RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 GRIA2P42262 883 aa7.35□□□□□ -1.23
HMGB1P3-201ENST00000502802 PREPP48147 710 aa7.35□□□□□ -1.23
HMGB1P3-201ENST00000502802 CT47A1Q5JQC4 288 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P3-201ENST00000502802 CDH24Q86UP0 819 aa7.35□□□□□ -1.23
HMGB1P3-201ENST00000502802 JAMLQ86YT9 394 aa7.35□□□□□ -1.23
HMGB1P3-201ENST00000502802 TRIM59Q8IWR1 403 aa7.35□□□□□ -1.23
HMGB1P3-201ENST00000502802 ARHGEF39Q8N4T4 335 aa7.35□□□□□ -1.23
HMGB1P3-201ENST00000502802 SVOPQ8N4V2 548 aa7.35□□□□□ -1.23
HMGB1P3-201ENST00000502802 RIN3Q8TB24 985 aa7.35□□□□□ -1.23
HMGB1P3-201ENST00000502802 OSBP2Q969R2 916 aa7.35□□□□□ -1.23
HMGB1P3-201ENST00000502802 FBXL18Q96ME1 805 aa7.35□□□□□ -1.23
HMGB1P3-201ENST00000502802 ASPNQ9BXN1 380 aa7.35□□□□□ -1.23
HMGB1P3-201ENST00000502802 CEP41Q9BYV8 373 aa7.35□□□□□ -1.23
HMGB1P3-201ENST00000502802 AKTIPQ9H8T0 292 aa7.35□□□□□ -1.23
HMGB1P3-201ENST00000502802 FBXL21Q9UKT6 434 aa7.35□□□□□ -1.23
HMGB1P3-201ENST00000502802 PCDHB12Q9Y5F1 795 aa7.35□□□□□ -1.23
HMGB1P3-201ENST00000502802 TBX1O43435 398 aa7.34□□□□□ -1.23
HMGB1P3-201ENST00000502802 GAS2O43903 313 aaKnown RBP7.34□□□□□ -1.23
HMGB1P3-201ENST00000502802 SLITRK5O94991 958 aa7.34□□□□□ -1.23
HMGB1P3-201ENST00000502802 ALX3O95076 343 aa7.34□□□□□ -1.23
HMGB1P3-201ENST00000502802 ETV3P41162 512 aa7.34□□□□□ -1.23
HMGB1P3-201ENST00000502802 NOL9Q5SY16 702 aaKnown RBP7.34□□□□□ -1.23
HMGB1P3-201ENST00000502802 LCE2CQ5TA81 110 aa7.34□□□□□ -1.23
HMGB1P3-201ENST00000502802 SHISA2Q6UWI4 295 aa7.34□□□□□ -1.23
HMGB1P3-201ENST00000502802 RNF180Q86T96 592 aa7.34□□□□□ -1.23
HMGB1P3-201ENST00000502802 PRPF38AQ8NAV1 312 aaKnown RBP7.34□□□□□ -1.23
HMGB1P3-201ENST00000502802 ADCY4Q8NFM4 1077 aa7.34□□□□□ -1.23
HMGB1P3-201ENST00000502802 RNF141Q8WVD5 230 aa7.34□□□□□ -1.23
HMGB1P3-201ENST00000502802 IER2Q9BTL4 223 aa7.34□□□□□ -1.23
HMGB1P3-201ENST00000502802 YIPF2Q9BWQ6 316 aa7.34□□□□□ -1.23
HMGB1P3-201ENST00000502802 FAM126AQ9BYI3 521 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P3-201ENST00000502802 HOMER2Q9NSB8 354 aa7.34□□□□□ -1.23
HMGB1P3-201ENST00000502802 INTS7Q9NVH2 962 aaKnown RBP7.34□□□□□ -1.23
HMGB1P3-201ENST00000502802 MAGEC2Q9UBF1 373 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P3-201ENST00000502802 MAPRE3Q9UPY8 281 aa7.34□□□□□ -1.23
HMGB1P3-201ENST00000502802 DAGLAQ9Y4D2 1042 aa7.34□□□□□ -1.23
HMGB1P3-201ENST00000502802 S100BP04271 92 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P3-201ENST00000502802 SDSP20132 328 aa7.33□□□□□ -1.24
HMGB1P3-201ENST00000502802 POU3F3P20264 500 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P3-201ENST00000502802 ZNF445P59923 1031 aa7.33□□□□□ -1.24
HMGB1P3-201ENST00000502802 MAP7Q14244 749 aa7.33□□□□□ -1.24
HMGB1P3-201ENST00000502802 GRIK4Q16099 956 aa7.33□□□□□ -1.24
HMGB1P3-201ENST00000502802 NBPF9Q3BBW0 867 aa7.33□□□□□ -1.24
HMGB1P3-201ENST00000502802 TRIM61Q5EBN2 209 aa7.33□□□□□ -1.24
HMGB1P3-201ENST00000502802 CDPF1Q6NVV7 123 aa7.33□□□□□ -1.24
HMGB1P3-201ENST00000502802 NOL8Q76FK4 1167 aaKnown RBP7.33□□□□□ -1.24
HMGB1P3-201ENST00000502802 FERMT3Q86UX7 667 aa7.33□□□□□ -1.24
HMGB1P3-201ENST00000502802 PSMG3-AS1Q96PY0 264 aa7.33□□□□□ -1.24
HMGB1P3-201ENST00000502802 SEMA6CQ9H3T2 930 aa7.33□□□□□ -1.24
HMGB1P3-201ENST00000502802 NOP53Q9NZM5 478 aaKnown RBP7.33□□□□□ -1.24
HMGB1P3-201ENST00000502802 CGGBP1Q9UFW8 167 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P3-201ENST00000502802 DIS3Q9Y2L1 958 aaKnown RBP7.33□□□□□ -1.24
HMGB1P3-201ENST00000502802 GSG1L2A8MUP6 293 aa7.32□□□□□ -1.24
HMGB1P3-201ENST00000502802 WFS1O76024 890 aa7.32□□□□□ -1.24
HMGB1P3-201ENST00000502802 ARHGEF15O94989 841 aa7.32□□□□□ -1.24
HMGB1P3-201ENST00000502802 KCNH1O95259 989 aa7.32□□□□□ -1.24
HMGB1P3-201ENST00000502802 PARNO95453 639 aaKnown RBP7.32□□□□□ -1.24
HMGB1P3-201ENST00000502802 NFICP08651 508 aa7.32□□□□□ -1.24
HMGB1P3-201ENST00000502802 CDKN1CP49918 316 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P3-201ENST00000502802 NFKB2Q00653 900 aa7.32□□□□□ -1.24
HMGB1P3-201ENST00000502802 CNNM4Q6P4Q7 775 aa7.32□□□□□ -1.24
HMGB1P3-201ENST00000502802 Q6ZS46 218 aa7.32□□□□□ -1.24
HMGB1P3-201ENST00000502802 LRRTM3Q86VH5 581 aa7.32□□□□□ -1.24
HMGB1P3-201ENST00000502802 DDX42Q86XP3 938 aaKnown RBP eCLIP7.32□□□□□ -1.24
HMGB1P3-201ENST00000502802 SYTL5Q8TDW5 730 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P3-201ENST00000502802 FBLIM1Q8WUP2 373 aa7.32□□□□□ -1.24
HMGB1P3-201ENST00000502802 BTN2A2Q8WVV5 523 aa7.32□□□□□ -1.24
HMGB1P3-201ENST00000502802 EZH1Q92800 747 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P3-201ENST00000502802 LENG1Q96BZ8 264 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P3-201ENST00000502802 TARS2Q9BW92 718 aaKnown RBP7.32□□□□□ -1.24
HMGB1P3-201ENST00000502802 LGR6Q9HBX8 967 aa7.32□□□□□ -1.24
HMGB1P3-201ENST00000502802 PRDM10Q9NQV6 1147 aa7.32□□□□□ -1.24
HMGB1P3-201ENST00000502802 PRR13Q9NZ81 148 aa7.32□□□□□ -1.24
HMGB1P3-201ENST00000502802 SFMBT1Q9UHJ3 866 aa7.32□□□□□ -1.24
HMGB1P3-201ENST00000502802 USP21Q9UK80 565 aa7.32□□□□□ -1.24
HMGB1P3-201ENST00000502802 FHOD1Q9Y613 1164 aa7.32□□□□□ -1.24
HMGB1P3-201ENST00000502802 DLX3O60479 287 aa7.31□□□□□ -1.24
HMGB1P3-201ENST00000502802 EFCAB14O75071 495 aa7.31□□□□□ -1.24
HMGB1P3-201ENST00000502802 C6orf222P0C671 652 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P3-201ENST00000502802 GLB1P16278 677 aa7.31□□□□□ -1.24
HMGB1P3-201ENST00000502802 CYP7A1P22680 504 aa7.31□□□□□ -1.24
HMGB1P3-201ENST00000502802 HOXC12P31275 282 aa7.31□□□□□ -1.24
HMGB1P3-201ENST00000502802 EVA1CP58658 441 aa7.31□□□□□ -1.24
HMGB1P3-201ENST00000502802 GABREP78334 506 aa7.31□□□□□ -1.24
HMGB1P3-201ENST00000502802 GTF2IRD2BQ6EKJ0 949 aa7.31□□□□□ -1.24
HMGB1P3-201ENST00000502802 GTF2IRD2Q86UP8 949 aa7.31□□□□□ -1.24
HMGB1P3-201ENST00000502802 UBR7Q8N806 425 aa7.31□□□□□ -1.24
HMGB1P3-201ENST00000502802 KCTD13Q8WZ19 329 aa7.31□□□□□ -1.24
HMGB1P3-201ENST00000502802 DDX1Q92499 740 aaKnown RBP7.31□□□□□ -1.24
HMGB1P3-201ENST00000502802 BRF1Q92994 677 aa7.31□□□□□ -1.24
HMGB1P3-201ENST00000502802 CCDC140Q96MF4 163 aa7.31□□□□□ -1.24
HMGB1P3-201ENST00000502802 PRDM14Q9GZV8 571 aa7.31□□□□□ -1.24
HMGB1P3-201ENST00000502802 NOL6Q9H6R4 1146 aaKnown RBP7.31□□□□□ -1.24
HMGB1P3-201ENST00000502802 MCM8Q9UJA3 840 aa7.31□□□□□ -1.24
HMGB1P3-201ENST00000502802 GRB10Q13322 594 aa7.3□□□□□ -1.24
HMGB1P3-201ENST00000502802 PPP2R5DQ14738 602 aa7.3□□□□□ -1.24
HMGB1P3-201ENST00000502802 SGO2Q562F6 1265 aa7.3□□□□□ -1.24
HMGB1P3-201ENST00000502802 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P3-201ENST00000502802 AHI1Q8N157 1196 aa7.3□□□□□ -1.24
HMGB1P3-201ENST00000502802 FIBCD1Q8N539 461 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms