RNA–Protein interactions for RNA: ENST00000509354.1

TRIO-213, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-213ENST00000509354 TLR2O60603 784 aa8.69□□□□□ -1.02
TRIO-213ENST00000509354 HLA-DOAP06340 250 aa8.69□□□□□ -1.02
TRIO-213ENST00000509354 CD46P15529 392 aa8.69□□□□□ -1.02
TRIO-213ENST00000509354 CTGFP29279 349 aa8.69□□□□□ -1.02
TRIO-213ENST00000509354 ANAPC15P60006 121 aa8.69□□□□□ -1.02
TRIO-213ENST00000509354 SPP2Q13103 211 aa8.69□□□□□ -1.02
TRIO-213ENST00000509354 METTL16Q86W50 562 aaKnown RBP8.69□□□□□ -1.02
TRIO-213ENST00000509354 KCNB2Q92953 911 aa8.69□□□□□ -1.02
TRIO-213ENST00000509354 GPATCH3Q96I76 525 aa8.69□□□□□ -1.02
TRIO-213ENST00000509354 TRIM34Q9BYJ4 488 aa8.69□□□□□ -1.02
TRIO-213ENST00000509354 CRNKL1Q9BZJ0 848 aaKnown RBP8.69□□□□□ -1.02
TRIO-213ENST00000509354 DHX36Q9H2U1 1008 aaKnown RBP8.69□□□□□ -1.02
TRIO-213ENST00000509354 EFCC1Q9HA90 598 aa8.69□□□□□ -1.02
TRIO-213ENST00000509354 ZCCHC17Q9NP64 241 aaKnown RBP8.69□□□□□ -1.02
TRIO-213ENST00000509354 ZBTB21Q9ULJ3 1066 aa8.69□□□□□ -1.02
TRIO-213ENST00000509354 A0A0G2JMZ2 1700 aa8.68□□□□□ -1.02
TRIO-213ENST00000509354 CYP2D7A0A087X1C5 515 aa8.68□□□□□ -1.02
TRIO-213ENST00000509354 USP17L5A8MUK1 530 aa8.68□□□□□ -1.02
TRIO-213ENST00000509354 IGSF3O75054 1194 aa8.68□□□□□ -1.02
TRIO-213ENST00000509354 REC8O95072 547 aa8.68□□□□□ -1.02
TRIO-213ENST00000509354 PLCD1P51178 756 aa8.68□□□□□ -1.02
TRIO-213ENST00000509354 HMGCS2P54868 508 aa8.68□□□□□ -1.02
TRIO-213ENST00000509354 MFAP1P55081 439 aaKnown RBP8.68□□□□□ -1.02
TRIO-213ENST00000509354 USP46P62068 366 aa8.68□□□□□ -1.02
TRIO-213ENST00000509354 MTMR2Q13614 643 aa8.68□□□□□ -1.02
TRIO-213ENST00000509354 CASC1Q6TDU7 716 aa8.68□□□□□ -1.02
TRIO-213ENST00000509354 C17orf99Q6UX52 265 aa8.68□□□□□ -1.02
TRIO-213ENST00000509354 SLC44A5Q8NCS7 719 aa8.68□□□□□ -1.02
TRIO-213ENST00000509354 ZNF280CQ8ND82 737 aa8.68□□□□□ -1.02
TRIO-213ENST00000509354 REPIN1Q9BWE0 567 aaKnown RBP8.68□□□□□ -1.02
TRIO-213ENST00000509354 IL25Q9H293 177 aa8.68□□□□□ -1.02
TRIO-213ENST00000509354 PTCH2Q9Y6C5 1203 aa8.68□□□□□ -1.02
TRIO-213ENST00000509354 RAD50Q92878 1312 aa8.68□□□□□ -1.02
TRIO-213ENST00000509354 DNAH12Q6ZR08 3092 aa8.68□□□□□ -1.02
TRIO-213ENST00000509354 SOWAHBA6NEL2 793 aa8.67□□□□□ -1.02
TRIO-213ENST00000509354 GH2P01242 217 aa8.67□□□□□ -1.02
TRIO-213ENST00000509354 ASNSP08243 561 aa8.67□□□□□ -1.02
TRIO-213ENST00000509354 BCRP11274 1271 aa8.67□□□□□ -1.02
TRIO-213ENST00000509354 SHMT1P34896 483 aa8.67□□□□□ -1.02
TRIO-213ENST00000509354 LACTBP83111 547 aaPredicted RBP8.67□□□□□ -1.02
TRIO-213ENST00000509354 LAMA4Q16363 1823 aa8.67□□□□□ -1.02
TRIO-213ENST00000509354 PKN2Q16513 984 aaKnown RBP8.67□□□□□ -1.02
TRIO-213ENST00000509354 CERS3Q8IU89 383 aa8.67□□□□□ -1.02
TRIO-213ENST00000509354 TRIM47Q96LD4 638 aa8.67□□□□□ -1.02
TRIO-213ENST00000509354 PARK7Q99497 189 aaKnown RBP8.67□□□□□ -1.02
TRIO-213ENST00000509354 FAM117AQ9C073 453 aa8.67□□□□□ -1.02
TRIO-213ENST00000509354 PUS7LQ9H0K6 701 aaKnown RBP8.67□□□□□ -1.02
TRIO-213ENST00000509354 DCP1AQ9NPI6 582 aaPredicted RBP8.67□□□□□ -1.02
TRIO-213ENST00000509354 MCM9Q9NXL9 1143 aa8.67□□□□□ -1.02
TRIO-213ENST00000509354 SERPINB13Q9UIV8 391 aa8.67□□□□□ -1.02
TRIO-213ENST00000509354 AGTPBP1Q9UPW5 1226 aa8.67□□□□□ -1.02
TRIO-213ENST00000509354 PTPN22Q9Y2R2 807 aa8.67□□□□□ -1.02
TRIO-213ENST00000509354 FRMPD3Q5JV73 1810 aa8.66□□□□□ -1.02
TRIO-213ENST00000509354 HIP1O00291 1037 aa8.66□□□□□ -1.02
TRIO-213ENST00000509354 PEX10O60683 326 aa8.66□□□□□ -1.02
TRIO-213ENST00000509354 POLR3DP05423 398 aaPredicted RBP8.66□□□□□ -1.02
TRIO-213ENST00000509354 DDIT3P35638 169 aa8.66□□□□□ -1.02
TRIO-213ENST00000509354 ZYXQ15942 572 aaKnown RBP8.66□□□□□ -1.02
TRIO-213ENST00000509354 TMED8Q6PL24 325 aaPredicted RBP8.66□□□□□ -1.02
TRIO-213ENST00000509354 NYAP1Q6ZVC0 841 aa8.66□□□□□ -1.02
TRIO-213ENST00000509354 FASTKD5Q7L8L6 764 aaKnown RBP8.66□□□□□ -1.02
TRIO-213ENST00000509354 CLEC10AQ8IUN9 316 aa8.66□□□□□ -1.02
TRIO-213ENST00000509354 FOXP4Q8IVH2 680 aaPredicted RBP8.66□□□□□ -1.02
TRIO-213ENST00000509354 KBTBD3Q8NAB2 608 aa8.66□□□□□ -1.02
TRIO-213ENST00000509354 DYNLL2Q96FJ2 89 aa8.66□□□□□ -1.02
TRIO-213ENST00000509354 TBC1D2Q9BYX2 928 aa8.66□□□□□ -1.02
TRIO-213ENST00000509354 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.66□□□□□ -1.02
TRIO-213ENST00000509354 LSG1Q9H089 658 aaKnown RBP8.66□□□□□ -1.02
TRIO-213ENST00000509354 EHD4Q9H223 541 aa8.66□□□□□ -1.02
TRIO-213ENST00000509354 GOPCQ9HD26 462 aa8.66□□□□□ -1.02
TRIO-213ENST00000509354 TSR3Q9UJK0 312 aaKnown RBP8.66□□□□□ -1.02
TRIO-213ENST00000509354 ZNFX1Q9P2E3 1918 aaKnown RBP8.65□□□□□ -1.02
TRIO-213ENST00000509354 M0R2C6 588 aa8.65□□□□□ -1.02
TRIO-213ENST00000509354 CFHP08603 1231 aa8.65□□□□□ -1.02
TRIO-213ENST00000509354 GUCY1A2P33402 732 aa8.65□□□□□ -1.02
TRIO-213ENST00000509354 HSPA4P34932 840 aa8.65□□□□□ -1.02
TRIO-213ENST00000509354 PSMC4P43686 418 aa8.65□□□□□ -1.02
TRIO-213ENST00000509354 GABPAQ06546 454 aa8.65□□□□□ -1.02
TRIO-213ENST00000509354 UBE3CQ15386 1083 aa8.65□□□□□ -1.02
TRIO-213ENST00000509354 SH3D19Q5HYK7 790 aa8.65□□□□□ -1.02
TRIO-213ENST00000509354 TATDN1Q6P1N9 297 aa8.65□□□□□ -1.02
TRIO-213ENST00000509354 TTC6Q86TZ1 520 aa8.65□□□□□ -1.02
TRIO-213ENST00000509354 PROCA1Q8NCQ7 364 aaPredicted RBP8.65□□□□□ -1.02
TRIO-213ENST00000509354 ACER1Q8TDN7 264 aa8.65□□□□□ -1.02
TRIO-213ENST00000509354 SMCR8Q8TEV9 937 aaPredicted RBP8.65□□□□□ -1.02
TRIO-213ENST00000509354 SH3TC2Q8TF17 1288 aa8.65□□□□□ -1.02
TRIO-213ENST00000509354 OSBP2Q969R2 916 aa8.65□□□□□ -1.02
TRIO-213ENST00000509354 PCMTD1Q96MG8 357 aaPredicted RBP8.65□□□□□ -1.02
TRIO-213ENST00000509354 WDR18Q9BV38 432 aa8.65□□□□□ -1.02
TRIO-213ENST00000509354 ASCC2Q9H1I8 757 aaPredicted RBP8.65□□□□□ -1.02
TRIO-213ENST00000509354 AS3MTQ9HBK9 375 aa8.65□□□□□ -1.02
TRIO-213ENST00000509354 EPB41L4AQ9HCS5 686 aaPredicted RBP8.65□□□□□ -1.02
TRIO-213ENST00000509354 SLC45A1Q9Y2W3 748 aa8.65□□□□□ -1.02
TRIO-213ENST00000509354 CEP290O15078 2479 aa8.65□□□□□ -1.02
TRIO-213ENST00000509354 MYCP01106 439 aaPredicted RBP8.64□□□□□ -1.03
TRIO-213ENST00000509354 RGS19P49795 217 aa8.64□□□□□ -1.03
TRIO-213ENST00000509354 BACE1P56817 501 aa8.64□□□□□ -1.03
TRIO-213ENST00000509354 KIF22Q14807 665 aa8.64□□□□□ -1.03
TRIO-213ENST00000509354 SEPT2Q15019 361 aa8.64□□□□□ -1.03
TRIO-213ENST00000509354 RAB3GAP1Q15042 981 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms