 1.05
TFF3-204ENST00000518498 SHHQ15465 462 aa21.58■■□□□ 1.05
TFF3-204ENST00000518498 FBXO28Q9NVF7 368 aa21.58■■□□□ 1.05
TFF3-204ENST00000518498 DIS3Q9Y2L1 958 aaKnown RBP21.58■■□□□ 1.05
TFF3-204ENST00000518498 HIP1O00291 1037 aa21.57■■□□□ 1.04
TFF3-204ENST00000518498 VWA5AO00534 786 aa21.57■■□□□ 1.04
TFF3-204ENST00000518498 CDC45O75419 566 aa21.57■■□□□ 1.04
TFF3-204ENST00000518498 PGK2P07205 417 aa21.57■■□□□ 1.04
TFF3-204ENST00000518498 RARBP10826 455 aa21.57■■□□□ 1.04
TFF3-204ENST00000518498 FAM47AQ5JRC9 791 aa21.57■■□□□ 1.04
TFF3-204ENST00000518498 C1orf53Q5VUE5 145 aa21.57■■□□□ 1.04
TFF3-204ENST00000518498 BADQ92934 168 aa21.57■■□□□ 1.04
TFF3-204ENST00000518498 FAM161BQ96MY7 647 aa21.57■■□□□ 1.04
TFF3-204ENST00000518498 TINF2Q9BSI4 451 aa21.57■■□□□ 1.04
TFF3-204ENST00000518498 PUS7LQ9H0K6 701 aaKnown RBP21.57■■□□□ 1.04
TFF3-204ENST00000518498 XPNPEP3Q9NQH7 507 aa21.57■■□□□ 1.04
TFF3-204ENST00000518498 PPP1R9AQ9ULJ8 1098 aa21.57■■□□□ 1.04
TFF3-204ENST00000518498 MYH8P13535 1937 aa21.57■■□□□ 1.04
TFF3-204ENST00000518498 COPB2P35606 906 aa21.56■■□□□ 1.04
TFF3-204ENST00000518498 ZNF792Q3KQV3 632 aa21.56■■□□□ 1.04
TFF3-204ENST00000518498 FAM83BQ5T0W9 1011 aa21.56■■□□□ 1.04
TFF3-204ENST00000518498 ZNF697Q5TEC3 545 aa21.56■■□□□ 1.04
TFF3-204ENST00000518498 RNF180Q86T96 592 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms