RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 YARSP54577 528 aaKnown RBP4.24□□□□□ -1.73
HMGB1P35-201ENST00000503360 TSNAXIP1Q2TAA8 658 aa4.24□□□□□ -1.73
HMGB1P35-201ENST00000503360 DIEXFQ68CQ4 756 aaKnown RBP4.24□□□□□ -1.73
HMGB1P35-201ENST00000503360 AGMOQ6ZNB7 445 aa4.24□□□□□ -1.73
HMGB1P35-201ENST00000503360 CCDC84Q86UT8 332 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P35-201ENST00000503360 ZDHHC14Q8IZN3 488 aa4.24□□□□□ -1.73
HMGB1P35-201ENST00000503360 NLGN1Q8N2Q7 840 aa4.24□□□□□ -1.73
HMGB1P35-201ENST00000503360 SYTL5Q8TDW5 730 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P35-201ENST00000503360 CRELD1Q96HD1 420 aa4.24□□□□□ -1.73
HMGB1P35-201ENST00000503360 MAP6Q96JE9 813 aa4.24□□□□□ -1.73
HMGB1P35-201ENST00000503360 DPH2Q9BQC3 489 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P35-201ENST00000503360 C1QTNF3-AMACRE9PGA6 284 aa4.23□□□□□ -1.73
HMGB1P35-201ENST00000503360 SUV39H1O43463 412 aa4.23□□□□□ -1.73
HMGB1P35-201ENST00000503360 ENDOUP21128 410 aaKnown RBP4.23□□□□□ -1.73
HMGB1P35-201ENST00000503360 RPL6Q02878 288 aaKnown RBP4.23□□□□□ -1.73
HMGB1P35-201ENST00000503360 FMR1Q06787 632 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB1P35-201ENST00000503360 PUM1Q14671 1186 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB1P35-201ENST00000503360 CBX2Q14781 532 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P35-201ENST00000503360 LDHDQ86WU2 507 aa4.23□□□□□ -1.73
HMGB1P35-201ENST00000503360 IGDCC3Q8IVU1 814 aa4.23□□□□□ -1.73
HMGB1P35-201ENST00000503360 TP53I13Q8NBR0 393 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P35-201ENST00000503360 DAGLBQ8NCG7 672 aa4.23□□□□□ -1.73
HMGB1P35-201ENST00000503360 GPR20Q99678 358 aa4.23□□□□□ -1.73
HMGB1P35-201ENST00000503360 BDH2Q9BUT1 245 aa4.23□□□□□ -1.73
HMGB1P35-201ENST00000503360 IRS2Q9Y4H2 1338 aa4.22□□□□□ -1.73
HMGB1P35-201ENST00000503360 K7ESM1 405 aa4.22□□□□□ -1.73
HMGB1P35-201ENST00000503360 AKAP8O43823 692 aaKnown RBP4.22□□□□□ -1.73
HMGB1P35-201ENST00000503360 EFEMP2O95967 443 aa4.22□□□□□ -1.73
HMGB1P35-201ENST00000503360 MPOP05164 745 aa4.22□□□□□ -1.73
HMGB1P35-201ENST00000503360 RLBP1P12271 317 aa4.22□□□□□ -1.73
HMGB1P35-201ENST00000503360 TNFRSF1AP19438 455 aa4.22□□□□□ -1.73
HMGB1P35-201ENST00000503360 LMNB1P20700 586 aa4.22□□□□□ -1.73
HMGB1P35-201ENST00000503360 MAPK1P28482 360 aa4.22□□□□□ -1.73
HMGB1P35-201ENST00000503360 LAPTM5Q13571 262 aa4.22□□□□□ -1.73
HMGB1P35-201ENST00000503360 RTP5Q14D33 572 aa4.22□□□□□ -1.73
HMGB1P35-201ENST00000503360 SLC14A2Q15849 920 aa4.22□□□□□ -1.73
HMGB1P35-201ENST00000503360 ZNF827Q17R98 1081 aa4.22□□□□□ -1.73
HMGB1P35-201ENST00000503360 SYT8Q8NBV8 401 aa4.22□□□□□ -1.73
HMGB1P35-201ENST00000503360 PWWP2AQ96N64 755 aa4.22□□□□□ -1.73
HMGB1P35-201ENST00000503360 ADAM7Q9H2U9 754 aa4.22□□□□□ -1.73
HMGB1P35-201ENST00000503360 PCDHA5Q9Y5H7 936 aa4.22□□□□□ -1.73
HMGB1P35-201ENST00000503360 PRR36Q9H6K5 1346 aa4.21□□□□□ -1.73
HMGB1P35-201ENST00000503360 USP17L7P0C7H9 530 aa4.21□□□□□ -1.74
HMGB1P35-201ENST00000503360 ARL4AP40617 200 aa4.21□□□□□ -1.74
HMGB1P35-201ENST00000503360 MAGEA10P43363 369 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P35-201ENST00000503360 KCNC1P48547 511 aa4.21□□□□□ -1.74
HMGB1P35-201ENST00000503360 GALNT18Q6P9A2 607 aa4.21□□□□□ -1.74
HMGB1P35-201ENST00000503360 ZNF655Q8N720 491 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P35-201ENST00000503360 LINC00116Q8NCU8 138 aa4.21□□□□□ -1.74
HMGB1P35-201ENST00000503360 RGS22Q8NE09 1264 aa4.21□□□□□ -1.74
HMGB1P35-201ENST00000503360 MIR1-1HGQ9H1L0 117 aa4.21□□□□□ -1.74
HMGB1P35-201ENST00000503360 KLHL14Q9P2G3 628 aa4.21□□□□□ -1.74
HMGB1P35-201ENST00000503360 TNFRSF10DQ9UBN6 386 aa4.21□□□□□ -1.74
HMGB1P35-201ENST00000503360 IGFBP6P24592 240 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P35-201ENST00000503360 ATP2B2Q01814 1243 aa4.2□□□□□ -1.74
HMGB1P35-201ENST00000503360 SEPT6Q14141 434 aa4.2□□□□□ -1.74
HMGB1P35-201ENST00000503360 CLEC16AQ2KHT3 1053 aa4.2□□□□□ -1.74
HMGB1P35-201ENST00000503360 DNAJC14Q6Y2X3 702 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P35-201ENST00000503360 CEP128Q6ZU80 1094 aa4.2□□□□□ -1.74
HMGB1P35-201ENST00000503360 USHBP1Q8N6Y0 703 aa4.2□□□□□ -1.74
HMGB1P35-201ENST00000503360 VWCEQ96DN2 955 aa4.2□□□□□ -1.74
HMGB1P35-201ENST00000503360 KREMEN1Q96MU8 473 aa4.2□□□□□ -1.74
HMGB1P35-201ENST00000503360 C1QTNF3Q9BXJ4 246 aa4.2□□□□□ -1.74
HMGB1P35-201ENST00000503360 HDAC8Q9BY41 377 aa4.2□□□□□ -1.74
HMGB1P35-201ENST00000503360 ASCC2Q9H1I8 757 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P35-201ENST00000503360 TTF2Q9UNY4 1162 aaKnown RBP4.2□□□□□ -1.74
HMGB1P35-201ENST00000503360 SHISA3A0PJX4 238 aa4.19□□□□□ -1.74
HMGB1P35-201ENST00000503360 TMEM82A0PJX8 343 aa4.19□□□□□ -1.74
HMGB1P35-201ENST00000503360 ANKRD33BA6NCL7 494 aa4.19□□□□□ -1.74
HMGB1P35-201ENST00000503360 WTIPA6NIX2 430 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P35-201ENST00000503360 FFAR3O14843 346 aa4.19□□□□□ -1.74
HMGB1P35-201ENST00000503360 PRICKLE3O43900 615 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P35-201ENST00000503360 USP2O75604 605 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P35-201ENST00000503360 SLURP1P55000 103 aa4.19□□□□□ -1.74
HMGB1P35-201ENST00000503360 PCBP3P57721 371 aaKnown RBP4.19□□□□□ -1.74
HMGB1P35-201ENST00000503360 ZXDAP98168 799 aa4.19□□□□□ -1.74
HMGB1P35-201ENST00000503360 KRTAP1-1Q07627 177 aa4.19□□□□□ -1.74
HMGB1P35-201ENST00000503360 UBXN11Q5T124 520 aa4.19□□□□□ -1.74
HMGB1P35-201ENST00000503360 ZSCAN29Q8IWY8 852 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P35-201ENST00000503360 SIRT2Q8IXJ6 389 aa4.19□□□□□ -1.74
HMGB1P35-201ENST00000503360 TTC9BQ8N6N2 239 aa4.19□□□□□ -1.74
HMGB1P35-201ENST00000503360 FAM13CQ8NE31 585 aa4.19□□□□□ -1.74
HMGB1P35-201ENST00000503360 HHIPL1Q96JK4 782 aa4.19□□□□□ -1.74
HMGB1P35-201ENST00000503360 SRRDQ9UH36 339 aa4.19□□□□□ -1.74
HMGB1P35-201ENST00000503360 ZMYM5Q9UJ78 669 aa4.19□□□□□ -1.74
HMGB1P35-201ENST00000503360 PCDHB5Q9Y5E4 795 aa4.19□□□□□ -1.74
HMGB1P35-201ENST00000503360 LRRN2O75325 713 aa4.18□□□□□ -1.74
HMGB1P35-201ENST00000503360 PLCG1P19174 1290 aa4.18□□□□□ -1.74
HMGB1P35-201ENST00000503360 ERCC3P19447 782 aa4.18□□□□□ -1.74
HMGB1P35-201ENST00000503360 RPL10P27635 214 aaKnown RBP4.18□□□□□ -1.74
HMGB1P35-201ENST00000503360 LIG3P49916 1009 aa4.18□□□□□ -1.74
HMGB1P35-201ENST00000503360 RTP1P59025 263 aa4.18□□□□□ -1.74
HMGB1P35-201ENST00000503360 ADAM17P78536 824 aa4.18□□□□□ -1.74
HMGB1P35-201ENST00000503360 NMIQ13287 307 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P35-201ENST00000503360 NR1I3Q14994 352 aa4.18□□□□□ -1.74
HMGB1P35-201ENST00000503360 TARBP2Q15633 366 aaKnown RBP4.18□□□□□ -1.74
HMGB1P35-201ENST00000503360 CCDC85BQ15834 202 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P35-201ENST00000503360 VMACQ2NL98 169 aa4.18□□□□□ -1.74
HMGB1P35-201ENST00000503360 WAPLQ7Z5K2 1190 aa4.18□□□□□ -1.74
HMGB1P35-201ENST00000503360 FCRL2Q96LA5 508 aaPredicted RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms