RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 ZNF236Q9UL36 1845 aa18.35■□□□□ 0.53
CSGALNACT1-204ENST00000517494 RARBP10826 455 aa18.34■□□□□ 0.53
CSGALNACT1-204ENST00000517494 EEF2P13639 858 aaKnown RBP18.34■□□□□ 0.53
CSGALNACT1-204ENST00000517494 ADD2P35612 726 aa18.34■□□□□ 0.53
CSGALNACT1-204ENST00000517494 CDK8P49336 464 aa18.34■□□□□ 0.53
CSGALNACT1-204ENST00000517494 KCTD2Q14681 263 aa18.34■□□□□ 0.53
CSGALNACT1-204ENST00000517494 SH3RF1Q7Z6J0 888 aa18.34■□□□□ 0.53
CSGALNACT1-204ENST00000517494 COL25A1Q9BXS0 654 aaPredicted RBP18.34■□□□□ 0.53
CSGALNACT1-204ENST00000517494 FBXO28Q9NVF7 368 aa18.34■□□□□ 0.53
CSGALNACT1-204ENST00000517494 A0A0G2JMZ2 1700 aa18.33■□□□□ 0.52
CSGALNACT1-204ENST00000517494 USP17L12C9JPN9 530 aa18.33■□□□□ 0.52
CSGALNACT1-204ENST00000517494 USP17L21D6R901 530 aa18.33■□□□□ 0.52
CSGALNACT1-204ENST00000517494 SLC25A27O95847 323 aa18.33■□□□□ 0.52
CSGALNACT1-204ENST00000517494 PGK1P00558 417 aa18.33■□□□□ 0.52
CSGALNACT1-204ENST00000517494 CHGBP05060 677 aa18.33■□□□□ 0.52
CSGALNACT1-204ENST00000517494 CCDC17Q96LX7 622 aa18.33■□□□□ 0.52
CSGALNACT1-204ENST00000517494 GOPCQ9HD26 462 aa18.33■□□□□ 0.52
CSGALNACT1-204ENST00000517494 SLC4A4Q9Y6R1 1079 aa18.33■□□□□ 0.52
CSGALNACT1-204ENST00000517494 TRIM43BA6NCK2 446 aa18.32■□□□□ 0.52
CSGALNACT1-204ENST00000517494 TLE2Q04725 743 aa18.32■□□□□ 0.52
CSGALNACT1-204ENST00000517494 SNX17Q15036 470 aa18.32■□□□□ 0.52
CSGALNACT1-204ENST00000517494 C12orf60Q5U649 245 aa18.32■□□□□ 0.52
CSGALNACT1-204ENST00000517494 STK11IPQ8N1F8 1099 aa18.32■□□□□ 0.52
CSGALNACT1-204ENST00000517494 TRIM43Q96BQ3 446 aaPredicted RBP18.32■□□□□ 0.52
CSGALNACT1-204ENST00000517494 LENG1Q96BZ8 264 aaPredicted RBP18.32■□□□□ 0.52
CSGALNACT1-204ENST00000517494 CDX2Q99626 313 aaPredicted RBP18.32■□□□□ 0.52
CSGALNACT1-204ENST00000517494 PQBP1O60828 265 aaKnown RBP18.31■□□□□ 0.52
CSGALNACT1-204ENST00000517494 TAL1P17542 331 aaPredicted RBP18.31■□□□□ 0.52
CSGALNACT1-204ENST00000517494 SLC4A3P48751 1232 aa18.31■□□□□ 0.52
CSGALNACT1-204ENST00000517494 FAM83BQ5T0W9 1011 aa18.31■□□□□ 0.52
CSGALNACT1-204ENST00000517494 C16orf86Q6ZW13 317 aa18.31■□□□□ 0.52
CSGALNACT1-204ENST00000517494 RNF180Q86T96 592 aa18.31■□□□□ 0.52
CSGALNACT1-204ENST00000517494 RIOX2Q8IUF8 465 aa18.31■□□□□ 0.52
CSGALNACT1-204ENST00000517494 RPAP2Q8IXW5 612 aaPredicted RBP18.31■□□□□ 0.52
CSGALNACT1-204ENST00000517494 KANSL2Q9H9L4 492 aa18.31■□□□□ 0.52
CSGALNACT1-204ENST00000517494 COG6Q9Y2V7 657 aa18.31■□□□□ 0.52
CSGALNACT1-204ENST00000517494 LTBP2Q14767 1821 aa18.3■□□□□ 0.52
CSGALNACT1-204ENST00000517494 RAB11FIP3O75154 756 aa18.3■□□□□ 0.52
CSGALNACT1-204ENST00000517494 MS4A1P11836 297 aa18.3■□□□□ 0.52
CSGALNACT1-204ENST00000517494 ATP5JP18859 108 aa18.3■□□□□ 0.52
CSGALNACT1-204ENST00000517494 STAT3P40763 770 aa18.3■□□□□ 0.52
CSGALNACT1-204ENST00000517494 MAFAQ8NHW3 353 aaPredicted RBP18.3■□□□□ 0.52
CSGALNACT1-204ENST00000517494 RNPC3Q96LT9 517 aaKnown RBP18.3■□□□□ 0.52
CSGALNACT1-204ENST00000517494 TINF2Q9BSI4 451 aa18.3■□□□□ 0.52
CSGALNACT1-204ENST00000517494 SEMA6BQ9H3T3 888 aa18.3■□□□□ 0.52
CSGALNACT1-204ENST00000517494 NRBP1Q9UHY1 535 aa18.3■□□□□ 0.52
CSGALNACT1-204ENST00000517494 PPP1R9AQ9ULJ8 1098 aa18.3■□□□□ 0.52
CSGALNACT1-204ENST00000517494 PHF24Q9UPV7 400 aa18.3■□□□□ 0.52
CSGALNACT1-204ENST00000517494 CNPY2Q9Y2B0 182 aa18.3■□□□□ 0.52
CSGALNACT1-204ENST00000517494 VWA5AO00534 786 aa18.29■□□□□ 0.52
CSGALNACT1-204ENST00000517494 CLTBP09497 229 aa18.29■□□□□ 0.52
CSGALNACT1-204ENST00000517494 SIRT2Q8IXJ6 389 aa18.29■□□□□ 0.52
CSGALNACT1-204ENST00000517494 MYLIPQ8WY64 445 aa18.29■□□□□ 0.52
CSGALNACT1-204ENST00000517494 NUP88Q99567 741 aaPredicted RBP18.29■□□□□ 0.52
CSGALNACT1-204ENST00000517494 HAUS7Q99871 368 aa18.29■□□□□ 0.52
CSGALNACT1-204ENST00000517494 DDX19BQ9UMR2 479 aa18.29■□□□□ 0.52
CSGALNACT1-204ENST00000517494 TACC3Q9Y6A5 838 aa18.29■□□□□ 0.52
CSGALNACT1-204ENST00000517494 RLFQ13129 1914 aa18.29■□□□□ 0.52
CSGALNACT1-204ENST00000517494 A0A1W2PQ45 241 aaPredicted RBP18.28■□□□□ 0.52
CSGALNACT1-204ENST00000517494 A0A1W2PQY0 241 aa18.28■□□□□ 0.52
CSGALNACT1-204ENST00000517494 AKR1A1P14550 325 aa18.28■□□□□ 0.52
CSGALNACT1-204ENST00000517494 RAG1P15918 1043 aa18.28■□□□□ 0.52
CSGALNACT1-204ENST00000517494 UBE3CQ15386 1083 aa18.28■□□□□ 0.52
CSGALNACT1-204ENST00000517494 ZNF792Q3KQV3 632 aa18.28■□□□□ 0.52
CSGALNACT1-204ENST00000517494 CTR9Q6PD62 1173 aa18.28■□□□□ 0.52
CSGALNACT1-204ENST00000517494 ADAMTS5Q9UNA0 930 aa18.28■□□□□ 0.52
CSGALNACT1-204ENST00000517494 ZBED9Q6R2W3 1325 aa18.27■□□□□ 0.52
CSGALNACT1-204ENST00000517494 ITGB8P26012 769 aa18.27■□□□□ 0.52
CSGALNACT1-204ENST00000517494 COPB2P35606 906 aa18.27■□□□□ 0.52
CSGALNACT1-204ENST00000517494 SMAD3P84022 425 aaKnown RBP18.27■□□□□ 0.52
CSGALNACT1-204ENST00000517494 C1orf53Q5VUE5 145 aa18.27■□□□□ 0.52
CSGALNACT1-204ENST00000517494 ZSCAN25Q6NSZ9 544 aa18.27■□□□□ 0.52
CSGALNACT1-204ENST00000517494 SLF1Q9BQI6 1058 aa18.27■□□□□ 0.52
CSGALNACT1-204ENST00000517494 PUS7LQ9H0K6 701 aaKnown RBP18.27■□□□□ 0.52
CSGALNACT1-204ENST00000517494 TTYH1Q9H313 450 aaPredicted RBP18.27■□□□□ 0.52
CSGALNACT1-204ENST00000517494 TMEM39AQ9NV64 488 aa18.27■□□□□ 0.52
CSGALNACT1-204ENST00000517494 ZHX1Q9UKY1 873 aaPredicted RBP18.27■□□□□ 0.52
CSGALNACT1-204ENST00000517494 ZNF214Q9UL59 606 aaPredicted RBP18.27■□□□□ 0.52
CSGALNACT1-204ENST00000517494 CTDP1Q9Y5B0 961 aaPredicted RBP18.27■□□□□ 0.52
CSGALNACT1-204ENST00000517494 EYSQ5T1H1 3165 aa18.26■□□□□ 0.51
CSGALNACT1-204ENST00000517494 ZNF865P0CJ78 1059 aaPredicted RBP18.26■□□□□ 0.51
CSGALNACT1-204ENST00000517494 FOSL2P15408 326 aa18.26■□□□□ 0.51
CSGALNACT1-204ENST00000517494 SNRNP48Q6IEG0 339 aaKnown RBP18.26■□□□□ 0.51
CSGALNACT1-204ENST00000517494 MIER1Q8N108 512 aa18.26■□□□□ 0.51
CSGALNACT1-204ENST00000517494 DDX11Q96FC9 970 aa18.26■□□□□ 0.51
CSGALNACT1-204ENST00000517494 MKNK2Q9HBH9 465 aa18.26■□□□□ 0.51
CSGALNACT1-204ENST00000517494 STARD7Q9NQZ5 370 aa18.26■□□□□ 0.51
CSGALNACT1-204ENST00000517494 ZBTB40Q9NUA8 1239 aa18.26■□□□□ 0.51
CSGALNACT1-204ENST00000517494 ARPP21Q9UBL0 812 aaPredicted RBP18.26■□□□□ 0.51
CSGALNACT1-204ENST00000517494 DIS3Q9Y2L1 958 aaKnown RBP18.26■□□□□ 0.51
CSGALNACT1-204ENST00000517494 MYH8P13535 1937 aa18.25■□□□□ 0.51
CSGALNACT1-204ENST00000517494 BAZ2AQ9UIF9 1905 aaKnown RBP18.25■□□□□ 0.51
CSGALNACT1-204ENST00000517494 MINDY4BA8MYZ0 360 aa18.25■□□□□ 0.51
CSGALNACT1-204ENST00000517494 SMARCA5O60264 1052 aaPredicted RBP18.25■□□□□ 0.51
CSGALNACT1-204ENST00000517494 EPHB4P54760 987 aa18.25■□□□□ 0.51
CSGALNACT1-204ENST00000517494 FPGSQ05932 587 aa18.25■□□□□ 0.51
CSGALNACT1-204ENST00000517494 CPXCR1Q8N123 301 aa18.25■□□□□ 0.51
CSGALNACT1-204ENST00000517494 REPS2Q8NFH8 660 aa18.25■□□□□ 0.51
CSGALNACT1-204ENST00000517494 TEX13BQ9BXU2 312 aa18.25■□□□□ 0.51
CSGALNACT1-204ENST00000517494 DCDC2CA8MYV0 355 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms