RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 NPAS4Q8IUM7 802 aa6.98□□□□□ -1.29
SCARNA6.1-201ENST00000516989 APOBEC3FQ8IUX4 373 aaKnown RBP6.98□□□□□ -1.29
SCARNA6.1-201ENST00000516989 KBTBD3Q8NAB2 608 aa6.98□□□□□ -1.29
SCARNA6.1-201ENST00000516989 GIPC2Q8TF65 315 aa6.98□□□□□ -1.29
SCARNA6.1-201ENST00000516989 ZNF384Q8TF68 577 aa6.98□□□□□ -1.29
SCARNA6.1-201ENST00000516989 EVI5LQ96CN4 794 aa6.98□□□□□ -1.29
SCARNA6.1-201ENST00000516989 MRRFQ96E11 262 aaKnown RBP6.98□□□□□ -1.29
SCARNA6.1-201ENST00000516989 PURBQ96QR8 312 aaKnown RBP6.98□□□□□ -1.29
SCARNA6.1-201ENST00000516989 DEFB129Q9H1M3 183 aa6.98□□□□□ -1.29
SCARNA6.1-201ENST00000516989 OSBPL3Q9H4L5 887 aa6.98□□□□□ -1.29
SCARNA6.1-201ENST00000516989 ZNF358Q9NW07 568 aa6.98□□□□□ -1.29
SCARNA6.1-201ENST00000516989 SCN4AP35499 1836 aa6.98□□□□□ -1.29
SCARNA6.1-201ENST00000516989 MROH7-TTC4A0A0A0MT08 1334 aa6.98□□□□□ -1.29
SCARNA6.1-201ENST00000516989 GAKO14976 1311 aa6.98□□□□□ -1.29
SCARNA6.1-201ENST00000516989 SALL3Q9BXA9 1300 aa6.98□□□□□ -1.29
SCARNA6.1-201ENST00000516989 ZNF532Q9HCE3 1301 aa6.98□□□□□ -1.29
SCARNA6.1-201ENST00000516989 CHGBP05060 677 aa6.97□□□□□ -1.29
SCARNA6.1-201ENST00000516989 ADD2P35612 726 aa6.97□□□□□ -1.29
SCARNA6.1-201ENST00000516989 DYNLL1P63167 89 aaKnown RBP6.97□□□□□ -1.29
SCARNA6.1-201ENST00000516989 TCP10Q12799 353 aa6.97□□□□□ -1.29
SCARNA6.1-201ENST00000516989 NFIAQ12857 509 aa6.97□□□□□ -1.29
SCARNA6.1-201ENST00000516989 TRIM32Q13049 653 aa6.97□□□□□ -1.29
SCARNA6.1-201ENST00000516989 PICALMQ13492 652 aa6.97□□□□□ -1.29
SCARNA6.1-201ENST00000516989 TNFAIP1Q13829 316 aa6.97□□□□□ -1.29
SCARNA6.1-201ENST00000516989 RASA3Q14644 834 aa6.97□□□□□ -1.29
SCARNA6.1-201ENST00000516989 UBE3CQ15386 1083 aa6.97□□□□□ -1.29
SCARNA6.1-201ENST00000516989 ECM1Q16610 540 aa6.97□□□□□ -1.29
SCARNA6.1-201ENST00000516989 ADGRA1Q86SQ6 560 aa6.97□□□□□ -1.29
SCARNA6.1-201ENST00000516989 TEX11Q8IYF3 940 aa6.97□□□□□ -1.29
SCARNA6.1-201ENST00000516989 KIAA1522Q9P206 1035 aaPredicted RBP6.97□□□□□ -1.29
SCARNA6.1-201ENST00000516989 MAP4K5Q9Y4K4 846 aa6.97□□□□□ -1.29
SCARNA6.1-201ENST00000516989 PITPNM2Q9BZ72 1349 aa6.97□□□□□ -1.29
SCARNA6.1-201ENST00000516989 TMEM229AB2RXF0 380 aa6.96□□□□□ -1.3
SCARNA6.1-201ENST00000516989 CELF2O95319 508 aaKnown RBP6.96□□□□□ -1.3
SCARNA6.1-201ENST00000516989 ZFYP08048 801 aaPredicted RBP6.96□□□□□ -1.3
SCARNA6.1-201ENST00000516989 MAPK1P28482 360 aa6.96□□□□□ -1.3
SCARNA6.1-201ENST00000516989 NF2P35240 595 aa6.96□□□□□ -1.3
SCARNA6.1-201ENST00000516989 USP5P45974 858 aa6.96□□□□□ -1.3
SCARNA6.1-201ENST00000516989 SKOR1P84550 965 aa6.96□□□□□ -1.3
SCARNA6.1-201ENST00000516989 MTMR3Q13615 1198 aa6.96□□□□□ -1.3
SCARNA6.1-201ENST00000516989 PRKG1Q13976 671 aa6.96□□□□□ -1.3
SCARNA6.1-201ENST00000516989 NAA30Q147X3 362 aaPredicted RBP6.96□□□□□ -1.3
SCARNA6.1-201ENST00000516989 ARID5BQ14865 1188 aa6.96□□□□□ -1.3
SCARNA6.1-201ENST00000516989 SUPT20HL1Q3ZLR7 823 aa6.96□□□□□ -1.3
SCARNA6.1-201ENST00000516989 TTC22Q5TAA0 569 aa6.96□□□□□ -1.3
SCARNA6.1-201ENST00000516989 TMED8Q6PL24 325 aaPredicted RBP6.96□□□□□ -1.3
SCARNA6.1-201ENST00000516989 MAPKAPK5Q8IW41 473 aa6.96□□□□□ -1.3
SCARNA6.1-201ENST00000516989 ZSCAN29Q8IWY8 852 aaPredicted RBP6.96□□□□□ -1.3
SCARNA6.1-201ENST00000516989 ZFPM1Q8IX07 1006 aa6.96□□□□□ -1.3
SCARNA6.1-201ENST00000516989 SH3RF3Q8TEJ3 882 aaPredicted RBP6.96□□□□□ -1.3
SCARNA6.1-201ENST00000516989 TGFBRAP1Q8WUH2 860 aa6.96□□□□□ -1.3
SCARNA6.1-201ENST00000516989 AIDAQ96BJ3 306 aa6.96□□□□□ -1.3
SCARNA6.1-201ENST00000516989 CDCA5Q96FF9 252 aa6.96□□□□□ -1.3
SCARNA6.1-201ENST00000516989 TMEM39BQ9GZU3 492 aa6.96□□□□□ -1.3
SCARNA6.1-201ENST00000516989 PUS7LQ9H0K6 701 aaKnown RBP6.96□□□□□ -1.3
SCARNA6.1-201ENST00000516989 ARAP2Q8WZ64 1704 aa6.96□□□□□ -1.3
SCARNA6.1-201ENST00000516989 TCRBV5S4A2TA0A5A2 114 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 RNF223E7ERA6 249 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 BACH1O14867 736 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 ENTPD3O75355 529 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 MBD4O95243 580 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 STAU1O95793 577 aaKnown RBP6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 APPP05067 770 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 SDSP20132 328 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 IGFBP4P22692 258 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 WNT7BP56706 349 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 RHBDL3P58872 404 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 ERVK-9P63128 1117 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 PLA2G2CQ5R387 149 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 NBPF12Q5TAG4 269 aaPredicted RBP6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 FKBP1CQ5VVH2 108 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 MIGA2Q7L4E1 593 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 FAM83AQ86UY5 434 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 TNS4Q8IZW8 715 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 C2orf69Q8N8R5 385 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 FAM151AQ8WW52 585 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 SCG3Q8WXD2 468 aaKnown RBP6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 APPBP2Q92624 585 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 COL26A1Q96A83 441 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 SEC62Q99442 399 aaKnown RBP6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 IDI2Q9BXS1 227 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 ARMT1Q9H993 441 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 TMPRSS4Q9NRS4 437 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 IGSF5Q9NSI5 407 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 DCTN4Q9UJW0 460 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 ABT1Q9ULW3 272 aaKnown RBP6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 PPP2R3BQ9Y5P8 575 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 AKAP11Q9UKA4 1901 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 PASKQ96RG2 1323 aa6.95□□□□□ -1.3
SCARNA6.1-201ENST00000516989 PSME4Q14997 1843 aa6.94□□□□□ -1.3
SCARNA6.1-201ENST00000516989 PPP1R12BO60237 982 aaPredicted RBP6.94□□□□□ -1.3
SCARNA6.1-201ENST00000516989 WDHD1O75717 1129 aaPredicted RBP6.94□□□□□ -1.3
SCARNA6.1-201ENST00000516989 GSPT1P15170 499 aaKnown RBP6.94□□□□□ -1.3
SCARNA6.1-201ENST00000516989 GDF10P55107 478 aa6.94□□□□□ -1.3
SCARNA6.1-201ENST00000516989 ARHGAP4P98171 946 aa6.94□□□□□ -1.3
SCARNA6.1-201ENST00000516989 KCNC4Q03721 635 aa6.94□□□□□ -1.3
SCARNA6.1-201ENST00000516989 ZMYM1Q5SVZ6 1142 aa6.94□□□□□ -1.3
SCARNA6.1-201ENST00000516989 CST9Q5W186 159 aa6.94□□□□□ -1.3
SCARNA6.1-201ENST00000516989 CWC27Q6UX04 472 aaKnown RBP6.94□□□□□ -1.3
SCARNA6.1-201ENST00000516989 MOB2Q70IA6 237 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms