RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 SLF1Q9BQI6 1058 aa17.04■□□□□ 0.32
SNF8-212ENST00000514089 RABGAP1Q9Y3P9 1069 aa17.04■□□□□ 0.32
SNF8-212ENST00000514089 TRIM17Q9Y577 477 aa17.04■□□□□ 0.32
SNF8-212ENST00000514089 TAF6LQ9Y6J9 622 aa17.04■□□□□ 0.32
SNF8-212ENST00000514089 DDX60LQ5H9U9 1706 aaKnown RBP17.04■□□□□ 0.32
SNF8-212ENST00000514089 OTOFQ9HC10 1997 aa17.04■□□□□ 0.32
SNF8-212ENST00000514089 BAZ2AQ9UIF9 1905 aaKnown RBP17.04■□□□□ 0.32
SNF8-212ENST00000514089 SIPA1L1O43166 1804 aa17.03■□□□□ 0.32
SNF8-212ENST00000514089 EPB41L2O43491 1005 aaKnown RBP17.03■□□□□ 0.32
SNF8-212ENST00000514089 PRC1O43663 620 aa17.03■□□□□ 0.32
SNF8-212ENST00000514089 HMGB1P09429 215 aaKnown RBP17.03■□□□□ 0.32
SNF8-212ENST00000514089 PSMA5P28066 241 aa17.03■□□□□ 0.32
SNF8-212ENST00000514089 DSG3P32926 999 aa17.03■□□□□ 0.32
SNF8-212ENST00000514089 HSPA4P34932 840 aa17.03■□□□□ 0.32
SNF8-212ENST00000514089 SLC4A3P48751 1232 aa17.03■□□□□ 0.32
SNF8-212ENST00000514089 LACTBP83111 547 aaPredicted RBP17.03■□□□□ 0.32
SNF8-212ENST00000514089 FAM110CQ1W6H9 321 aa17.03■□□□□ 0.32
SNF8-212ENST00000514089 STOX1Q6ZVD7 989 aa17.03■□□□□ 0.32
SNF8-212ENST00000514089 KCTD1Q719H9 257 aa17.03■□□□□ 0.32
SNF8-212ENST00000514089 CTU1Q7Z7A3 348 aaKnown RBP17.03■□□□□ 0.32
SNF8-212ENST00000514089 ENAHQ8N8S7 591 aaPredicted RBP17.03■□□□□ 0.32
SNF8-212ENST00000514089 PNMA1Q8ND90 353 aa17.03■□□□□ 0.32
SNF8-212ENST00000514089 FBXO28Q9NVF7 368 aa17.03■□□□□ 0.32
SNF8-212ENST00000514089 DOCK1Q14185 1865 aa17.03■□□□□ 0.32
SNF8-212ENST00000514089 CDK5RAP2Q96SN8 1893 aa17.03■□□□□ 0.32
SNF8-212ENST00000514089 TNPO2O14787 897 aaKnown RBP17.02■□□□□ 0.32
SNF8-212ENST00000514089 BCRP11274 1271 aa17.02■□□□□ 0.32
SNF8-212ENST00000514089 STAT2P52630 851 aa17.02■□□□□ 0.32
SNF8-212ENST00000514089 SYNE3Q6ZMZ3 975 aa17.02■□□□□ 0.32
SNF8-212ENST00000514089 CATIPQ7Z7H3 387 aa17.02■□□□□ 0.32
SNF8-212ENST00000514089 FAM160B2Q86V87 743 aa17.02■□□□□ 0.32
SNF8-212ENST00000514089 TMTC2Q8N394 836 aa17.02■□□□□ 0.32
SNF8-212ENST00000514089 MB21D1Q8N884 522 aa17.02■□□□□ 0.32
SNF8-212ENST00000514089 NKX2-3Q8TAU0 364 aa17.02■□□□□ 0.32
SNF8-212ENST00000514089 COA7Q96BR5 231 aa17.02■□□□□ 0.32
SNF8-212ENST00000514089 JAKMIP1Q96N16 626 aaKnown RBP17.02■□□□□ 0.32
SNF8-212ENST00000514089 USP26Q9BXU7 913 aa17.02■□□□□ 0.32
SNF8-212ENST00000514089 GPCPD1Q9NPB8 672 aa17.02■□□□□ 0.32
SNF8-212ENST00000514089 RBPJLQ9UBG7 517 aa17.02■□□□□ 0.32
SNF8-212ENST00000514089 THSD7BQ9C0I4 1608 aa17.02■□□□□ 0.31
SNF8-212ENST00000514089 FRMPD2Q68DX3 1309 aaPredicted RBP17.01■□□□□ 0.31
SNF8-212ENST00000514089 CCDC69A6NI79 296 aa17.01■□□□□ 0.31
SNF8-212ENST00000514089 SPDYE16A6NNV3 312 aaPredicted RBP17.01■□□□□ 0.31
SNF8-212ENST00000514089 NOVP48745 357 aa17.01■□□□□ 0.31
SNF8-212ENST00000514089 ERVK-9P63128 1117 aa17.01■□□□□ 0.31
SNF8-212ENST00000514089 ERVK-24P63145 666 aa17.01■□□□□ 0.31
SNF8-212ENST00000514089 COL13A1Q5TAT6 717 aaPredicted RBP17.01■□□□□ 0.31
SNF8-212ENST00000514089 RASEFQ8IZ41 740 aa17.01■□□□□ 0.31
SNF8-212ENST00000514089 ANKS1AQ92625 1134 aa17.01■□□□□ 0.31
SNF8-212ENST00000514089 ATG4CQ96DT6 458 aa17.01■□□□□ 0.31
SNF8-212ENST00000514089 TMEM87BQ96K49 555 aa17.01■□□□□ 0.31
SNF8-212ENST00000514089 PPP1R9AQ9ULJ8 1098 aa17.01■□□□□ 0.31
SNF8-212ENST00000514089 MYPNQ86TC9 1320 aa17■□□□□ 0.31
SNF8-212ENST00000514089 DHX16O60231 1041 aaKnown RBP17■□□□□ 0.31
SNF8-212ENST00000514089 GNRH1P01148 92 aa17■□□□□ 0.31
SNF8-212ENST00000514089 PKN2Q16513 984 aaKnown RBP17■□□□□ 0.31
SNF8-212ENST00000514089 TSGA10IPQ3SY00 556 aa17■□□□□ 0.31
SNF8-212ENST00000514089 BLOC1S2Q6QNY1 142 aa17■□□□□ 0.31
SNF8-212ENST00000514089 DHX32Q7L7V1 743 aaKnown RBP17■□□□□ 0.31
SNF8-212ENST00000514089 MB21D2Q8IYB1 491 aaPredicted RBP17■□□□□ 0.31
SNF8-212ENST00000514089 NUP133Q8WUM0 1156 aa17■□□□□ 0.31
SNF8-212ENST00000514089 MORF4L1Q9UBU8 362 aa17■□□□□ 0.31
SNF8-212ENST00000514089 SNX14Q9Y5W7 946 aa17■□□□□ 0.31
SNF8-212ENST00000514089 PCNTO95613 3336 aa16.99■□□□□ 0.31
SNF8-212ENST00000514089 ADGRA2Q96PE1 1338 aa16.99■□□□□ 0.31
SNF8-212ENST00000514089 VWA5AO00534 786 aa16.99■□□□□ 0.31
SNF8-212ENST00000514089 PEX10O60683 326 aa16.99■□□□□ 0.31
SNF8-212ENST00000514089 PARP1P09874 1014 aaKnown RBP16.99■□□□□ 0.31
SNF8-212ENST00000514089 PDHBP11177 359 aa16.99■□□□□ 0.31
SNF8-212ENST00000514089 MAPK4P31152 587 aa16.99■□□□□ 0.31
SNF8-212ENST00000514089 Q3C1V9 767 aa16.99■□□□□ 0.31
SNF8-212ENST00000514089 GPATCH4Q5T3I0 446 aaKnown RBP16.99■□□□□ 0.31
SNF8-212ENST00000514089 LBX2Q6XYB7 198 aa16.99■□□□□ 0.31
SNF8-212ENST00000514089 NCAPG2Q86XI2 1143 aa16.99■□□□□ 0.31
SNF8-212ENST00000514089 CPXCR1Q8N123 301 aa16.99■□□□□ 0.31
SNF8-212ENST00000514089 MTA3Q9BTC8 594 aa16.99■□□□□ 0.31
SNF8-212ENST00000514089 ARHGAP39Q9C0H5 1083 aa16.99■□□□□ 0.31
SNF8-212ENST00000514089 TXNRD2Q9NNW7 524 aa16.99■□□□□ 0.31
SNF8-212ENST00000514089 NAP1L2Q9ULW6 460 aaPredicted RBP16.99■□□□□ 0.31
SNF8-212ENST00000514089 IVNS1ABPQ9Y6Y0 642 aa16.99■□□□□ 0.31
SNF8-212ENST00000514089 GOLGA8HP0CJ92 632 aa16.98■□□□□ 0.31
SNF8-212ENST00000514089 FDX1P10109 184 aa16.98■□□□□ 0.31
SNF8-212ENST00000514089 SLC16A2P36021 539 aa16.98■□□□□ 0.31
SNF8-212ENST00000514089 STAT3P40763 770 aa16.98■□□□□ 0.31
SNF8-212ENST00000514089 SEC23AQ15436 765 aa16.98■□□□□ 0.31
SNF8-212ENST00000514089 OTOP1Q7RTM1 612 aa16.98■□□□□ 0.31
SNF8-212ENST00000514089 TNS4Q8IZW8 715 aa16.98■□□□□ 0.31
SNF8-212ENST00000514089 RAET1EQ8TD07 263 aa16.98■□□□□ 0.31
SNF8-212ENST00000514089 IGDCC4Q8TDY8 1250 aa16.98■□□□□ 0.31
SNF8-212ENST00000514089 TRIM47Q96LD4 638 aa16.98■□□□□ 0.31
SNF8-212ENST00000514089 LRRC2Q9BYS8 371 aa16.98■□□□□ 0.31
SNF8-212ENST00000514089 SPATC1LQ9H0A9 340 aa16.98■□□□□ 0.31
SNF8-212ENST00000514089 UPF2Q9HAU5 1272 aaKnown RBP16.98■□□□□ 0.31
SNF8-212ENST00000514089 BTBD7Q9P203 1132 aa16.98■□□□□ 0.31
SNF8-212ENST00000514089 SLC12A7Q9Y666 1083 aa16.98■□□□□ 0.31
SNF8-212ENST00000514089 CASTP20810 708 aaKnown RBP16.97■□□□□ 0.31
SNF8-212ENST00000514089 ANTXR2P58335 489 aa16.97■□□□□ 0.31
SNF8-212ENST00000514089 ZNF543Q08ER8 600 aa16.97■□□□□ 0.31
SNF8-212ENST00000514089 ADCK5Q3MIX3 580 aa16.97■□□□□ 0.31
SNF8-212ENST00000514089 ASPRV1Q53RT3 343 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms