RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 TLL2Q9Y6L7 1015 aa13.37□□□□□ -0.27
ARFGEF1-202ENST00000517955 ZHX2Q9Y6X8 837 aa13.37□□□□□ -0.27
ARFGEF1-202ENST00000517955 KLF18A0A0U1RQI7 1052 aa13.36□□□□□ -0.27
ARFGEF1-202ENST00000517955 TMEM88BA6NKF7 163 aa13.36□□□□□ -0.27
ARFGEF1-202ENST00000517955 F5H6K3 240 aa13.36□□□□□ -0.27
ARFGEF1-202ENST00000517955 ZBTB43O43298 467 aa13.36□□□□□ -0.27
ARFGEF1-202ENST00000517955 KLRC3Q07444 240 aa13.36□□□□□ -0.27
ARFGEF1-202ENST00000517955 ME3Q16798 604 aa13.36□□□□□ -0.27
ARFGEF1-202ENST00000517955 NFXL1Q6ZNB6 911 aa13.36□□□□□ -0.27
ARFGEF1-202ENST00000517955 CLEC10AQ8IUN9 316 aa13.36□□□□□ -0.27
ARFGEF1-202ENST00000517955 ACER1Q8TDN7 264 aa13.36□□□□□ -0.27
ARFGEF1-202ENST00000517955 DCAF4Q8WV16 495 aa13.36□□□□□ -0.27
ARFGEF1-202ENST00000517955 CLMNQ96JQ2 1002 aa13.36□□□□□ -0.27
ARFGEF1-202ENST00000517955 GOPCQ9HD26 462 aa13.36□□□□□ -0.27
ARFGEF1-202ENST00000517955 PTPRFP10586 1907 aa13.35□□□□□ -0.27
ARFGEF1-202ENST00000517955 CCDC196A0A1B0GTZ2 297 aa13.35□□□□□ -0.27
ARFGEF1-202ENST00000517955 PALM3A6NDB9 673 aaPredicted RBP13.35□□□□□ -0.27
ARFGEF1-202ENST00000517955 K7ELQ4 463 aaPredicted RBP13.35□□□□□ -0.27
ARFGEF1-202ENST00000517955 PLA2G6O60733 806 aa13.35□□□□□ -0.27
ARFGEF1-202ENST00000517955 ZBTB48P10074 688 aaPredicted RBP13.35□□□□□ -0.27
ARFGEF1-202ENST00000517955 PDHBP11177 359 aa13.35□□□□□ -0.27
ARFGEF1-202ENST00000517955 SMARCA1P28370 1054 aa13.35□□□□□ -0.27
ARFGEF1-202ENST00000517955 ECE1P42892 770 aa13.35□□□□□ -0.27
ARFGEF1-202ENST00000517955 IRX5P78411 483 aaPredicted RBP13.35□□□□□ -0.27
ARFGEF1-202ENST00000517955 SPP2Q13103 211 aa13.35□□□□□ -0.27
ARFGEF1-202ENST00000517955 CUL4AQ13619 759 aa13.35□□□□□ -0.27
ARFGEF1-202ENST00000517955 GRM4Q14833 912 aa13.35□□□□□ -0.27
ARFGEF1-202ENST00000517955 USP17L2Q6R6M4 530 aa13.35□□□□□ -0.27
ARFGEF1-202ENST00000517955 FANCBQ8NB91 859 aa13.35□□□□□ -0.27
ARFGEF1-202ENST00000517955 TMX3Q96JJ7 454 aa13.35□□□□□ -0.27
ARFGEF1-202ENST00000517955 LZTS2Q9BRK4 669 aa13.35□□□□□ -0.27
ARFGEF1-202ENST00000517955 ELP3Q9H9T3 547 aa13.35□□□□□ -0.27
ARFGEF1-202ENST00000517955 RBM28Q9NW13 759 aaKnown RBP13.35□□□□□ -0.27
ARFGEF1-202ENST00000517955 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.35□□□□□ -0.27
ARFGEF1-202ENST00000517955 A0A0G2JLL6 359 aaPredicted RBP13.34□□□□□ -0.27
ARFGEF1-202ENST00000517955 DHX16O60231 1041 aaKnown RBP13.34□□□□□ -0.27
ARFGEF1-202ENST00000517955 NDUFB10O96000 172 aa13.34□□□□□ -0.27
ARFGEF1-202ENST00000517955 KIF5BP33176 963 aa13.34□□□□□ -0.27
ARFGEF1-202ENST00000517955 ANP32AP39687 249 aaKnown RBP13.34□□□□□ -0.27
ARFGEF1-202ENST00000517955 GNAQP50148 359 aa13.34□□□□□ -0.27
ARFGEF1-202ENST00000517955 HUNKP57058 714 aa13.34□□□□□ -0.27
ARFGEF1-202ENST00000517955 ATP2B2Q01814 1243 aa13.34□□□□□ -0.27
ARFGEF1-202ENST00000517955 ASPRV1Q53RT3 343 aa13.34□□□□□ -0.27
ARFGEF1-202ENST00000517955 GPATCH4Q5T3I0 446 aaKnown RBP13.34□□□□□ -0.27
ARFGEF1-202ENST00000517955 SLFN13Q68D06 897 aa13.34□□□□□ -0.27
ARFGEF1-202ENST00000517955 PRRT2Q7Z6L0 340 aaPredicted RBP13.34□□□□□ -0.27
ARFGEF1-202ENST00000517955 HSCBQ8IWL3 235 aa13.34□□□□□ -0.27
ARFGEF1-202ENST00000517955 LRRC47Q8N1G4 583 aaKnown RBP13.34□□□□□ -0.27
ARFGEF1-202ENST00000517955 GTF3C6Q969F1 213 aa13.34□□□□□ -0.27
ARFGEF1-202ENST00000517955 OPTNQ96CV9 577 aa13.34□□□□□ -0.27
ARFGEF1-202ENST00000517955 WNK4Q96J92 1243 aa13.34□□□□□ -0.27
ARFGEF1-202ENST00000517955 SLKQ9H2G2 1235 aaPredicted RBP13.34□□□□□ -0.27
ARFGEF1-202ENST00000517955 FAM217BQ9NTX9 383 aaPredicted RBP13.34□□□□□ -0.27
ARFGEF1-202ENST00000517955 GOLGA8BA8MQT2 603 aa13.33□□□□□ -0.28
ARFGEF1-202ENST00000517955 IRF6O14896 467 aa13.33□□□□□ -0.28
ARFGEF1-202ENST00000517955 WDR46O15213 610 aaKnown RBP13.33□□□□□ -0.28
ARFGEF1-202ENST00000517955 ECM2O94769 699 aaPredicted RBP13.33□□□□□ -0.28
ARFGEF1-202ENST00000517955 GJA5P36382 358 aa13.33□□□□□ -0.28
ARFGEF1-202ENST00000517955 METAP2P50579 478 aaKnown RBP eCLIP13.33□□□□□ -0.28
ARFGEF1-202ENST00000517955 APLP1P51693 650 aa13.33□□□□□ -0.28
ARFGEF1-202ENST00000517955 ZNF543Q08ER8 600 aa13.33□□□□□ -0.28
ARFGEF1-202ENST00000517955 BECN1Q14457 450 aa13.33□□□□□ -0.28
ARFGEF1-202ENST00000517955 SPRYD7Q5W111 196 aa13.33□□□□□ -0.28
ARFGEF1-202ENST00000517955 RGMBQ6NW40 437 aa13.33□□□□□ -0.28
ARFGEF1-202ENST00000517955 BTNL9Q6UXG8 535 aa13.33□□□□□ -0.28
ARFGEF1-202ENST00000517955 CCDC84Q86UT8 332 aaPredicted RBP13.33□□□□□ -0.28
ARFGEF1-202ENST00000517955 PROCA1Q8NCQ7 364 aaPredicted RBP13.33□□□□□ -0.28
ARFGEF1-202ENST00000517955 CTCFLQ8NI51 663 aaPredicted RBP13.33□□□□□ -0.28
ARFGEF1-202ENST00000517955 OTUD5Q96G74 571 aa13.33□□□□□ -0.28
ARFGEF1-202ENST00000517955 INTS4Q96HW7 963 aaKnown RBP13.33□□□□□ -0.28
ARFGEF1-202ENST00000517955 LLPHQ9BRT6 129 aaKnown RBP13.33□□□□□ -0.28
ARFGEF1-202ENST00000517955 EMILIN3Q9NT22 766 aa13.33□□□□□ -0.28
ARFGEF1-202ENST00000517955 MAD2L2Q9UI95 211 aa13.33□□□□□ -0.28
ARFGEF1-202ENST00000517955 LARGE1O95461 756 aa13.32□□□□□ -0.28
ARFGEF1-202ENST00000517955 PARP1P09874 1014 aaKnown RBP13.32□□□□□ -0.28
ARFGEF1-202ENST00000517955 BMP3P12645 472 aa13.32□□□□□ -0.28
ARFGEF1-202ENST00000517955 SLC1A4P43007 532 aa13.32□□□□□ -0.28
ARFGEF1-202ENST00000517955 SCRN1Q12765 414 aa13.32□□□□□ -0.28
ARFGEF1-202ENST00000517955 SNAPC2Q13487 334 aa13.32□□□□□ -0.28
ARFGEF1-202ENST00000517955 MTMR2Q13614 643 aa13.32□□□□□ -0.28
ARFGEF1-202ENST00000517955 NTRK3Q16288 839 aa13.32□□□□□ -0.28
ARFGEF1-202ENST00000517955 RTN1Q16799 776 aa13.32□□□□□ -0.28
ARFGEF1-202ENST00000517955 KIAA1755Q5JYT7 1200 aa13.32□□□□□ -0.28
ARFGEF1-202ENST00000517955 FASTKD5Q7L8L6 764 aaKnown RBP13.32□□□□□ -0.28
ARFGEF1-202ENST00000517955 MICU3Q86XE3 530 aa13.32□□□□□ -0.28
ARFGEF1-202ENST00000517955 CCDC102AQ96A19 550 aa13.32□□□□□ -0.28
ARFGEF1-202ENST00000517955 FEZ1Q99689 392 aa13.32□□□□□ -0.28
ARFGEF1-202ENST00000517955 LARP6Q9BRS8 491 aaKnown RBP13.32□□□□□ -0.28
ARFGEF1-202ENST00000517955 OCEL1Q9H607 264 aa13.32□□□□□ -0.28
ARFGEF1-202ENST00000517955 LOC285556D6RIA3 1793 aa13.32□□□□□ -0.28
ARFGEF1-202ENST00000517955 TESPA1A2RU30 521 aaPredicted RBP13.31□□□□□ -0.28
ARFGEF1-202ENST00000517955 TRIM75PA6NK02 468 aa13.31□□□□□ -0.28
ARFGEF1-202ENST00000517955 RASSF10A6NK89 507 aa13.31□□□□□ -0.28
ARFGEF1-202ENST00000517955 GOLGA8AA7E2F4 631 aa13.31□□□□□ -0.28
ARFGEF1-202ENST00000517955 SLC10A3P09131 477 aa13.31□□□□□ -0.28
ARFGEF1-202ENST00000517955 IFNAR1P17181 557 aa13.31□□□□□ -0.28
ARFGEF1-202ENST00000517955 CDC27P30260 824 aa13.31□□□□□ -0.28
ARFGEF1-202ENST00000517955 HOXA7P31268 230 aaPredicted RBP13.31□□□□□ -0.28
ARFGEF1-202ENST00000517955 GTF2A2P52657 109 aa13.31□□□□□ -0.28
ARFGEF1-202ENST00000517955 FUT2Q10981 343 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms