RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 KLRC3Q07444 240 aa18.47■□□□□ 0.55
CLDND1-211ENST00000506575 MORN1Q5T089 497 aa18.47■□□□□ 0.55
CLDND1-211ENST00000506575 SPATC1LQ9H0A9 340 aa18.47■□□□□ 0.55
CLDND1-211ENST00000506575 TOMM22Q9NS69 142 aa18.47■□□□□ 0.55
CLDND1-211ENST00000506575 SYNPO2Q9UMS6 1093 aa18.47■□□□□ 0.55
CLDND1-211ENST00000506575 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.47■□□□□ 0.55
CLDND1-211ENST00000506575 SLC15A5A6NIM6 579 aa18.46■□□□□ 0.55
CLDND1-211ENST00000506575 RANBP6O60518 1105 aaKnown RBP18.46■□□□□ 0.55
CLDND1-211ENST00000506575 ZKSCAN1P17029 563 aaPredicted RBP18.46■□□□□ 0.55
CLDND1-211ENST00000506575 MAP2K5Q13163 448 aa18.46■□□□□ 0.55
CLDND1-211ENST00000506575 TTC22Q5TAA0 569 aa18.46■□□□□ 0.55
CLDND1-211ENST00000506575 MKL1Q969V6 931 aa18.46■□□□□ 0.55
CLDND1-211ENST00000506575 APBA2Q99767 749 aa18.46■□□□□ 0.55
CLDND1-211ENST00000506575 MOV10L1Q9BXT6 1211 aaKnown RBP18.46■□□□□ 0.55
CLDND1-211ENST00000506575 COL11A1P12107 1806 aaPredicted RBP18.46■□□□□ 0.55
CLDND1-211ENST00000506575 ORC4O43929 436 aa18.45■□□□□ 0.54
CLDND1-211ENST00000506575 NDUFB10O96000 172 aa18.45■□□□□ 0.54
CLDND1-211ENST00000506575 PTPREP23469 700 aa18.45■□□□□ 0.54
CLDND1-211ENST00000506575 GJA8P48165 433 aa18.45■□□□□ 0.54
CLDND1-211ENST00000506575 LRRC47Q8N1G4 583 aaKnown RBP18.45■□□□□ 0.54
CLDND1-211ENST00000506575 SHCBP1Q8NEM2 672 aa18.45■□□□□ 0.54
CLDND1-211ENST00000506575 U2AF1L4Q8WU68 220 aaKnown RBP18.45■□□□□ 0.54
CLDND1-211ENST00000506575 TRIB2Q92519 343 aa18.45■□□□□ 0.54
CLDND1-211ENST00000506575 USP6NLQ92738 828 aa18.45■□□□□ 0.54
CLDND1-211ENST00000506575 NUP88Q99567 741 aaPredicted RBP18.45■□□□□ 0.54
CLDND1-211ENST00000506575 INCENPQ9NQS7 918 aa18.45■□□□□ 0.54
CLDND1-211ENST00000506575 FBXO28Q9NVF7 368 aa18.45■□□□□ 0.54
CLDND1-211ENST00000506575 PPP1R9AQ9ULJ8 1098 aa18.45■□□□□ 0.54
CLDND1-211ENST00000506575 STRNO43815 780 aa18.44■□□□□ 0.54
CLDND1-211ENST00000506575 ERCC3P19447 782 aa18.44■□□□□ 0.54
CLDND1-211ENST00000506575 RRP12Q5JTH9 1297 aaKnown RBP18.44■□□□□ 0.54
CLDND1-211ENST00000506575 NCAPG2Q86XI2 1143 aa18.44■□□□□ 0.54
CLDND1-211ENST00000506575 GMCL1P1Q8NEA9 526 aa18.44■□□□□ 0.54
CLDND1-211ENST00000506575 SLF1Q9BQI6 1058 aa18.44■□□□□ 0.54
CLDND1-211ENST00000506575 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.44■□□□□ 0.54
CLDND1-211ENST00000506575 MROH8Q9H579 483 aa18.44■□□□□ 0.54
CLDND1-211ENST00000506575 HMX1Q9NP08 348 aaPredicted RBP18.44■□□□□ 0.54
CLDND1-211ENST00000506575 ISY1Q9ULR0 285 aaKnown RBP18.44■□□□□ 0.54
CLDND1-211ENST00000506575 STX8Q9UNK0 236 aa18.44■□□□□ 0.54
CLDND1-211ENST00000506575 VWA5AO00534 786 aa18.43■□□□□ 0.54
CLDND1-211ENST00000506575 SGPL1O95470 568 aa18.43■□□□□ 0.54
CLDND1-211ENST00000506575 SLC25A27O95847 323 aa18.43■□□□□ 0.54
CLDND1-211ENST00000506575 HAND2P61296 217 aa18.43■□□□□ 0.54
CLDND1-211ENST00000506575 GRB14Q14449 540 aa18.43■□□□□ 0.54
CLDND1-211ENST00000506575 TMEM132BQ14DG7 1078 aa18.43■□□□□ 0.54
CLDND1-211ENST00000506575 SHISA4Q96DD7 197 aa18.43■□□□□ 0.54
CLDND1-211ENST00000506575 DEFB118Q96PH6 123 aa18.43■□□□□ 0.54
CLDND1-211ENST00000506575 ADAMTS5Q9UNA0 930 aa18.43■□□□□ 0.54
CLDND1-211ENST00000506575 CTDP1Q9Y5B0 961 aaPredicted RBP18.43■□□□□ 0.54
CLDND1-211ENST00000506575 RPTORQ8N122 1335 aa18.43■□□□□ 0.54
CLDND1-211ENST00000506575 MKI67P46013 3256 aaKnown RBP18.42■□□□□ 0.54
CLDND1-211ENST00000506575 TFRCP02786 760 aaKnown RBP18.42■□□□□ 0.54
CLDND1-211ENST00000506575 FGRP09769 529 aa18.42■□□□□ 0.54
CLDND1-211ENST00000506575 GSPT1P15170 499 aaKnown RBP18.42■□□□□ 0.54
CLDND1-211ENST00000506575 CAPN2P17655 700 aa18.42■□□□□ 0.54
CLDND1-211ENST00000506575 TRIM32Q13049 653 aa18.42■□□□□ 0.54
CLDND1-211ENST00000506575 CCL14Q16627 93 aa18.42■□□□□ 0.54
CLDND1-211ENST00000506575 SLFN13Q68D06 897 aa18.42■□□□□ 0.54
CLDND1-211ENST00000506575 MFSD6Q6ZSS7 791 aa18.42■□□□□ 0.54
CLDND1-211ENST00000506575 DPP9Q86TI2 863 aa18.42■□□□□ 0.54
CLDND1-211ENST00000506575 PRPF38AQ8NAV1 312 aaKnown RBP18.42■□□□□ 0.54
CLDND1-211ENST00000506575 RNF41Q9H4P4 317 aaPredicted RBP18.42■□□□□ 0.54
CLDND1-211ENST00000506575 PAK6Q9NQU5 681 aaPredicted RBP18.42■□□□□ 0.54
CLDND1-211ENST00000506575 FEM1BQ9UK73 627 aa18.42■□□□□ 0.54
CLDND1-211ENST00000506575 TACC3Q9Y6A5 838 aa18.42■□□□□ 0.54
CLDND1-211ENST00000506575 ZNF213O14771 459 aa18.41■□□□□ 0.54
CLDND1-211ENST00000506575 PCP11498 1178 aaKnown RBP18.41■□□□□ 0.54
CLDND1-211ENST00000506575 BMP3P12645 472 aa18.41■□□□□ 0.54
CLDND1-211ENST00000506575 PRKAR2AP13861 404 aaKnown RBP18.41■□□□□ 0.54
CLDND1-211ENST00000506575 STAT3P40763 770 aa18.41■□□□□ 0.54
CLDND1-211ENST00000506575 AKNAD1Q5T1N1 836 aa18.41■□□□□ 0.54
CLDND1-211ENST00000506575 KIFC2Q96AC6 838 aa18.41■□□□□ 0.54
CLDND1-211ENST00000506575 SLC5A4Q9NY91 659 aa18.41■□□□□ 0.54
CLDND1-211ENST00000506575 ZNF236Q9UL36 1845 aa18.41■□□□□ 0.54
CLDND1-211ENST00000506575 LAMA4Q16363 1823 aa18.4■□□□□ 0.54
CLDND1-211ENST00000506575 NMT2O60551 498 aa18.4■□□□□ 0.54
CLDND1-211ENST00000506575 ZBED4O75132 1171 aa18.4■□□□□ 0.54
CLDND1-211ENST00000506575 HOXC6P09630 235 aa18.4■□□□□ 0.54
CLDND1-211ENST00000506575 FCER1AP12319 257 aa18.4■□□□□ 0.54
CLDND1-211ENST00000506575 ADORA2AP29274 412 aa18.4■□□□□ 0.54
CLDND1-211ENST00000506575 COPB2P35606 906 aa18.4■□□□□ 0.54
CLDND1-211ENST00000506575 IKQ13123 557 aaPredicted RBP18.4■□□□□ 0.54
CLDND1-211ENST00000506575 MFSD14CQ5VZR4 134 aa18.4■□□□□ 0.54
CLDND1-211ENST00000506575 RIOX2Q8IUF8 465 aa18.4■□□□□ 0.54
CLDND1-211ENST00000506575 STAG1Q8WVM7 1258 aa18.4■□□□□ 0.54
CLDND1-211ENST00000506575 RUFY2Q8WXA3 655 aa18.4■□□□□ 0.54
CLDND1-211ENST00000506575 GMCL1Q96IK5 515 aa18.4■□□□□ 0.54
CLDND1-211ENST00000506575 DSCC1Q9BVC3 393 aa18.4■□□□□ 0.54
CLDND1-211ENST00000506575 IL17RBQ9NRM6 502 aa18.4■□□□□ 0.54
CLDND1-211ENST00000506575 SLC1A4P43007 532 aa18.39■□□□□ 0.53
CLDND1-211ENST00000506575 CACNB2Q08289 660 aaPredicted RBP18.39■□□□□ 0.53
CLDND1-211ENST00000506575 MAP3K21Q5TCX8 1036 aa18.39■□□□□ 0.53
CLDND1-211ENST00000506575 ABRAQ8N0Z2 381 aa18.39■□□□□ 0.53
CLDND1-211ENST00000506575 TEX13BQ9BXU2 312 aa18.39■□□□□ 0.53
CLDND1-211ENST00000506575 CTNNA3Q9UI47 895 aa18.39■□□□□ 0.53
CLDND1-211ENST00000506575 ZNF214Q9UL59 606 aaPredicted RBP18.39■□□□□ 0.53
CLDND1-211ENST00000506575 RAD50Q92878 1312 aa18.39■□□□□ 0.53
CLDND1-211ENST00000506575 ZNFX1Q9P2E3 1918 aaKnown RBP18.39■□□□□ 0.53
CLDND1-211ENST00000506575 TMEM232C9JQI7 657 aa18.38■□□□□ 0.53
CLDND1-211ENST00000506575 FARP2O94887 1054 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms