RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 M0R082 166 aa5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 SOX1O00570 391 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 FSCN2O14926 492 aa5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 GRIN3BO60391 1043 aa5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 EYA4O95677 639 aa5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 F2P00734 622 aa5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 LDHCP07864 332 aa5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 IFIT2P09913 472 aaKnown RBP5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 TRAPPC10P48553 1259 aa5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 PIN1Q13526 163 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 GAS6Q14393 721 aa5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 FAM83BQ5T0W9 1011 aa5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 FAM102BQ5T8I3 360 aa5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 EFCAB2Q5VUJ9 269 aa5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 WWC2Q6AWC2 1192 aa5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 CNNM4Q6P4Q7 775 aa5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 TCEAL8Q8IYN2 117 aa5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 KLHL23Q8NBE8 558 aa5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 ZNF417Q8TAU3 575 aa5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 MTMR8Q96EF0 704 aa5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 ZNF587Q96SQ5 575 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 TARS2Q9BW92 718 aaKnown RBP5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 COL25A1Q9BXS0 654 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 AS3MTQ9HBK9 375 aa5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 RAD18Q9NS91 495 aa5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 KRT82Q9NSB4 513 aa5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 ZNRF3Q9ULT6 936 aa5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 CD109Q6YHK3 1445 aa5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 RAPGEF3O95398 923 aa5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 FAM163BP0C2L3 166 aa5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 SLFN14P0C7P3 912 aa5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 EPXP11678 715 aa5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 MAOBP27338 520 aa5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 NLRP12P59046 1061 aa5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 SRSF11Q05519 484 aaKnown RBP5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 GFOD2Q3B7J2 385 aa5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 TMEM67Q5HYA8 995 aa5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 MRM1Q6IN84 353 aaKnown RBP5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 C6orf15Q6UXA7 325 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 DGKHQ86XP1 1220 aa5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 MAGEB6Q8N7X4 407 aa5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 C1orf131Q8NDD1 294 aaKnown RBP5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 RIN3Q8TB24 985 aa5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 STK35Q8TDR2 534 aa5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 GPBAR1Q8TDU6 330 aa5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 GAL3ST3Q96A11 431 aa5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 TIFAQ96CG3 184 aa5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 CLUHP3Q96NS8 147 aa5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 CARD10Q9BWT7 1032 aa5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 SLC5A4Q9NY91 659 aa5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 ZNF180Q9UJW8 692 aa5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 PPP2R3BQ9Y5P8 575 aa5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 SLC12A7Q9Y666 1083 aa5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 PHLDB1Q86UU1 1377 aa5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 NEO1Q92859 1461 aa5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 CDK13Q14004 1512 aaKnown RBP5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 FRMPD1Q5SYB0 1578 aa5.37□□□□□ -1.55
HMGB1P21-201ENST00000502313 CCDC163A0A0D9SF12 145 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 PRAMEF27A3QJZ7 478 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 GOLGA6CA6NDK9 693 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 GOLGA6BA6NDN3 693 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 H3BM21 787 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 ALBP02768 609 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 HSP90AA1P07900 732 aaKnown RBP5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 GOLGA6DP0CG33 693 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 COL6A1P12109 1028 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 SERPINB3P29508 390 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 L1CAMP32004 1257 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 CLCQ05315 142 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 ZNF252P-AS1Q0IIN9 211 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 SIM2Q14190 667 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 SUZ12Q15022 739 aaKnown RBP5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 CCDC184Q52MB2 194 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 RASIP1Q5U651 963 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 NXNQ6DKJ4 435 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 RUFY4Q6ZNE9 571 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 LSRQ86X29 649 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 PASD1Q8IV76 773 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 FAM178BQ8IXR5 827 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 IRF7Q92985 503 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 RUNDC1Q96C34 613 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 SPATA9Q9BWV2 254 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 TRIM8Q9BZR9 551 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 OBP2AQ9NY56 170 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 GOLGA6AQ9NYA3 693 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 USP25Q9UHP3 1055 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 MAPRE3Q9UPY8 281 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 SNCAIPQ9Y6H5 919 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 PLCH2O75038 1416 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 TEX14Q8IWB6 1497 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 KDM6BO15054 1643 aa5.36□□□□□ -1.55
HMGB1P21-201ENST00000502313 TTC37Q6PGP7 1564 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 FYCO1Q9BQS8 1478 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 CLIP1P30622 1438 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 TROQ12816 1431 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 DYTNA2CJ06 578 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 VSTM5A8MXK1 200 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 EPB41L2O43491 1005 aaKnown RBP5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 SLC26A4O43511 780 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms