RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, human

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-216	ENST00000509784	ITGA4	P13612	1032 aa		4.54	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	ZNF445	P59923	1031 aa		4.54	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	PPP2R5D	Q14738	602 aa		4.54	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	OGFOD3	Q6PK18	319 aa		4.54	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	C16orf86	Q6ZW13	317 aa		4.54	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	ZAR1	Q86SH2	424 aa		4.54	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	ZNF513	Q8N8E2	541 aa	Predicted RBP	4.54	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	JMY	Q8N9B5	988 aa		4.54	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	4.54	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	ZSWIM2	Q8NEG5	633 aa		4.54	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	SGSM3	Q96HU1	749 aa		4.54	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	MFSD14A	Q96MC6	490 aa		4.54	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	HEXIM2	Q96MH2	286 aa	Known RBP	4.54	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	PRDM14	Q9GZV8	571 aa		4.54	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	GFOD1	Q9NXC2	390 aa		4.54	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	GTF2IRD1	Q9UHL9	959 aa		4.54	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	AKT3	Q9Y243	479 aa		4.54	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	MYO15B	Q96JP2	1530 aa		4.54	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	PRR33	A8MZF0	331 aa		4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	MEIS1	O00470	390 aa		4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	NOP56	O00567	594 aa	Known RBP	4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	TBX1	O43435	398 aa		4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	ASMTL	O95671	621 aa		4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	NCL	P19338	710 aa	Known RBP	4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	L1CAM	P32004	1257 aa		4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	PPP2R2A	P63151	447 aa		4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	RASSF7	Q02833	373 aa		4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	HSP90AA2P	Q14568	343 aa	Predicted RBP	4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	TKFC	Q3LXA3	575 aa		4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	CYP27C1	Q4G0S4	372 aa		4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	PLEKHG4	Q58EX7	1191 aa		4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	YOD1	Q5VVQ6	348 aa	Predicted RBP	4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	FOXB2	Q5VYV0	432 aa		4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	PRR23C	Q6ZRP0	262 aa		4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	ZNF765	Q7L2R6	523 aa		4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	FAM214B	Q7L5A3	538 aa		4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	TMC3	Q7Z5M5	1100 aa		4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	ZNF227	Q86WZ6	799 aa		4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	BVES	Q8NE79	360 aa		4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784		Q96M66	194 aa		4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	PUS7	Q96PZ0	661 aa	Known RBP	4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	SLC26A8	Q96RN1	970 aa		4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	CDC6	Q99741	560 aa		4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	DSCC1	Q9BVC3	393 aa		4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	SLK	Q9H2G2	1235 aa	Predicted RBP	4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	NOL6	Q9H6R4	1146 aa	Known RBP	4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	ARHGEF4	Q9NR80	690 aa		4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	TPSG1	Q9NRR2	321 aa		4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	STK17A	Q9UEE5	414 aa		4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	KCNH3	Q9ULD8	1083 aa		4.53	□□□□□ -1.68
CALCOCO2-216	ENST00000509784	TRAV20	A0A0B4J274	112 aa		4.52	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	GNAT3	A8MTJ3	354 aa		4.52	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	PPP1R12A	O14974	1030 aa	Predicted RBP	4.52	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	KCNH1	O95259	989 aa		4.52	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	GRIA2	P42262	883 aa		4.52	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	KIR3DL1	P43629	444 aa		4.52	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	GYS2	P54840	703 aa		4.52	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	C21orf62-AS1	Q17RA5	79 aa		4.52	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	LONRF2	Q1L5Z9	754 aa		4.52	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	FAM209A	Q5JX71	171 aa		4.52	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	DUSP27	Q5VZP5	1158 aa		4.52	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	RNF43	Q68DV7	783 aa		4.52	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	FIBCD1	Q8N539	461 aa		4.52	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	DTWD2	Q8NBA8	298 aa		4.52	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	RCC1L	Q96I51	464 aa	Known RBP	4.52	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	COX4I2	Q96KJ9	171 aa		4.52	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	ZDHHC15	Q96MV8	337 aa		4.52	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	IPO9	Q96P70	1041 aa	Known RBP	4.52	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	AARSD1	Q9BTE6	412 aa	Known RBP	4.52	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	ASCC2	Q9H1I8	757 aa	Predicted RBP	4.52	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	CGGBP1	Q9UFW8	167 aa	Predicted RBP	4.52	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	MINPP1	Q9UNW1	487 aa		4.52	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	DIS3	Q9Y2L1	958 aa	Known RBP	4.52	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	EMC9	Q9Y3B6	208 aa		4.52	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	FHOD1	Q9Y613	1164 aa		4.52	□□□□□ -1.69
CALCOCO2-216	ENST00000509784		A0A087WZG4	1122 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	SHISA3	A0PJX4	238 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	FAM155A	B1AL88	458 aa	Predicted RBP	4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	PRODH	O43272	600 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	SIGLEC6	O43699	453 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	VAMP4	O75379	141 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	PRAMEF1	O95521	474 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	F13B	P05160	661 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	CYP27A1	Q02318	531 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	TNK2	Q07912	1038 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	NFIA	Q12857	509 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	NMI	Q13287	307 aa	Predicted RBP	4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	TCEA2	Q15560	299 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	CLEC16A	Q2KHT3	1053 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	TMEM67	Q5HYA8	995 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	ZC3H12B	Q5HYM0	836 aa	Known RBP	4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	POMZP3	Q6PJE2	187 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	ARHGAP27	Q6ZUM4	889 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	TRIM59	Q8IWR1	403 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	MFSD4A	Q8N468	514 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	ARHGEF39	Q8N4T4	335 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	FAM181A	Q8N9Y4	354 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	SYTL5	Q8TDW5	730 aa	Predicted RBP	4.51	□□□□□ -1.69

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