RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 PALM3A6NDB9 673 aaPredicted RBP28.31■■■□□ 2.12
DHFR-203ENST00000505337 CUTAO60888 179 aa28.31■■■□□ 2.12
DHFR-203ENST00000505337 SLC35G1Q2M3R5 365 aa28.31■■■□□ 2.12
DHFR-203ENST00000505337 EAPPQ56P03 285 aaPredicted RBP28.31■■■□□ 2.12
DHFR-203ENST00000505337 SHC4Q6S5L8 630 aa28.31■■■□□ 2.12
DHFR-203ENST00000505337 ANO6Q4KMQ2 910 aa28.3■■■□□ 2.12
DHFR-203ENST00000505337 BRMS1Q9HCU9 246 aa28.3■■■□□ 2.12
DHFR-203ENST00000505337 SWAP70Q9UH65 585 aa28.3■■■□□ 2.12
DHFR-203ENST00000505337 SERPINB13Q9UIV8 391 aa28.3■■■□□ 2.12
DHFR-203ENST00000505337 ZBTB12Q9Y330 459 aaPredicted RBP28.3■■■□□ 2.12
DHFR-203ENST00000505337 TOP1P11387 765 aaKnown RBP28.29■■■□□ 2.12
DHFR-203ENST00000505337 RESP18Q5W5W9 173 aa28.29■■■□□ 2.12
DHFR-203ENST00000505337 CHADLQ6NUI6 762 aa28.29■■■□□ 2.12
DHFR-203ENST00000505337 PNMA8AQ86V59 439 aaPredicted RBP28.29■■■□□ 2.12
DHFR-203ENST00000505337 LDHDQ86WU2 507 aa28.29■■■□□ 2.12
DHFR-203ENST00000505337 FAM43AQ8N2R8 423 aa28.29■■■□□ 2.12
DHFR-203ENST00000505337 PCDHB6Q9Y5E3 794 aa28.29■■■□□ 2.12
DHFR-203ENST00000505337 IGKV6D-41A0A0C4DH26 115 aa28.29■■■□□ 2.12
DHFR-203ENST00000505337 FAM205CA6NFA0 338 aa28.29■■■□□ 2.12
DHFR-203ENST00000505337 NFIAQ12857 509 aa28.29■■■□□ 2.12
DHFR-203ENST00000505337 EHD4Q9H223 541 aa28.29■■■□□ 2.12
DHFR-203ENST00000505337 CABP5Q9NP86 173 aa28.29■■■□□ 2.12
DHFR-203ENST00000505337 SH3GLB2Q9NR46 395 aa28.29■■■□□ 2.12
DHFR-203ENST00000505337 EARS2Q5JPH6 523 aaKnown RBP28.28■■■□□ 2.12
DHFR-203ENST00000505337 KRI1Q8N9T8 703 aaKnown RBP28.28■■■□□ 2.12
DHFR-203ENST00000505337 LZTS2Q9BRK4 669 aa28.28■■■□□ 2.12
DHFR-203ENST00000505337 USP25Q9UHP3 1055 aa28.28■■■□□ 2.12
DHFR-203ENST00000505337 SERPINA10Q9UK55 444 aa28.28■■■□□ 2.12
DHFR-203ENST00000505337 CYTH3O43739 400 aa28.27■■■□□ 2.12
DHFR-203ENST00000505337 FBXO2Q9UK22 296 aaPredicted RBP28.27■■■□□ 2.12
DHFR-203ENST00000505337 PCDHAC2Q9Y5I4 1007 aa28.27■■■□□ 2.12
DHFR-203ENST00000505337 SHTN1A0MZ66 631 aa28.26■■■□□ 2.12
DHFR-203ENST00000505337 ZNF202O95125 648 aa28.26■■■□□ 2.12
DHFR-203ENST00000505337 CAVIN2O95810 425 aa28.26■■■□□ 2.12
DHFR-203ENST00000505337 VIL1P09327 827 aaKnown RBP28.26■■■□□ 2.12
DHFR-203ENST00000505337 PTPREP23469 700 aa28.26■■■□□ 2.12
DHFR-203ENST00000505337 SHMT1P34896 483 aa28.26■■■□□ 2.12
DHFR-203ENST00000505337 TIGD1Q96MW7 591 aa28.26■■■□□ 2.12
DHFR-203ENST00000505337 SPZ1Q9BXG8 430 aa28.26■■■□□ 2.12
DHFR-203ENST00000505337 IDI2Q9BXS1 227 aa28.26■■■□□ 2.12
DHFR-203ENST00000505337 CEP131Q9UPN4 1083 aa28.26■■■□□ 2.12
DHFR-203ENST00000505337 NPM3O75607 178 aaKnown RBP28.26■■■□□ 2.11
DHFR-203ENST00000505337 HLA-DOAP06340 250 aa28.26■■■□□ 2.11
DHFR-203ENST00000505337 AKR1B1P15121 316 aa28.26■■■□□ 2.11
DHFR-203ENST00000505337 STX1AQ16623 288 aa28.26■■■□□ 2.11
DHFR-203ENST00000505337 RASGRP2Q7LDG7 609 aa28.26■■■□□ 2.11
DHFR-203ENST00000505337 CLIC6Q96NY7 704 aa28.26■■■□□ 2.11
DHFR-203ENST00000505337 CBX8Q9HC52 389 aa28.26■■■□□ 2.11
DHFR-203ENST00000505337 MTMR4Q9NYA4 1195 aa28.26■■■□□ 2.11
DHFR-203ENST00000505337 HS1BP3Q53T59 392 aa28.25■■■□□ 2.11
DHFR-203ENST00000505337 DPF2Q92785 391 aa28.25■■■□□ 2.11
DHFR-203ENST00000505337 ADARB2Q9NS39 739 aaKnown RBP28.25■■■□□ 2.11
DHFR-203ENST00000505337 CNOT7Q9UIV1 285 aaKnown RBP28.25■■■□□ 2.11
DHFR-203ENST00000505337 COL2A1P02458 1487 aaPredicted RBP28.25■■■□□ 2.11
DHFR-203ENST00000505337 USP50Q70EL3 339 aaPredicted RBP28.24■■■□□ 2.11
DHFR-203ENST00000505337 DNAJC25Q9H1X3 360 aa28.24■■■□□ 2.11
DHFR-203ENST00000505337 CLEC11AQ9Y240 323 aa28.24■■■□□ 2.11
DHFR-203ENST00000505337 TRIM75PA6NK02 468 aa28.23■■■□□ 2.11
DHFR-203ENST00000505337 PARP1P09874 1014 aaKnown RBP28.23■■■□□ 2.11
DHFR-203ENST00000505337 CALML3P27482 149 aa28.23■■■□□ 2.11
DHFR-203ENST00000505337 SYKP43405 635 aa28.23■■■□□ 2.11
DHFR-203ENST00000505337 NLRP5P59047 1200 aa28.23■■■□□ 2.11
DHFR-203ENST00000505337 FAM177A1Q8N128 213 aaPredicted RBP28.23■■■□□ 2.11
DHFR-203ENST00000505337 PIBF1Q8WXW3 757 aa28.23■■■□□ 2.11
DHFR-203ENST00000505337 SDF4Q9BRK5 362 aa28.23■■■□□ 2.11
DHFR-203ENST00000505337 FAM198AQ9UFP1 575 aa28.23■■■□□ 2.11
DHFR-203ENST00000505337 NOL7Q9UMY1 257 aaKnown RBP28.23■■■□□ 2.11
DHFR-203ENST00000505337 NOM1Q5C9Z4 860 aaKnown RBP28.23■■■□□ 2.11
DHFR-203ENST00000505337 ZNF579Q8NAF0 562 aaKnown RBP28.23■■■□□ 2.11
DHFR-203ENST00000505337 GPKOWQ92917 476 aaPredicted RBP eCLIP28.23■■■□□ 2.11
DHFR-203ENST00000505337 KLRF2D3W0D1 207 aa28.22■■■□□ 2.11
DHFR-203ENST00000505337 RPS12P25398 132 aaKnown RBP28.22■■■□□ 2.11
DHFR-203ENST00000505337 SMARCA1P28370 1054 aa28.22■■■□□ 2.11
DHFR-203ENST00000505337 APLP1P51693 650 aa28.22■■■□□ 2.11
DHFR-203ENST00000505337 LUZP1Q86V48 1076 aa28.22■■■□□ 2.11
DHFR-203ENST00000505337 ZFPM1Q8IX07 1006 aa28.22■■■□□ 2.11
DHFR-203ENST00000505337 MICALL2Q8IY33 904 aa28.22■■■□□ 2.11
DHFR-203ENST00000505337 DHX36Q9H2U1 1008 aaKnown RBP28.22■■■□□ 2.11
DHFR-203ENST00000505337 SRPRBQ9Y5M8 271 aaKnown RBP28.22■■■□□ 2.11
DHFR-203ENST00000505337 GOLGA8HP0CJ92 632 aa28.21■■■□□ 2.11
DHFR-203ENST00000505337 ZNF165P49910 485 aa28.21■■■□□ 2.11
DHFR-203ENST00000505337 WWC2Q6AWC2 1192 aa28.21■■■□□ 2.11
DHFR-203ENST00000505337 TYW1BQ6NUM6 668 aa28.21■■■□□ 2.11
DHFR-203ENST00000505337 DNAJC18Q9H819 358 aa28.21■■■□□ 2.11
DHFR-203ENST00000505337 KIAA1468Q9P260 1216 aa28.21■■■□□ 2.11
DHFR-203ENST00000505337 MTMR7Q9Y216 660 aa28.21■■■□□ 2.11
DHFR-203ENST00000505337 WNT7AO00755 349 aa28.21■■■□□ 2.11
DHFR-203ENST00000505337 BMP15O95972 392 aa28.21■■■□□ 2.11
DHFR-203ENST00000505337 HIRAP54198 1017 aaPredicted RBP28.21■■■□□ 2.11
DHFR-203ENST00000505337 GRIN1Q05586 938 aa28.21■■■□□ 2.11
DHFR-203ENST00000505337 MAP1SQ66K74 1059 aaPredicted RBP28.21■■■□□ 2.11
DHFR-203ENST00000505337 RSBN1LQ6PCB5 846 aaPredicted RBP28.21■■■□□ 2.11
DHFR-203ENST00000505337 C11orf57Q6ZUT1 292 aaPredicted RBP28.21■■■□□ 2.11
DHFR-203ENST00000505337 DAGLBQ8NCG7 672 aa28.21■■■□□ 2.11
DHFR-203ENST00000505337 M0R2N6 131 aa28.2■■■□□ 2.1
DHFR-203ENST00000505337 ADAMTS3O15072 1205 aa28.2■■■□□ 2.1
DHFR-203ENST00000505337 AP5Z1O43299 807 aa28.2■■■□□ 2.1
DHFR-203ENST00000505337 ADCY5O95622 1261 aa28.2■■■□□ 2.1
DHFR-203ENST00000505337 ITGBL1O95965 494 aaPredicted RBP28.2■■■□□ 2.1
DHFR-203ENST00000505337 SNHG28P0DPA3 235 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms